RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 SPACA6W5XKT8 324 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 ROS1P08922 2347 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 TENM1Q9UKZ4 2725 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 EPPK1P58107 5090 aaKnown RBP2.24□□□□□ -2.05
SNHG1-224ENST00000545688 A6NIZ1 184 aa2.23□□□□□ -2.05
SNHG1-224ENST00000545688 IDSB3KWA1 339 aa2.23□□□□□ -2.05
SNHG1-224ENST00000545688 E7EQ34 232 aa2.23□□□□□ -2.05
SNHG1-224ENST00000545688 KMOO15229 486 aa2.23□□□□□ -2.05
SNHG1-224ENST00000545688 ANGPTL7O43827 346 aa2.23□□□□□ -2.05
SNHG1-224ENST00000545688 KERAO60938 352 aa2.23□□□□□ -2.05
SNHG1-224ENST00000545688 PALMO75781 387 aa2.23□□□□□ -2.05
SNHG1-224ENST00000545688 YEATS4O95619 227 aa2.23□□□□□ -2.05
SNHG1-224ENST00000545688 C6orf47O95873 294 aa2.23□□□□□ -2.05
SNHG1-224ENST00000545688 SERPINA7P05543 415 aa2.23□□□□□ -2.05
SNHG1-224ENST00000545688 RRASP10301 218 aa2.23□□□□□ -2.05
SNHG1-224ENST00000545688 EPB41P11171 864 aaKnown RBP2.23□□□□□ -2.05
SNHG1-224ENST00000545688 COX6A1P12074 109 aa2.23□□□□□ -2.05
SNHG1-224ENST00000545688 HSPA9P38646 679 aaKnown RBP2.23□□□□□ -2.05
SNHG1-224ENST00000545688 PEX19P40855 299 aa2.23□□□□□ -2.05
SNHG1-224ENST00000545688 RAP1BP61224 184 aa2.23□□□□□ -2.05
SNHG1-224ENST00000545688 ARG2P78540 354 aa2.23□□□□□ -2.05
SNHG1-224ENST00000545688 LDLRAP1Q5SW96 308 aa2.23□□□□□ -2.05
SNHG1-224ENST00000545688 MLIPQ5VWP3 458 aa2.23□□□□□ -2.05
SNHG1-224ENST00000545688 PDPK2PQ6A1A2 396 aa2.23□□□□□ -2.05
SNHG1-224ENST00000545688 C11orf71Q6IPW1 123 aa2.23□□□□□ -2.05
SNHG1-224ENST00000545688 RWDD4Q6NW29 188 aaKnown RBP2.23□□□□□ -2.05
SNHG1-224ENST00000545688 CCDC137Q6PK04 289 aaKnown RBP2.23□□□□□ -2.05
SNHG1-224ENST00000545688 C16orf47Q6ZP98 133 aaPredicted RBP2.23□□□□□ -2.05
SNHG1-224ENST00000545688 TMEM17Q86X19 198 aa2.23□□□□□ -2.05
SNHG1-224ENST00000545688 FAM71AQ8IYT1 594 aa2.23□□□□□ -2.05
SNHG1-224ENST00000545688 RPRMLQ8N4K4 120 aa2.23□□□□□ -2.05
SNHG1-224ENST00000545688 NPWQ8N729 165 aa2.23□□□□□ -2.05
SNHG1-224ENST00000545688 GPR26Q8NDV2 337 aa2.23□□□□□ -2.05
SNHG1-224ENST00000545688 OR56B1Q8NGI3 324 aa2.23□□□□□ -2.05
SNHG1-224ENST00000545688 OR51G2Q8NGK0 314 aa2.23□□□□□ -2.05
SNHG1-224ENST00000545688 FAM57AQ8TBR7 257 aa2.23□□□□□ -2.05
SNHG1-224ENST00000545688 GIPC3Q8TF64 312 aa2.23□□□□□ -2.05
SNHG1-224ENST00000545688 RMND5BQ96G75 393 aaPredicted RBP2.23□□□□□ -2.05
SNHG1-224ENST00000545688 LINC00477Q96M19 166 aa2.23□□□□□ -2.05
SNHG1-224ENST00000545688 NPAS2Q99743 824 aa2.23□□□□□ -2.05
SNHG1-224ENST00000545688 PLA2G12AQ9BZM1 189 aa2.23□□□□□ -2.05
SNHG1-224ENST00000545688 KIR3DX1Q9H7L2 352 aa2.23□□□□□ -2.05
SNHG1-224ENST00000545688 ZNF430Q9H8G1 570 aaPredicted RBP2.23□□□□□ -2.05
SNHG1-224ENST00000545688 TRIM45Q9H8W5 580 aaPredicted RBP2.23□□□□□ -2.05
SNHG1-224ENST00000545688 ROPN1Q9HAT0 212 aaPredicted RBP2.23□□□□□ -2.05
SNHG1-224ENST00000545688 STMN3Q9NZ72 180 aa2.23□□□□□ -2.05
SNHG1-224ENST00000545688 DHCR7Q9UBM7 475 aaKnown RBP2.23□□□□□ -2.05
SNHG1-224ENST00000545688 FETUBQ9UGM5 382 aa2.23□□□□□ -2.05
SNHG1-224ENST00000545688 AP1M2Q9Y6Q5 423 aa2.23□□□□□ -2.05
SNHG1-224ENST00000545688 RYR2Q92736 4967 aa2.23□□□□□ -2.05
SNHG1-224ENST00000545688 IGHV1-45A0A0A0MS14 117 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 OR6C74A6NCV1 312 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 TRIM64A6NGJ6 449 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 TRIM64BA6NI03 449 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 BTN3A3O00478 584 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 PRKYO43930 277 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 UGT2B17O75795 530 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 TSPAN12O95859 305 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 OPN1LWP04000 364 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 IGF1P05019 195 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 SYT1P21579 422 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 HCAR3P49019 387 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 PRKXP51817 358 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 AIF1P55008 147 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 KRTAP12-4P60329 112 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 RPL26P61254 145 aaKnown RBP2.22□□□□□ -2.05
SNHG1-224ENST00000545688 CBX3Q13185 183 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 SYCP1Q15431 976 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 SLC25A35Q3KQZ1 300 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 TMEM255AQ5JRV8 349 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 TMEM205Q6UW68 189 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 TMIGD1Q6UXZ0 262 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 NDUFAF7Q7L592 441 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 OOSP2Q86WS3 158 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 ARRDC1Q8N5I2 433 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 TRAM1L1Q8N609 369 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 FAM71CQ8NEG0 241 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 JOSD2Q8TAC2 188 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 NANPQ8TBE9 248 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 RXFP2Q8WXD0 754 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 RPL3LQ92901 407 aaKnown RBP2.22□□□□□ -2.05
SNHG1-224ENST00000545688 CXorf40BQ96DE9 158 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 VPS35Q96QK1 796 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 TRIB3Q96RU7 358 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 SELENOIQ9C0D9 397 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 OR2AG1Q9H205 316 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 ZNF160Q9HCG1 818 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 YAE1D1Q9NRH1 226 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 CTSFQ9UBX1 484 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 NXT1Q9UKK6 140 aaKnown RBP2.22□□□□□ -2.05
SNHG1-224ENST00000545688 NPIPA1Q9UND3 350 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 RPL26L1Q9UNX3 145 aaKnown RBP2.22□□□□□ -2.05
SNHG1-224ENST00000545688 FAM215AQ9Y5M1 114 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 ZNF407Q9C0G0 2248 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 NUP210LQ5VU65 1888 aa2.22□□□□□ -2.05
SNHG1-224ENST00000545688 RYR1P21817 5038 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 IGKV1D-8A0A087WSZ0 117 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 IGHV2-70DA0A0C4DH43 119 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 KIR2DS1A0A191URI9 304 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 A0A1B0GX78 115 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms