RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 IRF2P14316 349 aa12.49□□□□□ -0.41
CLSTN3-216ENST00000545663 HOXB6P17509 224 aaKnown RBP12.49□□□□□ -0.41
CLSTN3-216ENST00000545663 CDH12P55289 794 aa12.49□□□□□ -0.41
CLSTN3-216ENST00000545663 DCTN2Q13561 401 aaKnown RBP12.49□□□□□ -0.41
CLSTN3-216ENST00000545663 MPPED2Q15777 294 aa12.49□□□□□ -0.41
CLSTN3-216ENST00000545663 C10orf128Q5T292 105 aa12.49□□□□□ -0.41
CLSTN3-216ENST00000545663 C1orf94Q6P1W5 598 aa12.49□□□□□ -0.41
CLSTN3-216ENST00000545663 METAP1DQ6UB28 335 aaPredicted RBP12.49□□□□□ -0.41
CLSTN3-216ENST00000545663 Q8N7P7 452 aa12.49□□□□□ -0.41
CLSTN3-216ENST00000545663 OR8G5Q8NG78 346 aa12.49□□□□□ -0.41
CLSTN3-216ENST00000545663 PTP4A1Q93096 173 aa12.49□□□□□ -0.41
CLSTN3-216ENST00000545663 AJUBAQ96IF1 538 aa12.49□□□□□ -0.41
CLSTN3-216ENST00000545663 SEPHS2Q99611 448 aa12.49□□□□□ -0.41
CLSTN3-216ENST00000545663 DCTN5Q9BTE1 182 aa12.49□□□□□ -0.41
CLSTN3-216ENST00000545663 WNT10AQ9GZT5 417 aa12.49□□□□□ -0.41
CLSTN3-216ENST00000545663 LSM4Q9Y4Z0 139 aaKnown RBP12.49□□□□□ -0.41
CLSTN3-216ENST00000545663 TIMM10BQ9Y5J6 103 aa12.49□□□□□ -0.41
CLSTN3-216ENST00000545663 M0QX08 132 aa12.48□□□□□ -0.41
CLSTN3-216ENST00000545663 TPST2O60704 377 aa12.48□□□□□ -0.41
CLSTN3-216ENST00000545663 DNAJC8O75937 253 aaPredicted RBP12.48□□□□□ -0.41
CLSTN3-216ENST00000545663 CH25HO95992 272 aa12.48□□□□□ -0.41
CLSTN3-216ENST00000545663 KDELR2P33947 212 aa12.48□□□□□ -0.41
CLSTN3-216ENST00000545663 HTR5AP47898 357 aa12.48□□□□□ -0.41
CLSTN3-216ENST00000545663 BMXP51813 675 aa12.48□□□□□ -0.41
CLSTN3-216ENST00000545663 ZNF133P52736 654 aaPredicted RBP12.48□□□□□ -0.41
CLSTN3-216ENST00000545663 CD83Q01151 205 aa12.48□□□□□ -0.41
CLSTN3-216ENST00000545663 MAB21L1Q13394 359 aa12.48□□□□□ -0.41
CLSTN3-216ENST00000545663 OR1Q1Q15612 314 aa12.48□□□□□ -0.41
CLSTN3-216ENST00000545663 FAM27BQ5VT28 67 aa12.48□□□□□ -0.41
CLSTN3-216ENST00000545663 PRAMEF6Q5VXH4 476 aa12.48□□□□□ -0.41
CLSTN3-216ENST00000545663 Q6ZS46 218 aa12.48□□□□□ -0.41
CLSTN3-216ENST00000545663 BHLHE23Q8NDY6 225 aa12.48□□□□□ -0.41
CLSTN3-216ENST00000545663 SLC7A13Q8TCU3 470 aa12.48□□□□□ -0.41
CLSTN3-216ENST00000545663 ST8SIA4Q92187 359 aa12.48□□□□□ -0.41
CLSTN3-216ENST00000545663 SLC7A6Q92536 515 aa12.48□□□□□ -0.41
CLSTN3-216ENST00000545663 TNFRSF14Q92956 283 aa12.48□□□□□ -0.41
CLSTN3-216ENST00000545663 MCUR1Q96AQ8 359 aa12.48□□□□□ -0.41
CLSTN3-216ENST00000545663 GORASP2Q9H8Y8 452 aa12.48□□□□□ -0.41
CLSTN3-216ENST00000545663 PTTG3PQ9NZH4 202 aa12.48□□□□□ -0.41
CLSTN3-216ENST00000545663 CD300AQ9UGN4 299 aa12.48□□□□□ -0.41
CLSTN3-216ENST00000545663 RPS6KA6Q9UK32 745 aa12.48□□□□□ -0.41
CLSTN3-216ENST00000545663 PLECQ15149 4684 aaKnown RBP12.48□□□□□ -0.41
CLSTN3-216ENST00000545663 A0A0B4J2E0 115 aa12.47□□□□□ -0.41
CLSTN3-216ENST00000545663 A0A1B0GW55 424 aa12.47□□□□□ -0.41
CLSTN3-216ENST00000545663 A0A1B0GX12 115 aa12.47□□□□□ -0.41
CLSTN3-216ENST00000545663 CXCR6O00574 342 aa12.47□□□□□ -0.41
CLSTN3-216ENST00000545663 TPST1O60507 370 aa12.47□□□□□ -0.41
CLSTN3-216ENST00000545663 MT-ATP6P00846 226 aa12.47□□□□□ -0.41
CLSTN3-216ENST00000545663 GYPAP02724 150 aa12.47□□□□□ -0.41
CLSTN3-216ENST00000545663 DUX4L2P0CJ85 424 aa12.47□□□□□ -0.41
CLSTN3-216ENST00000545663 DUX4L3P0CJ86 424 aa12.47□□□□□ -0.41
CLSTN3-216ENST00000545663 DUX4L4P0CJ87 422 aa12.47□□□□□ -0.41
CLSTN3-216ENST00000545663 DUX4L5P0CJ88 424 aa12.47□□□□□ -0.41
CLSTN3-216ENST00000545663 DUX4L6P0CJ89 424 aa12.47□□□□□ -0.41
CLSTN3-216ENST00000545663 DUX4L7P0CJ90 424 aa12.47□□□□□ -0.41
CLSTN3-216ENST00000545663 RAC2P15153 192 aa12.47□□□□□ -0.41
CLSTN3-216ENST00000545663 FAHP16930 419 aa12.47□□□□□ -0.41
CLSTN3-216ENST00000545663 AQP1P29972 269 aa12.47□□□□□ -0.41
CLSTN3-216ENST00000545663 PRSS12P56730 875 aa12.47□□□□□ -0.41
CLSTN3-216ENST00000545663 ELF3P78545 371 aaPredicted RBP12.47□□□□□ -0.41
CLSTN3-216ENST00000545663 ZNF74Q16587 644 aa12.47□□□□□ -0.41
CLSTN3-216ENST00000545663 TCTEX1D4Q5JR98 221 aa12.47□□□□□ -0.41
CLSTN3-216ENST00000545663 DUX4L9Q6RFH8 374 aaPredicted RBP12.47□□□□□ -0.41
CLSTN3-216ENST00000545663 LY6G5BQ8NDX9 201 aa12.47□□□□□ -0.41
CLSTN3-216ENST00000545663 Q8NFD4 153 aa12.47□□□□□ -0.41
CLSTN3-216ENST00000545663 TFAP2CQ92754 450 aa12.47□□□□□ -0.41
CLSTN3-216ENST00000545663 FAM162AQ96A26 154 aa12.47□□□□□ -0.41
CLSTN3-216ENST00000545663 NMD3Q96D46 503 aaKnown RBP12.47□□□□□ -0.41
CLSTN3-216ENST00000545663 TMEM43Q9BTV4 400 aa12.47□□□□□ -0.41
CLSTN3-216ENST00000545663 PCDHAC1Q9H158 963 aa12.47□□□□□ -0.41
CLSTN3-216ENST00000545663 SELENONQ9NZV5 590 aa12.47□□□□□ -0.41
CLSTN3-216ENST00000545663 DUX4Q9UBX2 424 aa12.47□□□□□ -0.41
CLSTN3-216ENST00000545663 SAMD4AQ9UPU9 718 aaKnown RBP12.47□□□□□ -0.41
CLSTN3-216ENST00000545663 SNX13Q9Y5W8 968 aa12.47□□□□□ -0.41
CLSTN3-216ENST00000545663 LGALS8O00214 317 aa12.46□□□□□ -0.41
CLSTN3-216ENST00000545663 ACADSP16219 412 aa12.46□□□□□ -0.41
CLSTN3-216ENST00000545663 IFNA8P32881 189 aa12.46□□□□□ -0.41
CLSTN3-216ENST00000545663 NCALDP61601 193 aa12.46□□□□□ -0.41
CLSTN3-216ENST00000545663 GUCA2AQ02747 115 aa12.46□□□□□ -0.41
CLSTN3-216ENST00000545663 TRIM25Q14258 630 aaKnown RBP12.46□□□□□ -0.41
CLSTN3-216ENST00000545663 OR8B8Q15620 311 aa12.46□□□□□ -0.41
CLSTN3-216ENST00000545663 TMEM95Q3KNT9 176 aa12.46□□□□□ -0.41
CLSTN3-216ENST00000545663 GLYATQ6IB77 296 aa12.46□□□□□ -0.41
CLSTN3-216ENST00000545663 Q8N2B8 174 aa12.46□□□□□ -0.41
CLSTN3-216ENST00000545663 OR51G2Q8NGK0 314 aa12.46□□□□□ -0.41
CLSTN3-216ENST00000545663 OR11L1Q8NGX0 322 aa12.46□□□□□ -0.41
CLSTN3-216ENST00000545663 Q8TCH9 128 aa12.46□□□□□ -0.41
CLSTN3-216ENST00000545663 PIFOQ8TCI5 191 aa12.46□□□□□ -0.41
CLSTN3-216ENST00000545663 ASB10Q8WXI3 467 aa12.46□□□□□ -0.41
CLSTN3-216ENST00000545663 DPF1Q92782 380 aa12.46□□□□□ -0.41
CLSTN3-216ENST00000545663 SLC7A6OSQ96CW6 309 aaPredicted RBP12.46□□□□□ -0.41
CLSTN3-216ENST00000545663 ZNF582Q96NG8 517 aaPredicted RBP12.46□□□□□ -0.41
CLSTN3-216ENST00000545663 THTPAQ9BU02 230 aa12.46□□□□□ -0.41
CLSTN3-216ENST00000545663 CDCA4Q9BXL8 241 aa12.46□□□□□ -0.41
CLSTN3-216ENST00000545663 FAM234AQ9H0X4 552 aa12.46□□□□□ -0.41
CLSTN3-216ENST00000545663 RAB18Q9NP72 206 aa12.46□□□□□ -0.41
CLSTN3-216ENST00000545663 ACTR3BQ9P1U1 418 aa12.46□□□□□ -0.41
CLSTN3-216ENST00000545663 FMO6PO60774 539 aa12.45□□□□□ -0.42
CLSTN3-216ENST00000545663 ECDO95905 644 aaPredicted RBP12.45□□□□□ -0.42
CLSTN3-216ENST00000545663 SCG5P05408 212 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms