RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 CSNK2A1P68400 391 aaPredicted RBP13.11□□□□□ -0.31
HOXC11-202ENST00000546378 RAB32Q13637 225 aa13.11□□□□□ -0.31
HOXC11-202ENST00000546378 LANCL3Q6ZV70 420 aa13.11□□□□□ -0.31
HOXC11-202ENST00000546378 LRRC18Q8N456 261 aa13.11□□□□□ -0.31
HOXC11-202ENST00000546378 CSNK2A3Q8NEV1 391 aa13.11□□□□□ -0.31
HOXC11-202ENST00000546378 BAHD1Q8TBE0 780 aaPredicted RBP13.11□□□□□ -0.31
HOXC11-202ENST00000546378 ASB5Q8WWX0 329 aa13.11□□□□□ -0.31
HOXC11-202ENST00000546378 DYRK2Q92630 601 aa13.11□□□□□ -0.31
HOXC11-202ENST00000546378 ARL11Q969Q4 196 aa13.11□□□□□ -0.31
HOXC11-202ENST00000546378 HAO2Q9NYQ3 351 aa13.11□□□□□ -0.31
HOXC11-202ENST00000546378 A6NLC8 198 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 AGTR1P30556 359 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 SGCAQ16586 387 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 ARHGAP21Q5T5U3 1957 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 ZNF318Q5VUA4 2279 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 OR2A2Q6IF42 318 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 KLHL24Q6TFL4 600 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 OR6K3Q8NGY3 331 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 OTOSQ8NHW6 89 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 SLC2A12Q8TD20 617 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 ST7LQ8TDW4 575 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 PIGTQ969N2 578 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 STACQ99469 402 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 SULT4A1Q9BR01 284 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 FBRSQ9HAH7 460 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 SCPEP1Q9HB40 452 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 HHLA2Q9UM44 414 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 SLC5A6Q9Y289 635 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 A0A0J9YY10 115 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 TMEM150CB9EJG8 249 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 SLC17A2O00624 439 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 BCL2L11O43521 198 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 IL5P05113 134 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 PTGFRP43088 359 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 ACY1Q03154 408 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 CLEC12BQ2HXU8 276 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 DRAM2Q6UX65 266 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 ACOT7LQ6ZUV0 252 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 SGK3Q96BR1 496 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 LIN37Q96GY3 246 aaPredicted RBP13.1□□□□□ -0.31
HOXC11-202ENST00000546378 WDR77Q9BQA1 342 aaPredicted RBP13.1□□□□□ -0.31
HOXC11-202ENST00000546378 UBQLN4Q9NRR5 601 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 OR52A1Q9UKL2 312 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 MMP24Q9Y5R2 645 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 BCKDHBP21953 392 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 KCTD18Q6PI47 426 aaPredicted RBP13.1□□□□□ -0.31
HOXC11-202ENST00000546378 GLIPR1L1Q6UWM5 242 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 RAB11FIP2Q7L804 512 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 HSD17B13Q7Z5P4 300 aaPredicted RBP13.1□□□□□ -0.31
HOXC11-202ENST00000546378 NAA40Q86UY6 237 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 OR5M8Q8NGP6 311 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 HDHD3Q9BSH5 251 aaPredicted RBP13.1□□□□□ -0.31
HOXC11-202ENST00000546378 BCL2L14Q9BZR8 327 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 PITHD1Q9GZP4 211 aaPredicted RBP13.1□□□□□ -0.31
HOXC11-202ENST00000546378 EHFQ9NZC4 300 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 KCNK7Q9Y2U2 307 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 AUP1Q9Y679 476 aa13.1□□□□□ -0.31
HOXC11-202ENST00000546378 ARPC4-TTLL3A0A0A6YYG9 625 aa13.09□□□□□ -0.31
HOXC11-202ENST00000546378 C9orf170A2RU37 121 aa13.09□□□□□ -0.31
HOXC11-202ENST00000546378 HSPB6O14558 160 aa13.09□□□□□ -0.31
HOXC11-202ENST00000546378 NSA2O95478 260 aaKnown RBP13.09□□□□□ -0.31
HOXC11-202ENST00000546378 PSMB6P28072 239 aa13.09□□□□□ -0.31
HOXC11-202ENST00000546378 RAB38P57729 211 aa13.09□□□□□ -0.31
HOXC11-202ENST00000546378 INSM1Q01101 510 aaPredicted RBP13.09□□□□□ -0.31
HOXC11-202ENST00000546378 RASGEF1BQ0VAM2 473 aa13.09□□□□□ -0.31
HOXC11-202ENST00000546378 FAM24BQ8N5W8 94 aa13.09□□□□□ -0.31
HOXC11-202ENST00000546378 NUDT9Q9BW91 350 aa13.09□□□□□ -0.31
HOXC11-202ENST00000546378 LAT2Q9GZY6 243 aa13.09□□□□□ -0.31
HOXC11-202ENST00000546378 CTDSPLO15194 276 aa13.09□□□□□ -0.31
HOXC11-202ENST00000546378 AHSA1O95433 338 aa13.09□□□□□ -0.31
HOXC11-202ENST00000546378 SFTA3P0C7M3 94 aa13.09□□□□□ -0.31
HOXC11-202ENST00000546378 MUC1P15941 1255 aaPredicted RBP13.09□□□□□ -0.31
HOXC11-202ENST00000546378 NOVA1P51513 510 aaKnown RBP13.09□□□□□ -0.31
HOXC11-202ENST00000546378 PHLDA2Q53GA4 152 aa13.09□□□□□ -0.31
HOXC11-202ENST00000546378 ADAT3Q96EY9 351 aaPredicted RBP13.09□□□□□ -0.31
HOXC11-202ENST00000546378 KLHDC7BQ96G42 594 aa13.09□□□□□ -0.31
HOXC11-202ENST00000546378 PRO3102Q9H379 93 aa13.09□□□□□ -0.31
HOXC11-202ENST00000546378 RHOFQ9HBH0 211 aa13.09□□□□□ -0.31
HOXC11-202ENST00000546378 MRPL22Q9NWU5 206 aaKnown RBP13.09□□□□□ -0.31
HOXC11-202ENST00000546378 A0A0D9SG52 128 aa13.08□□□□□ -0.31
HOXC11-202ENST00000546378 HMSDA8MTL9 139 aa13.08□□□□□ -0.31
HOXC11-202ENST00000546378 TPT1P13693 172 aaKnown RBP13.08□□□□□ -0.31
HOXC11-202ENST00000546378 NME1P15531 152 aaKnown RBP13.08□□□□□ -0.31
HOXC11-202ENST00000546378 CD53P19397 219 aa13.08□□□□□ -0.31
HOXC11-202ENST00000546378 OR3A4PP47883 348 aa13.08□□□□□ -0.31
HOXC11-202ENST00000546378 F2RL1P55085 397 aa13.08□□□□□ -0.31
HOXC11-202ENST00000546378 ASPHD2Q6ICH7 369 aa13.08□□□□□ -0.31
HOXC11-202ENST00000546378 UNQ9370/PRO34162Q6UXP9 181 aa13.08□□□□□ -0.31
HOXC11-202ENST00000546378 MEX3BQ6ZN04 569 aaKnown RBP13.08□□□□□ -0.31
HOXC11-202ENST00000546378 CDC20BQ86Y33 519 aa13.08□□□□□ -0.31
HOXC11-202ENST00000546378 BAP18Q8IXM2 172 aa13.08□□□□□ -0.31
HOXC11-202ENST00000546378 MRPS17Q9Y2R5 130 aaKnown RBP13.08□□□□□ -0.31
HOXC11-202ENST00000546378 SULT1B1O43704 296 aa13.08□□□□□ -0.32
HOXC11-202ENST00000546378 IGHV4-34P06331 123 aa13.08□□□□□ -0.32
HOXC11-202ENST00000546378 GLO1Q04760 184 aa13.08□□□□□ -0.32
HOXC11-202ENST00000546378 C4orf17Q53FE4 359 aa13.08□□□□□ -0.32
HOXC11-202ENST00000546378 FAM57BQ71RH2 274 aa13.08□□□□□ -0.32
HOXC11-202ENST00000546378 ADGRE4PQ86SQ3 457 aa13.08□□□□□ -0.32
HOXC11-202ENST00000546378 ZSCAN4Q8NAM6 433 aaPredicted RBP13.08□□□□□ -0.32
HOXC11-202ENST00000546378 IP6K3Q96PC2 410 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms