RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 THEM6Q8WUY1 208 aa16.99■□□□□ 0.31
CACNA2D4-215ENST00000542340 ITLN1Q8WWA0 313 aa16.99■□□□□ 0.31
CACNA2D4-215ENST00000542340 RAB3IPQ96QF0 476 aaPredicted RBP16.99■□□□□ 0.31
CACNA2D4-215ENST00000542340 OR2V2Q96R30 315 aa16.99■□□□□ 0.31
CACNA2D4-215ENST00000542340 OPA3Q9H6K4 179 aa16.99■□□□□ 0.31
CACNA2D4-215ENST00000542340 NARFLQ9H6Q4 476 aa16.99■□□□□ 0.31
CACNA2D4-215ENST00000542340 KCNS2Q9ULS6 477 aa16.99■□□□□ 0.31
CACNA2D4-215ENST00000542340 WIPI2Q9Y4P8 454 aa16.99■□□□□ 0.31
CACNA2D4-215ENST00000542340 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.99■□□□□ 0.315e-8■■■■□ 20.8
CACNA2D4-215ENST00000542340 JMJD1CQ15652 2540 aa16.99■□□□□ 0.31
CACNA2D4-215ENST00000542340 C5orf63A6NC05 138 aa16.98■□□□□ 0.31
CACNA2D4-215ENST00000542340 CD300LBA8K4G0 201 aa16.98■□□□□ 0.31
CACNA2D4-215ENST00000542340 XRCC2O43543 280 aa16.98■□□□□ 0.31
CACNA2D4-215ENST00000542340 H2BFMP0C1H6 154 aa16.98■□□□□ 0.31
CACNA2D4-215ENST00000542340 ALOX5APP20292 161 aa16.98■□□□□ 0.31
CACNA2D4-215ENST00000542340 NAA10P41227 235 aaPredicted RBP16.98■□□□□ 0.31
CACNA2D4-215ENST00000542340 PRSS12P56730 875 aa16.98■□□□□ 0.31
CACNA2D4-215ENST00000542340 GLYATL3Q5SZD4 288 aa16.98■□□□□ 0.31
CACNA2D4-215ENST00000542340 LCN1P1Q5VSP4 162 aa16.98■□□□□ 0.31
CACNA2D4-215ENST00000542340 SLC16A9Q7RTY1 509 aa16.98■□□□□ 0.31
CACNA2D4-215ENST00000542340 PEG10Q86TG7 708 aaKnown RBP16.98■□□□□ 0.31
CACNA2D4-215ENST00000542340 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.98■□□□□ 0.31
CACNA2D4-215ENST00000542340 TCEANCQ8N8B7 351 aa16.98■□□□□ 0.31
CACNA2D4-215ENST00000542340 OR10AD1Q8NGE0 317 aa16.98■□□□□ 0.31
CACNA2D4-215ENST00000542340 OR2AE1Q8NHA4 323 aa16.98■□□□□ 0.31
CACNA2D4-215ENST00000542340 TMEM163Q8TC26 289 aa16.98■□□□□ 0.31
CACNA2D4-215ENST00000542340 SPRYD4Q8WW59 207 aaPredicted RBP16.98■□□□□ 0.31
CACNA2D4-215ENST00000542340 GABARAPL3Q9BY60 117 aa16.98■□□□□ 0.31
CACNA2D4-215ENST00000542340 YIPF3Q9GZM5 350 aa16.98■□□□□ 0.31
CACNA2D4-215ENST00000542340 TMEM106BQ9NUM4 274 aa16.98■□□□□ 0.31
CACNA2D4-215ENST00000542340 H2AFY2Q9P0M6 372 aaPredicted RBP16.98■□□□□ 0.31
CACNA2D4-215ENST00000542340 CDC42EP3Q9UKI2 254 aa16.98■□□□□ 0.31
CACNA2D4-215ENST00000542340 PPP1R3CQ9UQK1 317 aa16.98■□□□□ 0.31
CACNA2D4-215ENST00000542340 MALRD1Q5VYJ5 2156 aa16.98■□□□□ 0.31
CACNA2D4-215ENST00000542340 CCDC182A6NF36 153 aa16.97■□□□□ 0.31
CACNA2D4-215ENST00000542340 B4DSR2 109 aa16.97■□□□□ 0.31
CACNA2D4-215ENST00000542340 H0YL77 283 aa16.97■□□□□ 0.31
CACNA2D4-215ENST00000542340 MLNRO43193 412 aa16.97■□□□□ 0.31
CACNA2D4-215ENST00000542340 ANXA2P07355 339 aaKnown RBP16.97■□□□□ 0.31
CACNA2D4-215ENST00000542340 ANOS1P23352 680 aa16.97■□□□□ 0.31
CACNA2D4-215ENST00000542340 POLR2IP36954 125 aaKnown RBP16.97■□□□□ 0.31
CACNA2D4-215ENST00000542340 SRP9P49458 86 aaKnown RBP16.97■□□□□ 0.31
CACNA2D4-215ENST00000542340 AADACL4Q5VUY2 407 aa16.97■□□□□ 0.31
CACNA2D4-215ENST00000542340 NXNL2Q5VZ03 156 aa16.97■□□□□ 0.31
CACNA2D4-215ENST00000542340 PRSS45Q7RTY3 260 aa16.97■□□□□ 0.31
CACNA2D4-215ENST00000542340 OR52H1Q8NGJ2 320 aa16.97■□□□□ 0.31
CACNA2D4-215ENST00000542340 SPSB4Q96A44 273 aa16.97■□□□□ 0.31
CACNA2D4-215ENST00000542340 MEGF10Q96KG7 1140 aa16.97■□□□□ 0.31
CACNA2D4-215ENST00000542340 SLC22A4Q9H015 551 aa16.97■□□□□ 0.31
CACNA2D4-215ENST00000542340 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.97■□□□□ 0.31
CACNA2D4-215ENST00000542340 LAMP5Q9UJQ1 280 aa16.97■□□□□ 0.31
CACNA2D4-215ENST00000542340 N6AMT1Q9Y5N5 214 aa16.97■□□□□ 0.31
CACNA2D4-215ENST00000542340 ANK3Q12955 4377 aaKnown RBP16.96■□□□□ 0.31
CACNA2D4-215ENST00000542340 GGT3PA6NGU5 568 aa16.96■□□□□ 0.31
CACNA2D4-215ENST00000542340 IFNL4K9M1U5 179 aa16.96■□□□□ 0.31
CACNA2D4-215ENST00000542340 ZNF121P58317 390 aaPredicted RBP16.96■□□□□ 0.31
CACNA2D4-215ENST00000542340 CHRFAM7AQ494W8 412 aa16.96■□□□□ 0.31
CACNA2D4-215ENST00000542340 MEPCEQ7L2J0 689 aaKnown RBP16.96■□□□□ 0.31
CACNA2D4-215ENST00000542340 RIBC2Q9H4K1 309 aa16.96■□□□□ 0.31
CACNA2D4-215ENST00000542340 ZNF665Q9H7R5 613 aa16.96■□□□□ 0.31
CACNA2D4-215ENST00000542340 NIPAL2Q9H841 368 aa16.96■□□□□ 0.31
CACNA2D4-215ENST00000542340 GCM1Q9NP62 436 aa16.96■□□□□ 0.31
CACNA2D4-215ENST00000542340 KLHDC2Q9Y2U9 406 aa16.96■□□□□ 0.31
CACNA2D4-215ENST00000542340 NOP16Q9Y3C1 178 aaKnown RBP16.96■□□□□ 0.31
CACNA2D4-215ENST00000542340 NPTNQ9Y639 398 aa16.96■□□□□ 0.31
CACNA2D4-215ENST00000542340 ABCA2Q9BZC7 2435 aa16.96■□□□□ 0.3
CACNA2D4-215ENST00000542340 SLC22A31A6NKX4 558 aa16.95■□□□□ 0.3
CACNA2D4-215ENST00000542340 FAM157AC9JC47 383 aa16.95■□□□□ 0.3
CACNA2D4-215ENST00000542340 F5H5P2 479 aa16.95■□□□□ 0.3
CACNA2D4-215ENST00000542340 M0R129 80 aa16.95■□□□□ 0.3
CACNA2D4-215ENST00000542340 TBX1O43435 398 aa16.95■□□□□ 0.3
CACNA2D4-215ENST00000542340 HLA-DPB1P04440 258 aa16.95■□□□□ 0.3
CACNA2D4-215ENST00000542340 ALPLP05186 524 aa16.95■□□□□ 0.3
CACNA2D4-215ENST00000542340 DDOSTP39656 456 aa16.95■□□□□ 0.3
CACNA2D4-215ENST00000542340 KCTD18Q6PI47 426 aaPredicted RBP16.95■□□□□ 0.3
CACNA2D4-215ENST00000542340 DEGS2Q6QHC5 323 aa16.95■□□□□ 0.3
CACNA2D4-215ENST00000542340 BCDIN3DQ7Z5W3 292 aaKnown RBP16.95■□□□□ 0.3
CACNA2D4-215ENST00000542340 KRT77Q7Z794 578 aa16.95■□□□□ 0.3
CACNA2D4-215ENST00000542340 GID4Q8IVV7 300 aa16.95■□□□□ 0.3
CACNA2D4-215ENST00000542340 CELF2-AS1Q8N7Q2 184 aa16.95■□□□□ 0.3
CACNA2D4-215ENST00000542340 SGK3Q96BR1 496 aa16.95■□□□□ 0.3
CACNA2D4-215ENST00000542340 IL4I1Q96RQ9 567 aa16.95■□□□□ 0.3
CACNA2D4-215ENST00000542340 OR10A2Q9H208 303 aa16.95■□□□□ 0.3
CACNA2D4-215ENST00000542340 S100A14Q9HCY8 104 aa16.95■□□□□ 0.3
CACNA2D4-215ENST00000542340 DCAF16Q9NXF7 216 aa16.95■□□□□ 0.3
CACNA2D4-215ENST00000542340 USE1Q9NZ43 259 aa16.95■□□□□ 0.3
CACNA2D4-215ENST00000542340 DNAJC27Q9NZQ0 273 aa16.95■□□□□ 0.3
CACNA2D4-215ENST00000542340 MRPL15Q9P015 296 aaKnown RBP16.95■□□□□ 0.3
CACNA2D4-215ENST00000542340 LPAR3Q9UBY5 353 aa16.95■□□□□ 0.3
CACNA2D4-215ENST00000542340 TMEM14AQ9Y6G1 99 aa16.95■□□□□ 0.3
CACNA2D4-215ENST00000542340 TANC2Q9HCD6 1990 aa16.95■□□□□ 0.3
CACNA2D4-215ENST00000542340 GMDSO60547 372 aa16.94■□□□□ 0.3
CACNA2D4-215ENST00000542340 MRPL3P09001 348 aaKnown RBP16.94■□□□□ 0.3
CACNA2D4-215ENST00000542340 ANPEPP15144 967 aa16.94■□□□□ 0.3
CACNA2D4-215ENST00000542340 CFL1P23528 166 aaKnown RBP16.94■□□□□ 0.3
CACNA2D4-215ENST00000542340 HCCSP53701 268 aa16.94■□□□□ 0.3
CACNA2D4-215ENST00000542340 RAD23AP54725 363 aa16.94■□□□□ 0.3
CACNA2D4-215ENST00000542340 DVL1P1P54792 670 aaPredicted RBP16.94■□□□□ 0.3
CACNA2D4-215ENST00000542340 TIGD6Q17RP2 521 aa16.94■□□□□ 0.3
CACNA2D4-215ENST00000542340 LRRN1Q6UXK5 716 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms