RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	ZNF442	Q9H7R0	627 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	MOB1A	Q9H8S9	216 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	TRIM36	Q9NQ86	728 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	TUBG2	Q9NRH3	451 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	FAM206A	Q9NX38	181 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	SLC22A13	Q9Y226	551 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	USP9Y	O00507	2555 aa	Predicted RBP	8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	PKDREJ	Q9NTG1	2253 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	TRBV2	A0A0J9YWF9	115 aa		8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545		A0A1W2PPR1	153 aa		8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	TMEM129	A0AVI4	362 aa		8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	C5orf63	A6NC05	138 aa		8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545		E9PI62	339 aa		8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545		H3BSH0	61 aa		8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	XRCC2	O43543	280 aa		8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	TIMM8A	O60220	97 aa	Predicted RBP	8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	ICMT	O60725	284 aa		8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	MRPS14	O60783	128 aa	Known RBP	8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	CLPTM1	O96005	669 aa		8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	HSMCR30	P0CW71	290 aa		8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	CFL1	P23528	166 aa	Known RBP	8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	TTK	P33981	857 aa		8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	MPV17	P39210	176 aa		8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	GTF2A1	P52655	376 aa	Predicted RBP	8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	WNT4	P56705	351 aa		8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	KLF3	P57682	345 aa	Predicted RBP	8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	ZNF92	Q03936	586 aa		8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	ALKBH1	Q13686	389 aa	Known RBP	8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	GK2	Q14410	553 aa	Predicted RBP	8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	SPHAR	Q15513	63 aa		8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	ADIPOQ	Q15848	244 aa		8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	MOG	Q16653	247 aa		8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	NKPD1	Q17RQ9	610 aa		8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	KCTD21	Q4G0X4	260 aa		8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	WDR38	Q5JTN6	314 aa		8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	AGAP6	Q5VW22	663 aa		8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	OR2T2	Q6IF00	324 aa		8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	ZNF773	Q6PK81	442 aa		8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	LRP11	Q86VZ4	500 aa		8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	CATSPERD	Q86XM0	798 aa		8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	ELMOD2	Q8IZ81	293 aa		8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	MUC15	Q8N387	334 aa		8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	ZNF676	Q8N7Q3	588 aa		8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	OR2G2	Q8NGZ5	317 aa		8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	OR51E1	Q8TCB6	317 aa		8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	MRPL24	Q96A35	216 aa	Known RBP	8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	FAM71F1	Q96KD3	344 aa	Predicted RBP	8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	NR1H4	Q96RI1	486 aa	Predicted RBP	8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	MRPL37	Q9BZE1	423 aa	Known RBP	8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	RGCC	Q9H4X1	137 aa		8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	G6PC2	Q9NQR9	355 aa		8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	ZNF319	Q9P2F9	582 aa		8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	NUFIP1	Q9UHK0	495 aa	Known RBP	8.73	□□□□□ -1.01
CPSF7-221	ENST00000543545	TENM4	Q6N022	2769 aa		8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	HCFC1	P51610	2035 aa		8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545		A0A087WXM4	84 aa		8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	PNMA8C	A0A1B0GUJ8	204 aa		8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545		A0A1B0GVI7	797 aa		8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545		B9A039	149 aa		8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	P2RY10	O00398	339 aa		8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	SRSF10	O75494	262 aa	Known RBP	8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	BMP4	P12644	408 aa		8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	RAC2	P15153	192 aa		8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	SELE	P16581	610 aa		8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	ANOS1	P23352	680 aa		8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	PRSS12	P56730	875 aa		8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	TAS2R43	P59537	309 aa		8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	NANOS3	P60323	173 aa	Known RBP	8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	SNRPD2	P62316	118 aa	Known RBP	8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	SLC3A1	Q07837	685 aa		8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	IRF3	Q14653	427 aa		8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	ALKBH6	Q3KRA9	238 aa		8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	CCDC58	Q4VC31	144 aa		8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	MBNL2	Q5VZF2	373 aa	Known RBP	8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	RPL22L1	Q6P5R6	122 aa	Known RBP	8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	PRSS45	Q7RTY3	260 aa		8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	RDH10	Q8IZV5	341 aa		8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	SPART	Q8N0X7	666 aa		8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	OR5AS1	Q8N127	324 aa		8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	PRSS35	Q8N3Z0	413 aa		8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	ZNF611	Q8N823	705 aa		8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	ZFP41	Q8N8Y5	198 aa		8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	TSPAN14	Q8NG11	270 aa		8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	HAVCR1	Q96D42	359 aa		8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	OR5M11	Q96RB7	305 aa		8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	COMMD4	Q9H0A8	199 aa		8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	PLEKHF2	Q9H8W4	249 aa		8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	DYNLRB1	Q9NP97	96 aa		8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	GPR84	Q9NQS5	396 aa		8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	FRRS1L	Q9P0K9	344 aa		8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	TAAR3P	Q9P1P4	343 aa		8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	GPR160	Q9UJ42	338 aa		8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	PURG	Q9UJV8	347 aa	Known RBP	8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	EDAR	Q9UNE0	448 aa		8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	LAMP3	Q9UQV4	416 aa		8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	CAD	P27708	2225 aa		8.72	□□□□□ -1.01
CPSF7-221	ENST00000543545	GCN1	Q92616	2671 aa	Known RBP	8.71	□□□□□ -1.01
CPSF7-221	ENST00000543545	RTTN	Q86VV8	2226 aa		8.71	□□□□□ -1.02
CPSF7-221	ENST00000543545		A0A0U1RQV5	110 aa		8.71	□□□□□ -1.02
CPSF7-221	ENST00000543545	PLSCR5	A0PG75	271 aa		8.71	□□□□□ -1.02

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms