RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 OR52P1PQ8NH57 321 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 ZNF420Q8TAQ5 688 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-220ENST00000544550 FBXO25Q8TCJ0 367 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 DNAJA4Q8WW22 397 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-220ENST00000544550 DDB2Q92466 427 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 NPIPB3Q92617 1050 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 PTP4A1Q93096 173 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 TAAR8Q969N4 342 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 TXNDC15Q96J42 360 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 C4orf45Q96LM5 186 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 RCHY1Q96PM5 261 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 ZNF607Q96SK3 696 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 SSX3Q99909 188 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 CDCA4Q9BXL8 241 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 CCDC134Q9H6E4 229 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 SIAEQ9HAT2 523 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 LIN7CQ9NUP9 197 aaKnown RBP3.31□□□□□ -1.88
SNHG1-220ENST00000544550 SLC17A7Q9P2U7 560 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 MARCOQ9UEW3 520 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-220ENST00000544550 PPP2R2CQ9Y2T4 447 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 IFT52Q9Y366 437 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 UBE2J1Q9Y385 318 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-220ENST00000544550 TSSC4Q9Y5U2 329 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-220ENST00000544550 HEATR1Q9H583 2144 aaKnown RBP3.31□□□□□ -1.88
SNHG1-220ENST00000544550 DNAH1Q9P2D7 4330 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 DYNC2H1Q8NCM8 4307 aaKnown RBP3.3□□□□□ -1.88
SNHG1-220ENST00000544550 LOC100509620A0A075B734 347 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 TRAV38-1A0A0B4J264 116 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 PRSS51A0A1B0GVH4 220 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 TMEM247A6NEH6 219 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 PLPP3O14495 311 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 ADAM20O43506 726 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 RNF13O43567 381 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 SERPINI2O75830 405 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 HPRP00739 348 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 VIMP08670 466 aaKnown RBP3.3□□□□□ -1.88
SNHG1-220ENST00000544550 NPSP0C0P6 89 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 CCDC159P0C7I6 412 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 PGA4P0DJD7 388 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 PGA3P0DJD8 388 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 ADORA3P0DMS8 318 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 COX5BP10606 129 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 ETFAP13804 333 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 ZNF32P17041 273 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 CBLP22681 906 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 SAA4P35542 130 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 GUCA1AP43080 201 aaPredicted RBP3.3□□□□□ -1.88
SNHG1-220ENST00000544550 UBE2E1P51965 193 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 CRISP3P54108 245 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 FAM3BP58499 235 aaPredicted RBP3.3□□□□□ -1.88
SNHG1-220ENST00000544550 DNAJB13P59910 316 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 MRPS34P82930 218 aaKnown RBP3.3□□□□□ -1.88
SNHG1-220ENST00000544550 C2orf54Q08AI8 447 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 HNRNPA0Q13151 305 aaKnown RBP3.3□□□□□ -1.88
SNHG1-220ENST00000544550 LY6EQ16553 131 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 RUNDC3AQ59EK9 446 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 RNASE12Q5GAN4 147 aaKnown RBP3.3□□□□□ -1.88
SNHG1-220ENST00000544550 ALG10BQ5I7T1 473 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 C10orf128Q5T292 105 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 IL23RQ5VWK5 629 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 FAM91A1Q658Y4 838 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 ZFAND6Q6FIF0 208 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 DGAT2L7PQ6IED9 249 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 ULK3Q6PHR2 472 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 KCTD18Q6PI47 426 aaPredicted RBP3.3□□□□□ -1.88
SNHG1-220ENST00000544550 C16orf89Q6UX73 402 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 LYPD2Q6UXB3 125 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 ZYG11AQ6WRX3 759 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 WDR88Q6ZMY6 472 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 ZNF836Q6ZNA1 936 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 TIFABQ6ZNK6 161 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 Q6ZR03 302 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 SLC35D2Q76EJ3 337 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 PIGWQ7Z7B1 504 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 SERPINA11Q86U17 422 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 NUDCD3Q8IVD9 361 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 CPOQ8IVL8 374 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 RIMKLAQ8IXN7 391 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 LRRC34Q8IZ02 419 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 CLECL1Q8IZS7 167 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 CLEC4FQ8N1N0 589 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 SLC35F6Q8N357 371 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 KRTCAP2Q8N6L1 136 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 C10orf53Q8N6V4 93 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 LSMEM1Q8N8F7 131 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 ANKFN1Q8N957 763 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 FNDC5Q8NAU1 212 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 OR5L1Q8NGL2 311 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 OR5J2Q8NH18 312 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 ACMSDQ8TDX5 336 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 WIPF2Q8TF74 440 aaPredicted RBP3.3□□□□□ -1.88
SNHG1-220ENST00000544550 TWIST2Q8WVJ9 160 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 GLMPQ8WWB7 406 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 MCHR2Q969V1 340 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 ISOC1Q96CN7 298 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 HAVCR1Q96D42 359 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 MAELQ96JY0 434 aaKnown RBP3.3□□□□□ -1.88
SNHG1-220ENST00000544550 ZNF582Q96NG8 517 aaPredicted RBP3.3□□□□□ -1.88
SNHG1-220ENST00000544550 CCDC115Q96NT0 180 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 DDOQ99489 341 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms