RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 SPSB4Q96A44 273 aa10.46□□□□□ -0.73
DDX55-210ENST00000543016 ZNF649Q9BS31 505 aa10.46□□□□□ -0.73
DDX55-210ENST00000543016 TRAF4Q9BUZ4 470 aaPredicted RBP10.46□□□□□ -0.73
DDX55-210ENST00000543016 REPIN1Q9BWE0 567 aaKnown RBP10.46□□□□□ -0.73
DDX55-210ENST00000543016 CDCA4Q9BXL8 241 aa10.46□□□□□ -0.73
DDX55-210ENST00000543016 MS4A5Q9H3V2 200 aa10.46□□□□□ -0.73
DDX55-210ENST00000543016 CXorf56Q9H5V9 222 aa10.46□□□□□ -0.73
DDX55-210ENST00000543016 FAM206AQ9NX38 181 aa10.46□□□□□ -0.73
DDX55-210ENST00000543016 GNG8Q9UK08 70 aa10.46□□□□□ -0.73
DDX55-210ENST00000543016 ERGIC3Q9Y282 383 aa10.46□□□□□ -0.73
DDX55-210ENST00000543016 AKAP6Q13023 2319 aa10.45□□□□□ -0.74
DDX55-210ENST00000543016 PTGES3LE9PB15 166 aa10.45□□□□□ -0.74
DDX55-210ENST00000543016 J3QLW9 94 aa10.45□□□□□ -0.74
DDX55-210ENST00000543016 PSMD9O00233 223 aa10.45□□□□□ -0.74
DDX55-210ENST00000543016 RGS10O43665 173 aa10.45□□□□□ -0.74
DDX55-210ENST00000543016 SRSF10O75494 262 aaKnown RBP10.45□□□□□ -0.74
DDX55-210ENST00000543016 ZNF19P17023 458 aa10.45□□□□□ -0.74
DDX55-210ENST00000543016 DNASE1P24855 282 aa10.45□□□□□ -0.74
DDX55-210ENST00000543016 TGM4P49221 684 aa10.45□□□□□ -0.74
DDX55-210ENST00000543016 CCR9P51686 369 aa10.45□□□□□ -0.74
DDX55-210ENST00000543016 GBX2P52951 348 aaPredicted RBP10.45□□□□□ -0.74
DDX55-210ENST00000543016 OR12D2P58182 307 aa10.45□□□□□ -0.74
DDX55-210ENST00000543016 GABARAPL2P60520 117 aa10.45□□□□□ -0.74
DDX55-210ENST00000543016 GK2Q14410 553 aaPredicted RBP10.45□□□□□ -0.74
DDX55-210ENST00000543016 TIGD6Q17RP2 521 aa10.45□□□□□ -0.74
DDX55-210ENST00000543016 CCDC58Q4VC31 144 aa10.45□□□□□ -0.74
DDX55-210ENST00000543016 TP53I3Q53FA7 332 aa10.45□□□□□ -0.74
DDX55-210ENST00000543016 BCL2L15Q5TBC7 163 aa10.45□□□□□ -0.74
DDX55-210ENST00000543016 PGAP1Q75T13 922 aa10.45□□□□□ -0.74
DDX55-210ENST00000543016 PRSS48Q7RTY5 328 aa10.45□□□□□ -0.74
DDX55-210ENST00000543016 MRPL21Q7Z2W9 205 aaKnown RBP10.45□□□□□ -0.74
DDX55-210ENST00000543016 NAA40Q86UY6 237 aa10.45□□□□□ -0.74
DDX55-210ENST00000543016 ELMOD2Q8IZ81 293 aa10.45□□□□□ -0.74
DDX55-210ENST00000543016 FTMTQ8N4E7 242 aa10.45□□□□□ -0.74
DDX55-210ENST00000543016 IGFBPL1Q8WX77 278 aa10.45□□□□□ -0.74
DDX55-210ENST00000543016 ZDHHC16Q969W1 377 aa10.45□□□□□ -0.74
DDX55-210ENST00000543016 SGK3Q96BR1 496 aa10.45□□□□□ -0.74
DDX55-210ENST00000543016 CMBLQ96DG6 245 aa10.45□□□□□ -0.74
DDX55-210ENST00000543016 C4orf36Q96KX1 117 aa10.45□□□□□ -0.74
DDX55-210ENST00000543016 LURAP1Q96LR2 239 aa10.45□□□□□ -0.74
DDX55-210ENST00000543016 SIGLEC11Q96RL6 698 aa10.45□□□□□ -0.74
DDX55-210ENST00000543016 CCL19Q99731 98 aa10.45□□□□□ -0.74
DDX55-210ENST00000543016 MRPL37Q9BZE1 423 aaKnown RBP10.45□□□□□ -0.74
DDX55-210ENST00000543016 PBOV1Q9GZY1 135 aa10.45□□□□□ -0.74
DDX55-210ENST00000543016 SLC22A4Q9H015 551 aa10.45□□□□□ -0.74
DDX55-210ENST00000543016 OR51B6Q9H340 312 aa10.45□□□□□ -0.74
DDX55-210ENST00000543016 UBAP1Q9NZ09 502 aa10.45□□□□□ -0.74
DDX55-210ENST00000543016 DUSP13Q9UII6 198 aa10.45□□□□□ -0.74
DDX55-210ENST00000543016 ST6GALNAC2Q9UJ37 374 aa10.45□□□□□ -0.74
DDX55-210ENST00000543016 OR52A1Q9UKL2 312 aa10.45□□□□□ -0.74
DDX55-210ENST00000543016 NOP16Q9Y3C1 178 aaKnown RBP10.45□□□□□ -0.74
DDX55-210ENST00000543016 A0A1W2PPW3 197 aa10.44□□□□□ -0.74
DDX55-210ENST00000543016 LOC390937A0A1W2PQ73 354 aa10.44□□□□□ -0.74
DDX55-210ENST00000543016 PLSCR5A0PG75 271 aa10.44□□□□□ -0.74
DDX55-210ENST00000543016 M0R233 179 aa10.44□□□□□ -0.74
DDX55-210ENST00000543016 MYL12BO14950 172 aa10.44□□□□□ -0.74
DDX55-210ENST00000543016 TBX1O43435 398 aa10.44□□□□□ -0.74
DDX55-210ENST00000543016 MTRF1O75570 445 aaKnown RBP10.44□□□□□ -0.74
DDX55-210ENST00000543016 ERCC1P07992 297 aaPredicted RBP10.44□□□□□ -0.74
DDX55-210ENST00000543016 SOD3P08294 240 aa10.44□□□□□ -0.74
DDX55-210ENST00000543016 HTR1AP08908 422 aa10.44□□□□□ -0.74
DDX55-210ENST00000543016 SLC2A1P11166 492 aa10.44□□□□□ -0.74
DDX55-210ENST00000543016 PAX1P15863 534 aa10.44□□□□□ -0.74
DDX55-210ENST00000543016 ZNF12P17014 697 aa10.44□□□□□ -0.74
DDX55-210ENST00000543016 C21orf33P30042 268 aaPredicted RBP10.44□□□□□ -0.74
DDX55-210ENST00000543016 PPOXP50336 477 aa10.44□□□□□ -0.74
DDX55-210ENST00000543016 ETV1P50549 477 aa10.44□□□□□ -0.74
DDX55-210ENST00000543016 TAS2R43P59537 309 aa10.44□□□□□ -0.74
DDX55-210ENST00000543016 PSG7Q13046 419 aa10.44□□□□□ -0.74
DDX55-210ENST00000543016 MST1LQ2TV78 715 aa10.44□□□□□ -0.74
DDX55-210ENST00000543016 SNAI3Q3KNW1 292 aa10.44□□□□□ -0.74
DDX55-210ENST00000543016 FAM209AQ5JX71 171 aa10.44□□□□□ -0.74
DDX55-210ENST00000543016 GLYATL3Q5SZD4 288 aa10.44□□□□□ -0.74
DDX55-210ENST00000543016 C11orf71Q6IPW1 123 aa10.44□□□□□ -0.74
DDX55-210ENST00000543016 CATSPERDQ86XM0 798 aa10.44□□□□□ -0.74
DDX55-210ENST00000543016 CSNK2A3Q8NEV1 391 aa10.44□□□□□ -0.74
DDX55-210ENST00000543016 OR8B12Q8NGG6 310 aa10.44□□□□□ -0.74
DDX55-210ENST00000543016 RORBQ92753 470 aa10.44□□□□□ -0.74
DDX55-210ENST00000543016 MBD6Q96DN6 1003 aa10.44□□□□□ -0.74
DDX55-210ENST00000543016 PELI1Q96FA3 418 aa10.44□□□□□ -0.74
DDX55-210ENST00000543016 REEP6Q96HR9 211 aa10.44□□□□□ -0.74
DDX55-210ENST00000543016 DIRC2Q96SL1 478 aa10.44□□□□□ -0.74
DDX55-210ENST00000543016 MND1Q9BWT6 205 aa10.44□□□□□ -0.74
DDX55-210ENST00000543016 G6PC2Q9NQR9 355 aa10.44□□□□□ -0.74
DDX55-210ENST00000543016 ACOXLQ9NUZ1 547 aa10.44□□□□□ -0.74
DDX55-210ENST00000543016 BEX4Q9NWD9 120 aaPredicted RBP10.44□□□□□ -0.74
DDX55-210ENST00000543016 BABAM2Q9NXR7 383 aa10.44□□□□□ -0.74
DDX55-210ENST00000543016 PTTG3PQ9NZH4 202 aa10.44□□□□□ -0.74
DDX55-210ENST00000543016 PURGQ9UJV8 347 aaKnown RBP10.44□□□□□ -0.74
DDX55-210ENST00000543016 LAMP3Q9UQV4 416 aa10.44□□□□□ -0.74
DDX55-210ENST00000543016 LRCH1Q9Y2L9 728 aa10.44□□□□□ -0.74
DDX55-210ENST00000543016 CENPEQ02224 2701 aa10.44□□□□□ -0.74
DDX55-210ENST00000543016 ABCA12Q86UK0 2595 aa10.44□□□□□ -0.74
DDX55-210ENST00000543016 CACNA1DQ01668 2161 aa10.43□□□□□ -0.74
DDX55-210ENST00000543016 RAI1Q7Z5J4 1906 aaPredicted RBP10.43□□□□□ -0.74
DDX55-210ENST00000543016 NAV2Q8IVL1 2488 aa10.43□□□□□ -0.74
DDX55-210ENST00000543016 GGT3PA6NGU5 568 aa10.43□□□□□ -0.74
DDX55-210ENST00000543016 DHRS7CA6NNS2 312 aa10.43□□□□□ -0.74
DDX55-210ENST00000543016 IQCF6A8MYZ5 107 aa10.43□□□□□ -0.74
DDX55-210ENST00000543016 H7C417 338 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms