RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 CCL17Q92583 94 aa15.87■□□□□ 0.13
PRPF40B-206ENST00000547764 SLC30A2Q9BRI3 323 aa15.87■□□□□ 0.13
PRPF40B-206ENST00000547764 REPIN1Q9BWE0 567 aaKnown RBP15.87■□□□□ 0.13
PRPF40B-206ENST00000547764 YAE1D1Q9NRH1 226 aa15.87■□□□□ 0.13
PRPF40B-206ENST00000547764 DNAJC27Q9NZQ0 273 aa15.87■□□□□ 0.13
PRPF40B-206ENST00000547764 LAMP5Q9UJQ1 280 aa15.87■□□□□ 0.13
PRPF40B-206ENST00000547764 ORC6Q9Y5N6 252 aa15.87■□□□□ 0.13
PRPF40B-206ENST00000547764 SLC22A31A6NKX4 558 aa15.86■□□□□ 0.13
PRPF40B-206ENST00000547764 H0YL77 283 aa15.86■□□□□ 0.13
PRPF40B-206ENST00000547764 WNT9BO14905 357 aa15.86■□□□□ 0.13
PRPF40B-206ENST00000547764 APOC1P02654 83 aa15.86■□□□□ 0.13
PRPF40B-206ENST00000547764 ANXA2P07355 339 aaKnown RBP15.86■□□□□ 0.13
PRPF40B-206ENST00000547764 HOXB4P17483 251 aaPredicted RBP15.86■□□□□ 0.13
PRPF40B-206ENST00000547764 GZMKP49863 264 aa15.86■□□□□ 0.13
PRPF40B-206ENST00000547764 ZNF121P58317 390 aaPredicted RBP15.86■□□□□ 0.13
PRPF40B-206ENST00000547764 C6orf52Q5T4I8 152 aa15.86■□□□□ 0.13
PRPF40B-206ENST00000547764 LRRN1Q6UXK5 716 aa15.86■□□□□ 0.13
PRPF40B-206ENST00000547764 PRSS45Q7RTY3 260 aa15.86■□□□□ 0.13
PRPF40B-206ENST00000547764 OR10AD1Q8NGE0 317 aa15.86■□□□□ 0.13
PRPF40B-206ENST00000547764 ITLN1Q8WWA0 313 aa15.86■□□□□ 0.13
PRPF40B-206ENST00000547764 SOX7Q9BT81 388 aa15.86■□□□□ 0.13
PRPF40B-206ENST00000547764 C9orf16Q9BUW7 83 aa15.86■□□□□ 0.13
PRPF40B-206ENST00000547764 NARFLQ9H6Q4 476 aa15.86■□□□□ 0.13
PRPF40B-206ENST00000547764 TMEM100Q9NV29 134 aa15.86■□□□□ 0.13
PRPF40B-206ENST00000547764 IL19Q9UHD0 177 aa15.86■□□□□ 0.13
PRPF40B-206ENST00000547764 SONP18583 2426 aaKnown RBP15.86■□□□□ 0.13
PRPF40B-206ENST00000547764 A0A1B0GWJ7 208 aa15.85■□□□□ 0.13
PRPF40B-206ENST00000547764 CD300LBA8K4G0 201 aa15.85■□□□□ 0.13
PRPF40B-206ENST00000547764 CLDN25C9JDP6 229 aa15.85■□□□□ 0.13
PRPF40B-206ENST00000547764 MLNRO43193 412 aa15.85■□□□□ 0.13
PRPF40B-206ENST00000547764 TBX1O43435 398 aa15.85■□□□□ 0.13
PRPF40B-206ENST00000547764 XRCC2O43543 280 aa15.85■□□□□ 0.13
PRPF40B-206ENST00000547764 BAG2O95816 211 aa15.85■□□□□ 0.13
PRPF40B-206ENST00000547764 TNFRSF1AP19438 455 aa15.85■□□□□ 0.13
PRPF40B-206ENST00000547764 RAD23AP54725 363 aa15.85■□□□□ 0.13
PRPF40B-206ENST00000547764 MVKQ03426 396 aa15.85■□□□□ 0.13
PRPF40B-206ENST00000547764 HNRNPA0Q13151 305 aaKnown RBP15.85■□□□□ 0.13
PRPF40B-206ENST00000547764 ZIK1Q3SY52 487 aaPredicted RBP15.85■□□□□ 0.13
PRPF40B-206ENST00000547764 AVPI1Q5T686 147 aa15.85■□□□□ 0.13
PRPF40B-206ENST00000547764 FAM57BQ71RH2 274 aa15.85■□□□□ 0.13
PRPF40B-206ENST00000547764 GID4Q8IVV7 300 aa15.85■□□□□ 0.13
PRPF40B-206ENST00000547764 OR8J1Q8NGP2 316 aa15.85■□□□□ 0.13
PRPF40B-206ENST00000547764 CLDND2Q8NHS1 167 aa15.85■□□□□ 0.13
PRPF40B-206ENST00000547764 SPRYD4Q8WW59 207 aaPredicted RBP15.85■□□□□ 0.13
PRPF40B-206ENST00000547764 HPS1Q92902 700 aa15.85■□□□□ 0.13
PRPF40B-206ENST00000547764 STMN2Q93045 179 aa15.85■□□□□ 0.13
PRPF40B-206ENST00000547764 SPSB4Q96A44 273 aa15.85■□□□□ 0.13
PRPF40B-206ENST00000547764 MSI2Q96DH6 328 aaKnown RBP15.85■□□□□ 0.13
PRPF40B-206ENST00000547764 OR2V2Q96R30 315 aa15.85■□□□□ 0.13
PRPF40B-206ENST00000547764 CNN2Q99439 309 aaKnown RBP15.85■□□□□ 0.13
PRPF40B-206ENST00000547764 SLC29A1Q99808 456 aa15.85■□□□□ 0.13
PRPF40B-206ENST00000547764 SP140LQ9H930 580 aa15.85■□□□□ 0.13
PRPF40B-206ENST00000547764 BRD7Q9NPI1 651 aa15.85■□□□□ 0.13
PRPF40B-206ENST00000547764 COPS3Q9UNS2 423 aa15.85■□□□□ 0.13
PRPF40B-206ENST00000547764 GGT3PA6NGU5 568 aa15.84■□□□□ 0.13
PRPF40B-206ENST00000547764 HLA-DPB1P04440 258 aa15.84■□□□□ 0.13
PRPF40B-206ENST00000547764 ZNF16P17020 682 aaPredicted RBP15.84■□□□□ 0.13
PRPF40B-206ENST00000547764 RBMXP38159 391 aaKnown RBP15.84■□□□□ 0.13
PRPF40B-206ENST00000547764 CDC42P60953 191 aa15.84■□□□□ 0.13
PRPF40B-206ENST00000547764 KRT77Q7Z794 578 aa15.84■□□□□ 0.13
PRPF40B-206ENST00000547764 OR52H1Q8NGJ2 320 aa15.84■□□□□ 0.13
PRPF40B-206ENST00000547764 SGK3Q96BR1 496 aa15.84■□□□□ 0.13
PRPF40B-206ENST00000547764 HRASLS5Q96KN8 279 aa15.84■□□□□ 0.13
PRPF40B-206ENST00000547764 OPA3Q9H6K4 179 aa15.84■□□□□ 0.13
PRPF40B-206ENST00000547764 ADGRL4Q9HBW9 690 aa15.84■□□□□ 0.13
PRPF40B-206ENST00000547764 DCAF16Q9NXF7 216 aa15.84■□□□□ 0.13
PRPF40B-206ENST00000547764 HAO2Q9NYQ3 351 aa15.84■□□□□ 0.13
PRPF40B-206ENST00000547764 ZNF319Q9P2F9 582 aa15.84■□□□□ 0.13
PRPF40B-206ENST00000547764 WIPI2Q9Y4P8 454 aa15.84■□□□□ 0.13
PRPF40B-206ENST00000547764 LRP12Q9Y561 859 aa15.84■□□□□ 0.13
PRPF40B-206ENST00000547764 TMEM14AQ9Y6G1 99 aa15.84■□□□□ 0.13
PRPF40B-206ENST00000547764 A8MV72 311 aaPredicted RBP15.83■□□□□ 0.12
PRPF40B-206ENST00000547764 PRR32B1ATL7 298 aa15.83■□□□□ 0.12
PRPF40B-206ENST00000547764 E9PQ18 207 aa15.83■□□□□ 0.12
PRPF40B-206ENST00000547764 F5H5P2 479 aa15.83■□□□□ 0.12
PRPF40B-206ENST00000547764 PSMD9O00233 223 aa15.83■□□□□ 0.12
PRPF40B-206ENST00000547764 SLC3A1Q07837 685 aa15.83■□□□□ 0.12
PRPF40B-206ENST00000547764 TIGD6Q17RP2 521 aa15.83■□□□□ 0.12
PRPF40B-206ENST00000547764 KCTD18Q6PI47 426 aaPredicted RBP15.83■□□□□ 0.12
PRPF40B-206ENST00000547764 ZBTB49Q6ZSB9 765 aa15.83■□□□□ 0.12
PRPF40B-206ENST00000547764 FAM81AQ8TBF8 368 aa15.83■□□□□ 0.12
PRPF40B-206ENST00000547764 RAB1CQ92928 201 aa15.83■□□□□ 0.12
PRPF40B-206ENST00000547764 UBE2FQ969M7 185 aa15.83■□□□□ 0.12
PRPF40B-206ENST00000547764 EME1Q96AY2 570 aa15.83■□□□□ 0.12
PRPF40B-206ENST00000547764 TIMD4Q96H15 378 aa15.83■□□□□ 0.12
PRPF40B-206ENST00000547764 PGAM5Q96HS1 289 aa15.83■□□□□ 0.12
PRPF40B-206ENST00000547764 MEGF10Q96KG7 1140 aa15.83■□□□□ 0.12
PRPF40B-206ENST00000547764 NIPAL2Q9H841 368 aa15.83■□□□□ 0.12
PRPF40B-206ENST00000547764 TMEM106BQ9NUM4 274 aa15.83■□□□□ 0.12
PRPF40B-206ENST00000547764 WARS2Q9UGM6 360 aaKnown RBP15.83■□□□□ 0.12
PRPF40B-206ENST00000547764 PPP1R3CQ9UQK1 317 aa15.83■□□□□ 0.12
PRPF40B-206ENST00000547764 TANC2Q9HCD6 1990 aa15.82■□□□□ 0.12
PRPF40B-206ENST00000547764 DYSFO75923 2080 aa15.82■□□□□ 0.12
PRPF40B-206ENST00000547764 MALRD1Q5VYJ5 2156 aa15.82■□□□□ 0.12
PRPF40B-206ENST00000547764 LOC100289279A0A1B0GTE1 492 aa15.82■□□□□ 0.12
PRPF40B-206ENST00000547764 ANKRD65E5RJM6 399 aa15.82■□□□□ 0.12
PRPF40B-206ENST00000547764 CA6P23280 308 aa15.82■□□□□ 0.12
PRPF40B-206ENST00000547764 HTR1FP30939 366 aa15.82■□□□□ 0.12
PRPF40B-206ENST00000547764 SRP9P49458 86 aaKnown RBP15.82■□□□□ 0.12
PRPF40B-206ENST00000547764 PSMA6P60900 246 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms