RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 LRRN1Q6UXK5 716 aa8.23□□□□□ -1.09
YBX3-212ENST00000542002 SHFQ7M4L6 423 aa8.23□□□□□ -1.09
YBX3-212ENST00000542002 SLC16A9Q7RTY1 509 aa8.23□□□□□ -1.09
YBX3-212ENST00000542002 OR10AD1Q8NGE0 317 aa8.23□□□□□ -1.09
YBX3-212ENST00000542002 CLDND2Q8NHS1 167 aa8.23□□□□□ -1.09
YBX3-212ENST00000542002 ELMOD3Q96FG2 381 aa8.23□□□□□ -1.09
YBX3-212ENST00000542002 ZNF582Q96NG8 517 aaPredicted RBP8.23□□□□□ -1.09
YBX3-212ENST00000542002 MBOAT4Q96T53 435 aa8.23□□□□□ -1.09
YBX3-212ENST00000542002 RBM4BQ9BQ04 359 aaKnown RBP8.23□□□□□ -1.09
YBX3-212ENST00000542002 TEX12Q9BXU0 123 aa8.23□□□□□ -1.09
YBX3-212ENST00000542002 NARFLQ9H6Q4 476 aa8.23□□□□□ -1.09
YBX3-212ENST00000542002 SAP30LQ9HAJ7 183 aa8.23□□□□□ -1.09
YBX3-212ENST00000542002 YAE1D1Q9NRH1 226 aa8.23□□□□□ -1.09
YBX3-212ENST00000542002 USE1Q9NZ43 259 aa8.23□□□□□ -1.09
YBX3-212ENST00000542002 DNAJC27Q9NZQ0 273 aa8.23□□□□□ -1.09
YBX3-212ENST00000542002 FN1P02751 2386 aaKnown RBP8.23□□□□□ -1.09
YBX3-212ENST00000542002 CD300LBA8K4G0 201 aa8.22□□□□□ -1.09
YBX3-212ENST00000542002 FAM157AC9JC47 383 aa8.22□□□□□ -1.09
YBX3-212ENST00000542002 F5H5P2 479 aa8.22□□□□□ -1.09
YBX3-212ENST00000542002 LYNP07948 512 aa8.22□□□□□ -1.09
YBX3-212ENST00000542002 GPR6P46095 362 aaPredicted RBP8.22□□□□□ -1.09
YBX3-212ENST00000542002 ALDH3A2P51648 485 aa8.22□□□□□ -1.09
YBX3-212ENST00000542002 RIPPLY3P57055 190 aa8.22□□□□□ -1.09
YBX3-212ENST00000542002 GRB2P62993 217 aaKnown RBP8.22□□□□□ -1.09
YBX3-212ENST00000542002 HOXA4Q00056 320 aaPredicted RBP8.22□□□□□ -1.09
YBX3-212ENST00000542002 MVKQ03426 396 aa8.22□□□□□ -1.09
YBX3-212ENST00000542002 MALLQ13021 153 aa8.22□□□□□ -1.09
YBX3-212ENST00000542002 MAB21L1Q13394 359 aa8.22□□□□□ -1.09
YBX3-212ENST00000542002 FAM57BQ71RH2 274 aa8.22□□□□□ -1.09
YBX3-212ENST00000542002 PGAP1Q75T13 922 aa8.22□□□□□ -1.09
YBX3-212ENST00000542002 RHOUQ7L0Q8 258 aa8.22□□□□□ -1.09
YBX3-212ENST00000542002 PQLC1Q8N2U9 271 aa8.22□□□□□ -1.09
YBX3-212ENST00000542002 ZNF283Q8N7M2 679 aa8.22□□□□□ -1.09
YBX3-212ENST00000542002 ZNF454Q8N9F8 522 aa8.22□□□□□ -1.09
YBX3-212ENST00000542002 OR13G1Q8NGZ3 307 aa8.22□□□□□ -1.09
YBX3-212ENST00000542002 ITLN1Q8WWA0 313 aa8.22□□□□□ -1.09
YBX3-212ENST00000542002 PPP1R14AQ96A00 147 aa8.22□□□□□ -1.09
YBX3-212ENST00000542002 SPSB4Q96A44 273 aa8.22□□□□□ -1.09
YBX3-212ENST00000542002 C1orf159Q96HA4 380 aa8.22□□□□□ -1.09
YBX3-212ENST00000542002 RAB3IPQ96QF0 476 aaPredicted RBP8.22□□□□□ -1.09
YBX3-212ENST00000542002 OR2V2Q96R30 315 aa8.22□□□□□ -1.09
YBX3-212ENST00000542002 YIPF3Q9GZM5 350 aa8.22□□□□□ -1.09
YBX3-212ENST00000542002 ADGRL4Q9HBW9 690 aa8.22□□□□□ -1.09
YBX3-212ENST00000542002 GCM1Q9NP62 436 aa8.22□□□□□ -1.09
YBX3-212ENST00000542002 BRD7Q9NPI1 651 aa8.22□□□□□ -1.09
YBX3-212ENST00000542002 TMEM100Q9NV29 134 aa8.22□□□□□ -1.09
YBX3-212ENST00000542002 AASSQ9UDR5 926 aa8.22□□□□□ -1.09
YBX3-212ENST00000542002 CGGBP1Q9UFW8 167 aaPredicted RBP8.22□□□□□ -1.09
YBX3-212ENST00000542002 IL19Q9UHD0 177 aa8.22□□□□□ -1.09
YBX3-212ENST00000542002 WIPI2Q9Y4P8 454 aa8.22□□□□□ -1.09
YBX3-212ENST00000542002 LOC100289279A0A1B0GTE1 492 aa8.21□□□□□ -1.1
YBX3-212ENST00000542002 DLGAP1O14490 977 aa8.21□□□□□ -1.1
YBX3-212ENST00000542002 APOL3O95236 402 aa8.21□□□□□ -1.1
YBX3-212ENST00000542002 ANXA2P07355 339 aaKnown RBP8.21□□□□□ -1.1
YBX3-212ENST00000542002 H2BFMP0C1H6 154 aa8.21□□□□□ -1.1
YBX3-212ENST00000542002 ZNF16P17020 682 aaPredicted RBP8.21□□□□□ -1.1
YBX3-212ENST00000542002 CA6P23280 308 aa8.21□□□□□ -1.1
YBX3-212ENST00000542002 SLC15A1P46059 708 aa8.21□□□□□ -1.1
YBX3-212ENST00000542002 CHN2P52757 468 aa8.21□□□□□ -1.1
YBX3-212ENST00000542002 FAM3AP98173 230 aa8.21□□□□□ -1.1
YBX3-212ENST00000542002 HFEQ30201 348 aa8.21□□□□□ -1.1
YBX3-212ENST00000542002 NXNL2Q5VZ03 156 aa8.21□□□□□ -1.1
YBX3-212ENST00000542002 SSX6Q7RTT6 188 aa8.21□□□□□ -1.1
YBX3-212ENST00000542002 PRIMA1Q86XR5 153 aa8.21□□□□□ -1.1
YBX3-212ENST00000542002 ZNF420Q8TAQ5 688 aaPredicted RBP8.21□□□□□ -1.1
YBX3-212ENST00000542002 DVL3Q92997 716 aaPredicted RBP8.21□□□□□ -1.1
YBX3-212ENST00000542002 EME1Q96AY2 570 aa8.21□□□□□ -1.1
YBX3-212ENST00000542002 MEGF10Q96KG7 1140 aa8.21□□□□□ -1.1
YBX3-212ENST00000542002 HRASLS5Q96KN8 279 aa8.21□□□□□ -1.1
YBX3-212ENST00000542002 LYZL4Q96KX0 146 aa8.21□□□□□ -1.1
YBX3-212ENST00000542002 SIGLEC11Q96RL6 698 aa8.21□□□□□ -1.1
YBX3-212ENST00000542002 DIRC2Q96SL1 478 aa8.21□□□□□ -1.1
YBX3-212ENST00000542002 APOL4Q9BPW4 351 aa8.21□□□□□ -1.1
YBX3-212ENST00000542002 TTTY10Q9BZA0 68 aa8.21□□□□□ -1.1
YBX3-212ENST00000542002 EGLN1Q9GZT9 426 aa8.21□□□□□ -1.1
YBX3-212ENST00000542002 TOR3AQ9H497 397 aa8.21□□□□□ -1.1
YBX3-212ENST00000542002 TMEM106BQ9NUM4 274 aa8.21□□□□□ -1.1
YBX3-212ENST00000542002 HAO2Q9NYQ3 351 aa8.21□□□□□ -1.1
YBX3-212ENST00000542002 LAMP5Q9UJQ1 280 aa8.21□□□□□ -1.1
YBX3-212ENST00000542002 LRP12Q9Y561 859 aa8.21□□□□□ -1.1
YBX3-212ENST00000542002 A8MV72 311 aaPredicted RBP8.2□□□□□ -1.1
YBX3-212ENST00000542002 TBX1O43435 398 aa8.2□□□□□ -1.1
YBX3-212ENST00000542002 ENTPD6O75354 484 aa8.2□□□□□ -1.1
YBX3-212ENST00000542002 CRLF1O75462 422 aa8.2□□□□□ -1.1
YBX3-212ENST00000542002 SRSF10O75494 262 aaKnown RBP8.2□□□□□ -1.1
YBX3-212ENST00000542002 ZNF205O95201 554 aa8.2□□□□□ -1.1
YBX3-212ENST00000542002 BAG2O95816 211 aa8.2□□□□□ -1.1
YBX3-212ENST00000542002 PNPP00491 289 aa8.2□□□□□ -1.1
YBX3-212ENST00000542002 TGFAP01135 160 aa8.2□□□□□ -1.1
YBX3-212ENST00000542002 HSD11B1P28845 292 aa8.2□□□□□ -1.1
YBX3-212ENST00000542002 HTR1FP30939 366 aa8.2□□□□□ -1.1
YBX3-212ENST00000542002 GZMKP49863 264 aa8.2□□□□□ -1.1
YBX3-212ENST00000542002 ROM1Q03395 351 aa8.2□□□□□ -1.1
YBX3-212ENST00000542002 MPPED2Q15777 294 aa8.2□□□□□ -1.1
YBX3-212ENST00000542002 ZMAT1Q5H9K5 638 aa8.2□□□□□ -1.1
YBX3-212ENST00000542002 FAM201AQ5SY85 155 aa8.2□□□□□ -1.1
YBX3-212ENST00000542002 ZNF771Q7L3S4 317 aaPredicted RBP8.2□□□□□ -1.1
YBX3-212ENST00000542002 MRPL21Q7Z2W9 205 aaKnown RBP8.2□□□□□ -1.1
YBX3-212ENST00000542002 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.2□□□□□ -1.1
YBX3-212ENST00000542002 C10orf67Q8IYJ2 551 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms