RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 POU3F1Q03052 451 aaPredicted RBP8.45□□□□□ -1.06
CNOT4-212ENST00000541284 FGL1Q08830 312 aa8.45□□□□□ -1.06
CNOT4-212ENST00000541284 FAHD2BQ6P2I3 314 aaPredicted RBP8.45□□□□□ -1.06
CNOT4-212ENST00000541284 SHISA6Q6ZSJ9 500 aa8.45□□□□□ -1.06
CNOT4-212ENST00000541284 ACOT7LQ6ZUV0 252 aa8.45□□□□□ -1.06
CNOT4-212ENST00000541284 RHOUQ7L0Q8 258 aa8.45□□□□□ -1.06
CNOT4-212ENST00000541284 SLC29A4Q7RTT9 530 aa8.45□□□□□ -1.06
CNOT4-212ENST00000541284 CARFQ8N187 725 aa8.45□□□□□ -1.06
CNOT4-212ENST00000541284 TMEM104Q8NE00 496 aa8.45□□□□□ -1.06
CNOT4-212ENST00000541284 FAM46BQ96A09 425 aa8.45□□□□□ -1.06
CNOT4-212ENST00000541284 FOXRED1Q96CU9 486 aaPredicted RBP8.45□□□□□ -1.06
CNOT4-212ENST00000541284 FAHD2AQ96GK7 314 aa8.45□□□□□ -1.06
CNOT4-212ENST00000541284 PRRT1Q99946 306 aa8.45□□□□□ -1.06
CNOT4-212ENST00000541284 UQCC2Q9BRT2 126 aa8.45□□□□□ -1.06
CNOT4-212ENST00000541284 TMEM185BQ9H7F4 350 aa8.45□□□□□ -1.06
CNOT4-212ENST00000541284 C12orf4Q9NQ89 552 aa8.45□□□□□ -1.06
CNOT4-212ENST00000541284 STK17BO94768 372 aa8.45□□□□□ -1.06
CNOT4-212ENST00000541284 MYF5P13349 255 aa8.45□□□□□ -1.06
CNOT4-212ENST00000541284 BCKDHBP21953 392 aa8.45□□□□□ -1.06
CNOT4-212ENST00000541284 TMEM50BP56557 158 aa8.45□□□□□ -1.06
CNOT4-212ENST00000541284 NXPH1P58417 271 aa8.45□□□□□ -1.06
CNOT4-212ENST00000541284 INPP5JQ15735 1006 aaPredicted RBP8.45□□□□□ -1.06
CNOT4-212ENST00000541284 SLC38A9Q8NBW4 561 aa8.45□□□□□ -1.06
CNOT4-212ENST00000541284 STOML3Q8TAV4 291 aa8.45□□□□□ -1.06
CNOT4-212ENST00000541284 WDR77Q9BQA1 342 aaPredicted RBP8.45□□□□□ -1.06
CNOT4-212ENST00000541284 EMC6Q9BV81 110 aa8.45□□□□□ -1.06
CNOT4-212ENST00000541284 TMEM100Q9NV29 134 aa8.45□□□□□ -1.06
CNOT4-212ENST00000541284 SUSD2Q9UGT4 822 aa8.45□□□□□ -1.06
CNOT4-212ENST00000541284 NOP16Q9Y3C1 178 aaKnown RBP8.45□□□□□ -1.06
CNOT4-212ENST00000541284 IGLV3-12A0A075B6K2 115 aa8.45□□□□□ -1.06
CNOT4-212ENST00000541284 A0A1B0GX78 115 aa8.45□□□□□ -1.06
CNOT4-212ENST00000541284 DISC1C4P0D8 188 aa8.45□□□□□ -1.06
CNOT4-212ENST00000541284 EIF1AYO14602 144 aaKnown RBP8.45□□□□□ -1.06
CNOT4-212ENST00000541284 ZNF208O43345 1280 aa8.45□□□□□ -1.06
CNOT4-212ENST00000541284 ERCC1P07992 297 aaPredicted RBP8.45□□□□□ -1.06
CNOT4-212ENST00000541284 DLSTP36957 453 aa8.45□□□□□ -1.06
CNOT4-212ENST00000541284 DAP3P51398 398 aaKnown RBP8.45□□□□□ -1.06
CNOT4-212ENST00000541284 SUPT4H1P63272 117 aaKnown RBP8.45□□□□□ -1.06
CNOT4-212ENST00000541284 LRRC37A5PQ49AS3 106 aa8.45□□□□□ -1.06
CNOT4-212ENST00000541284 RNASE10Q5GAN6 216 aaKnown RBP8.45□□□□□ -1.06
CNOT4-212ENST00000541284 SLC25A53Q5H9E4 307 aa8.45□□□□□ -1.06
CNOT4-212ENST00000541284 HLA-DQA1Q5Y7H0 255 aa8.45□□□□□ -1.06
CNOT4-212ENST00000541284 RAB12Q6IQ22 244 aa8.45□□□□□ -1.06
CNOT4-212ENST00000541284 OR5AP2Q8NGF4 316 aa8.45□□□□□ -1.06
CNOT4-212ENST00000541284 ROBO4Q8WZ75 1007 aa8.45□□□□□ -1.06
CNOT4-212ENST00000541284 NKD1Q969G9 470 aa8.45□□□□□ -1.06
CNOT4-212ENST00000541284 SERINC1Q9NRX5 453 aa8.45□□□□□ -1.06
CNOT4-212ENST00000541284 MBD2Q9UBB5 411 aa8.45□□□□□ -1.06
CNOT4-212ENST00000541284 DKK1O94907 266 aa8.44□□□□□ -1.06
CNOT4-212ENST00000541284 DUS4LO95620 317 aaKnown RBP8.44□□□□□ -1.06
CNOT4-212ENST00000541284 CRHP06850 196 aa8.44□□□□□ -1.06
CNOT4-212ENST00000541284 H2BFMP0C1H6 154 aa8.44□□□□□ -1.06
CNOT4-212ENST00000541284 LYL1P12980 280 aa8.44□□□□□ -1.06
CNOT4-212ENST00000541284 KLK2P20151 261 aa8.44□□□□□ -1.06
CNOT4-212ENST00000541284 GSK3AP49840 483 aa8.44□□□□□ -1.06
CNOT4-212ENST00000541284 MICBQ29980 383 aa8.44□□□□□ -1.06
CNOT4-212ENST00000541284 SLC22A24Q8N4F4 322 aa8.44□□□□□ -1.06
CNOT4-212ENST00000541284 ESX1Q8N693 406 aa8.44□□□□□ -1.06
CNOT4-212ENST00000541284 DTWD2Q8NBA8 298 aa8.44□□□□□ -1.06
CNOT4-212ENST00000541284 OR1S2Q8NGQ3 325 aa8.44□□□□□ -1.06
CNOT4-212ENST00000541284 OR10R2Q8NGX6 335 aa8.44□□□□□ -1.06
CNOT4-212ENST00000541284 AIFM2Q9BRQ8 373 aa8.44□□□□□ -1.06
CNOT4-212ENST00000541284 TGIF2Q9GZN2 237 aa8.44□□□□□ -1.06
CNOT4-212ENST00000541284 COPS7AQ9UBW8 275 aa8.44□□□□□ -1.06
CNOT4-212ENST00000541284 PISDQ9UG56 409 aa8.44□□□□□ -1.06
CNOT4-212ENST00000541284 LOC100509620A0A075B734 347 aa8.44□□□□□ -1.06
CNOT4-212ENST00000541284 A0A1W2PP11 408 aa8.44□□□□□ -1.06
CNOT4-212ENST00000541284 NPIPA5E9PKD4 350 aa8.44□□□□□ -1.06
CNOT4-212ENST00000541284 MSTNO14793 375 aa8.44□□□□□ -1.06
CNOT4-212ENST00000541284 PGA4P0DJD7 388 aa8.44□□□□□ -1.06
CNOT4-212ENST00000541284 PGA3P0DJD8 388 aa8.44□□□□□ -1.06
CNOT4-212ENST00000541284 RPS2P15880 293 aaKnown RBP8.44□□□□□ -1.06
CNOT4-212ENST00000541284 ZNF823P16415 610 aa8.44□□□□□ -1.06
CNOT4-212ENST00000541284 CCL1P22362 96 aa8.44□□□□□ -1.06
CNOT4-212ENST00000541284 APOBEC1P41238 236 aaKnown RBP8.44□□□□□ -1.06
CNOT4-212ENST00000541284 TAF13Q15543 124 aa8.44□□□□□ -1.06
CNOT4-212ENST00000541284 MST1LQ2TV78 715 aa8.44□□□□□ -1.06
CNOT4-212ENST00000541284 PABPC1L2AQ5JQF8 200 aa8.44□□□□□ -1.06
CNOT4-212ENST00000541284 C10orf91Q5T1B1 145 aa8.44□□□□□ -1.06
CNOT4-212ENST00000541284 PEG10Q86TG7 708 aaKnown RBP8.44□□□□□ -1.06
CNOT4-212ENST00000541284 MISPQ8IVT2 679 aa8.44□□□□□ -1.06
CNOT4-212ENST00000541284 PIK3IP1Q96FE7 263 aa8.44□□□□□ -1.06
CNOT4-212ENST00000541284 LRRC46Q96FV0 321 aa8.44□□□□□ -1.06
CNOT4-212ENST00000541284 C5orf66Q9H5L9 145 aa8.44□□□□□ -1.06
CNOT4-212ENST00000541284 GAREM1Q9H706 876 aa8.44□□□□□ -1.06
CNOT4-212ENST00000541284 NPIPA1Q9UND3 350 aa8.44□□□□□ -1.06
CNOT4-212ENST00000541284 CEP290O15078 2479 aa8.44□□□□□ -1.06
CNOT4-212ENST00000541284 ARID1BQ8NFD5 2236 aaPredicted RBP8.44□□□□□ -1.06
CNOT4-212ENST00000541284 IGKV1-9A0A0C4DH69 117 aa8.43□□□□□ -1.06
CNOT4-212ENST00000541284 SOCS1O15524 211 aa8.43□□□□□ -1.06
CNOT4-212ENST00000541284 TRAF3IP2O43734 574 aaPredicted RBP8.43□□□□□ -1.06
CNOT4-212ENST00000541284 PIAS2O75928 621 aa8.43□□□□□ -1.06
CNOT4-212ENST00000541284 IGLV3-1P01715 115 aa8.43□□□□□ -1.06
CNOT4-212ENST00000541284 DCNP07585 359 aaKnown RBP8.43□□□□□ -1.06
CNOT4-212ENST00000541284 CD79AP11912 226 aa8.43□□□□□ -1.06
CNOT4-212ENST00000541284 BIDP55957 195 aa8.43□□□□□ -1.06
CNOT4-212ENST00000541284 SRSF3P84103 164 aaKnown RBP8.43□□□□□ -1.06
CNOT4-212ENST00000541284 IL15RAQ13261 267 aa8.43□□□□□ -1.06
CNOT4-212ENST00000541284 ATXN7L3Q14CW9 347 aaPredicted RBP8.43□□□□□ -1.06
CNOT4-212ENST00000541284 HIST3H3Q16695 136 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms