RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 LYNP07948 512 aa10.04□□□□□ -0.8
YBX3-217ENST00000546164 ALOX5APP20292 161 aa10.04□□□□□ -0.8
YBX3-217ENST00000546164 ANOS1P23352 680 aa10.04□□□□□ -0.8
YBX3-217ENST00000546164 LMO4P61968 165 aa10.04□□□□□ -0.8
YBX3-217ENST00000546164 ZNF92Q03936 586 aa10.04□□□□□ -0.8
YBX3-217ENST00000546164 APOFQ13790 326 aa10.04□□□□□ -0.8
YBX3-217ENST00000546164 LCN1P1Q5VSP4 162 aa10.04□□□□□ -0.8
YBX3-217ENST00000546164 PRSS45Q7RTY3 260 aa10.04□□□□□ -0.8
YBX3-217ENST00000546164 MRPL21Q7Z2W9 205 aaKnown RBP10.04□□□□□ -0.8
YBX3-217ENST00000546164 OR5AS1Q8N127 324 aa10.04□□□□□ -0.8
YBX3-217ENST00000546164 LINC01356Q8N9X3 169 aa10.04□□□□□ -0.8
YBX3-217ENST00000546164 CCL17Q92583 94 aa10.04□□□□□ -0.8
YBX3-217ENST00000546164 RAB1CQ92928 201 aa10.04□□□□□ -0.8
YBX3-217ENST00000546164 SPSB4Q96A44 273 aa10.04□□□□□ -0.8
YBX3-217ENST00000546164 OR2V2Q96R30 315 aa10.04□□□□□ -0.8
YBX3-217ENST00000546164 AMELYQ99218 206 aa10.04□□□□□ -0.8
YBX3-217ENST00000546164 TEAD3Q99594 435 aa10.04□□□□□ -0.8
YBX3-217ENST00000546164 PKP2Q99959 881 aa10.04□□□□□ -0.8
YBX3-217ENST00000546164 RBM4BQ9BQ04 359 aaKnown RBP10.04□□□□□ -0.8
YBX3-217ENST00000546164 YIPF3Q9GZM5 350 aa10.04□□□□□ -0.8
YBX3-217ENST00000546164 SLC22A4Q9H015 551 aa10.04□□□□□ -0.8
YBX3-217ENST00000546164 SP140LQ9H930 580 aa10.04□□□□□ -0.8
YBX3-217ENST00000546164 TMEM106BQ9NUM4 274 aa10.04□□□□□ -0.8
YBX3-217ENST00000546164 TMEM100Q9NV29 134 aa10.04□□□□□ -0.8
YBX3-217ENST00000546164 CDC42EP3Q9UKI2 254 aa10.04□□□□□ -0.8
YBX3-217ENST00000546164 KCNS2Q9ULS6 477 aa10.04□□□□□ -0.8
YBX3-217ENST00000546164 DNHD1Q96M86 4753 aa10.04□□□□□ -0.8
YBX3-217ENST00000546164 C5orf63A6NC05 138 aa10.03□□□□□ -0.8
YBX3-217ENST00000546164 CD300LBA8K4G0 201 aa10.03□□□□□ -0.8
YBX3-217ENST00000546164 B4DSR2 109 aa10.03□□□□□ -0.8
YBX3-217ENST00000546164 XRCC2O43543 280 aa10.03□□□□□ -0.8
YBX3-217ENST00000546164 TGFAP01135 160 aa10.03□□□□□ -0.8
YBX3-217ENST00000546164 HSD11B1P28845 292 aa10.03□□□□□ -0.8
YBX3-217ENST00000546164 NAA10P41227 235 aaPredicted RBP10.03□□□□□ -0.8
YBX3-217ENST00000546164 CX3CR1P49238 355 aa10.03□□□□□ -0.8
YBX3-217ENST00000546164 SRP9P49458 86 aaKnown RBP10.03□□□□□ -0.8
YBX3-217ENST00000546164 RPS7P62081 194 aaKnown RBP10.03□□□□□ -0.8
YBX3-217ENST00000546164 MVKQ03426 396 aa10.03□□□□□ -0.8
YBX3-217ENST00000546164 GLYATL3Q5SZD4 288 aa10.03□□□□□ -0.8
YBX3-217ENST00000546164 AADACL4Q5VUY2 407 aa10.03□□□□□ -0.8
YBX3-217ENST00000546164 NXNL2Q5VZ03 156 aa10.03□□□□□ -0.8
YBX3-217ENST00000546164 SPATC1Q76KD6 591 aa10.03□□□□□ -0.8
YBX3-217ENST00000546164 SLC16A9Q7RTY1 509 aa10.03□□□□□ -0.8
YBX3-217ENST00000546164 CELF2-AS1Q8N7Q2 184 aa10.03□□□□□ -0.8
YBX3-217ENST00000546164 OR10AD1Q8NGE0 317 aa10.03□□□□□ -0.8
YBX3-217ENST00000546164 OR52H1Q8NGJ2 320 aa10.03□□□□□ -0.8
YBX3-217ENST00000546164 TMEM163Q8TC26 289 aa10.03□□□□□ -0.8
YBX3-217ENST00000546164 SPRYD4Q8WW59 207 aaPredicted RBP10.03□□□□□ -0.8
YBX3-217ENST00000546164 ITLN1Q8WWA0 313 aa10.03□□□□□ -0.8
YBX3-217ENST00000546164 MEGF10Q96KG7 1140 aa10.03□□□□□ -0.8
YBX3-217ENST00000546164 NIPAL2Q9H841 368 aa10.03□□□□□ -0.8
YBX3-217ENST00000546164 HAO2Q9NYQ3 351 aa10.03□□□□□ -0.8
YBX3-217ENST00000546164 USE1Q9NZ43 259 aa10.03□□□□□ -0.8
YBX3-217ENST00000546164 MRPL15Q9P015 296 aaKnown RBP10.03□□□□□ -0.8
YBX3-217ENST00000546164 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.03□□□□□ -0.8
YBX3-217ENST00000546164 LPAR3Q9UBY5 353 aa10.03□□□□□ -0.8
YBX3-217ENST00000546164 KLHDC2Q9Y2U9 406 aa10.03□□□□□ -0.8
YBX3-217ENST00000546164 NOP16Q9Y3C1 178 aaKnown RBP10.03□□□□□ -0.8
YBX3-217ENST00000546164 MXRA5Q9NR99 2828 aa10.03□□□□□ -0.8
YBX3-217ENST00000546164 SAC3D1A6NKF1 404 aa10.02□□□□□ -0.81
YBX3-217ENST00000546164 SLC22A31A6NKX4 558 aa10.02□□□□□ -0.81
YBX3-217ENST00000546164 PTBP3O95758 552 aaKnown RBP10.02□□□□□ -0.81
YBX3-217ENST00000546164 ALPLP05186 524 aa10.02□□□□□ -0.81
YBX3-217ENST00000546164 H2BFMP0C1H6 154 aa10.02□□□□□ -0.81
YBX3-217ENST00000546164 SLC2A1P11166 492 aa10.02□□□□□ -0.81
YBX3-217ENST00000546164 DDOSTP39656 456 aa10.02□□□□□ -0.81
YBX3-217ENST00000546164 GATA4P43694 442 aa10.02□□□□□ -0.81
YBX3-217ENST00000546164 MMP16P51512 607 aa10.02□□□□□ -0.81
YBX3-217ENST00000546164 DVL1P1P54792 670 aaPredicted RBP10.02□□□□□ -0.81
YBX3-217ENST00000546164 ZNF181Q2M3W8 571 aa10.02□□□□□ -0.81
YBX3-217ENST00000546164 CHRFAM7AQ494W8 412 aa10.02□□□□□ -0.81
YBX3-217ENST00000546164 AVPI1Q5T686 147 aa10.02□□□□□ -0.81
YBX3-217ENST00000546164 DEGS2Q6QHC5 323 aa10.02□□□□□ -0.81
YBX3-217ENST00000546164 MEPCEQ7L2J0 689 aaKnown RBP10.02□□□□□ -0.81
YBX3-217ENST00000546164 PEG10Q86TG7 708 aaKnown RBP10.02□□□□□ -0.81
YBX3-217ENST00000546164 TCEANCQ8N8B7 351 aa10.02□□□□□ -0.81
YBX3-217ENST00000546164 BHLHE23Q8NDY6 225 aa10.02□□□□□ -0.81
YBX3-217ENST00000546164 OR2AE1Q8NHA4 323 aa10.02□□□□□ -0.81
YBX3-217ENST00000546164 THEM6Q8WUY1 208 aa10.02□□□□□ -0.81
YBX3-217ENST00000546164 RAB3IPQ96QF0 476 aaPredicted RBP10.02□□□□□ -0.81
YBX3-217ENST00000546164 SIGLEC11Q96RL6 698 aa10.02□□□□□ -0.81
YBX3-217ENST00000546164 RGCCQ9H4X1 137 aa10.02□□□□□ -0.81
YBX3-217ENST00000546164 NARFLQ9H6Q4 476 aa10.02□□□□□ -0.81
YBX3-217ENST00000546164 GCM1Q9NP62 436 aa10.02□□□□□ -0.81
YBX3-217ENST00000546164 TREM2Q9NZC2 230 aa10.02□□□□□ -0.81
YBX3-217ENST00000546164 PPP1R3CQ9UQK1 317 aa10.02□□□□□ -0.81
YBX3-217ENST00000546164 NPTNQ9Y639 398 aa10.02□□□□□ -0.81
YBX3-217ENST00000546164 TMEM14AQ9Y6G1 99 aa10.02□□□□□ -0.81
YBX3-217ENST00000546164 TANC2Q9HCD6 1990 aa10.01□□□□□ -0.81
YBX3-217ENST00000546164 GGT3PA6NGU5 568 aa10.01□□□□□ -0.81
YBX3-217ENST00000546164 FAM157AC9JC47 383 aa10.01□□□□□ -0.81
YBX3-217ENST00000546164 F5H5P2 479 aa10.01□□□□□ -0.81
YBX3-217ENST00000546164 H0YL77 283 aa10.01□□□□□ -0.81
YBX3-217ENST00000546164 M0R129 80 aa10.01□□□□□ -0.81
YBX3-217ENST00000546164 FSTL3O95633 263 aa10.01□□□□□ -0.81
YBX3-217ENST00000546164 IGHV2-70P01814 119 aa10.01□□□□□ -0.81
YBX3-217ENST00000546164 IGHV2-5P01817 119 aa10.01□□□□□ -0.81
YBX3-217ENST00000546164 ANXA2P07355 339 aaKnown RBP10.01□□□□□ -0.81
YBX3-217ENST00000546164 PCMT1P22061 227 aa10.01□□□□□ -0.81
YBX3-217ENST00000546164 CFL1P23528 166 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms