RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 FTMTQ8N4E7 242 aa16.06■□□□□ 0.16
VPS33A-205ENST00000541169 REPIN1Q9BWE0 567 aaKnown RBP16.06■□□□□ 0.16
VPS33A-205ENST00000541169 PTTG3PQ9NZH4 202 aa16.06■□□□□ 0.16
VPS33A-205ENST00000541169 FZR1Q9UM11 496 aa16.06■□□□□ 0.16
VPS33A-205ENST00000541169 COPS3Q9UNS2 423 aa16.06■□□□□ 0.16
VPS33A-205ENST00000541169 ARFGEF3Q5TH69 2177 aa16.06■□□□□ 0.16
VPS33A-205ENST00000541169 METTL15A6NJ78 407 aa16.05■□□□□ 0.16
VPS33A-205ENST00000541169 CYSRT1A8MQ03 144 aa16.05■□□□□ 0.16
VPS33A-205ENST00000541169 IQCF6A8MYZ5 107 aa16.05■□□□□ 0.16
VPS33A-205ENST00000541169 J3QRE1 110 aa16.05■□□□□ 0.16
VPS33A-205ENST00000541169 RPSAP08865 295 aaKnown RBP16.05■□□□□ 0.16
VPS33A-205ENST00000541169 TNFSF4P23510 183 aa16.05■□□□□ 0.16
VPS33A-205ENST00000541169 ZNF81P51508 661 aa16.05■□□□□ 0.16
VPS33A-205ENST00000541169 MMP15P51511 669 aa16.05■□□□□ 0.16
VPS33A-205ENST00000541169 AQP4P55087 323 aa16.05■□□□□ 0.16
VPS33A-205ENST00000541169 MRPL28Q13084 256 aaKnown RBP16.05■□□□□ 0.16
VPS33A-205ENST00000541169 TESK1Q15569 626 aa16.05■□□□□ 0.16
VPS33A-205ENST00000541169 TIGD6Q17RP2 521 aa16.05■□□□□ 0.16
VPS33A-205ENST00000541169 NAA40Q86UY6 237 aa16.05■□□□□ 0.16
VPS33A-205ENST00000541169 OR8G5Q8NG78 346 aa16.05■□□□□ 0.16
VPS33A-205ENST00000541169 OR13G1Q8NGZ3 307 aa16.05■□□□□ 0.16
VPS33A-205ENST00000541169 FBLIM1Q8WUP2 373 aa16.05■□□□□ 0.16
VPS33A-205ENST00000541169 APH1BQ8WW43 257 aa16.05■□□□□ 0.16
VPS33A-205ENST00000541169 PGAM5Q96HS1 289 aa16.05■□□□□ 0.16
VPS33A-205ENST00000541169 JAM3Q9BX67 310 aa16.05■□□□□ 0.16
VPS33A-205ENST00000541169 ITGB1BP2Q9UKP3 347 aa16.05■□□□□ 0.16
VPS33A-205ENST00000541169 A0A0U1RQV5 110 aa16.04■□□□□ 0.16
VPS33A-205ENST00000541169 TBX1O43435 398 aa16.04■□□□□ 0.16
VPS33A-205ENST00000541169 IGHV4-39P01824 125 aa16.04■□□□□ 0.16
VPS33A-205ENST00000541169 IGHA1P01876 353 aa16.04■□□□□ 0.16
VPS33A-205ENST00000541169 ATP6V1B1P15313 513 aa16.04■□□□□ 0.16
VPS33A-205ENST00000541169 DCKP27707 260 aa16.04■□□□□ 0.16
VPS33A-205ENST00000541169 ALDH3B1P43353 468 aa16.04■□□□□ 0.16
VPS33A-205ENST00000541169 CDK5R2Q13319 367 aa16.04■□□□□ 0.16
VPS33A-205ENST00000541169 IZUMO2Q6UXV1 221 aa16.04■□□□□ 0.16
VPS33A-205ENST00000541169 KLBQ86Z14 1044 aa16.04■□□□□ 0.16
VPS33A-205ENST00000541169 LGALS12Q96DT0 336 aa16.04■□□□□ 0.16
VPS33A-205ENST00000541169 EGLN1Q9GZT9 426 aa16.04■□□□□ 0.16
VPS33A-205ENST00000541169 PLCXD1Q9NUJ7 323 aa16.04■□□□□ 0.16
VPS33A-205ENST00000541169 CNOT2Q9NZN8 540 aaKnown RBP16.04■□□□□ 0.16
VPS33A-205ENST00000541169 MYEF2Q9P2K5 600 aaKnown RBP16.04■□□□□ 0.16
VPS33A-205ENST00000541169 NUFIP1Q9UHK0 495 aaKnown RBP16.04■□□□□ 0.16
VPS33A-205ENST00000541169 SNX5Q9Y5X3 404 aa16.04■□□□□ 0.16
VPS33A-205ENST00000541169 EFCAB10A6NFE3 127 aa16.03■□□□□ 0.16
VPS33A-205ENST00000541169 NDUFS8O00217 210 aa16.03■□□□□ 0.16
VPS33A-205ENST00000541169 CLIC3O95833 236 aa16.03■□□□□ 0.16
VPS33A-205ENST00000541169 GNAO1P09471 354 aa16.03■□□□□ 0.16
VPS33A-205ENST00000541169 GALEQ14376 348 aa16.03■□□□□ 0.16
VPS33A-205ENST00000541169 HLXQ14774 488 aaPredicted RBP16.03■□□□□ 0.16
VPS33A-205ENST00000541169 SNAI3Q3KNW1 292 aa16.03■□□□□ 0.16
VPS33A-205ENST00000541169 CDONQ4KMG0 1287 aa16.03■□□□□ 0.16
VPS33A-205ENST00000541169 Q5PR19 223 aa16.03■□□□□ 0.16
VPS33A-205ENST00000541169 GLYATL3Q5SZD4 288 aa16.03■□□□□ 0.16
VPS33A-205ENST00000541169 ZNF684Q5T5D7 378 aa16.03■□□□□ 0.16
VPS33A-205ENST00000541169 FAM57BQ71RH2 274 aa16.03■□□□□ 0.16
VPS33A-205ENST00000541169 SYS1Q8N2H4 156 aa16.03■□□□□ 0.16
VPS33A-205ENST00000541169 YIPF7Q8N8F6 280 aa16.03■□□□□ 0.16
VPS33A-205ENST00000541169 CSNK2A3Q8NEV1 391 aa16.03■□□□□ 0.16
VPS33A-205ENST00000541169 CNIH3Q8TBE1 160 aa16.03■□□□□ 0.16
VPS33A-205ENST00000541169 SPRYD4Q8WW59 207 aaPredicted RBP16.03■□□□□ 0.16
VPS33A-205ENST00000541169 SORCS2Q96PQ0 1159 aa16.03■□□□□ 0.16
VPS33A-205ENST00000541169 ANKRD60Q9BZ19 345 aa16.03■□□□□ 0.16
VPS33A-205ENST00000541169 Q9H521 79 aa16.03■□□□□ 0.16
VPS33A-205ENST00000541169 FGF20Q9NP95 211 aaPredicted RBP16.03■□□□□ 0.16
VPS33A-205ENST00000541169 DECR2Q9NUI1 292 aa16.03■□□□□ 0.16
VPS33A-205ENST00000541169 FAM206AQ9NX38 181 aa16.03■□□□□ 0.16
VPS33A-205ENST00000541169 MRPL15Q9P015 296 aaKnown RBP16.03■□□□□ 0.16
VPS33A-205ENST00000541169 MRM2Q9UI43 246 aaKnown RBP16.03■□□□□ 0.16
VPS33A-205ENST00000541169 RAB26Q9ULW5 256 aa16.03■□□□□ 0.16
VPS33A-205ENST00000541169 R4GMQ9 66 aa16.03■□□□□ 0.16
VPS33A-205ENST00000541169 ARID1AO14497 2285 aa16.03■□□□□ 0.16
VPS33A-205ENST00000541169 GGT3PA6NGU5 568 aa16.02■□□□□ 0.16
VPS33A-205ENST00000541169 LOC110117498-PIK3R3F6TDL0 507 aa16.02■□□□□ 0.16
VPS33A-205ENST00000541169 CD55P08174 381 aa16.02■□□□□ 0.16
VPS33A-205ENST00000541169 SLC2A1P11166 492 aa16.02■□□□□ 0.16
VPS33A-205ENST00000541169 NAT2P11245 290 aa16.02■□□□□ 0.16
VPS33A-205ENST00000541169 PIPP12273 146 aaPredicted RBP16.02■□□□□ 0.16
VPS33A-205ENST00000541169 ZNF92Q03936 586 aa16.02■□□□□ 0.16
VPS33A-205ENST00000541169 MZT1Q08AG7 82 aa16.02■□□□□ 0.16
VPS33A-205ENST00000541169 C6orf52Q5T4I8 152 aa16.02■□□□□ 0.16
VPS33A-205ENST00000541169 CLEC2AQ6UVW9 174 aa16.02■□□□□ 0.16
VPS33A-205ENST00000541169 ZNF540Q8NDQ6 660 aa16.02■□□□□ 0.16
VPS33A-205ENST00000541169 CCDC54Q8NEL0 328 aa16.02■□□□□ 0.16
VPS33A-205ENST00000541169 REEP6Q96HR9 211 aa16.02■□□□□ 0.16
VPS33A-205ENST00000541169 TBX5Q99593 518 aa16.02■□□□□ 0.16
VPS33A-205ENST00000541169 RHNO1Q9BSD3 238 aa16.02■□□□□ 0.16
VPS33A-205ENST00000541169 POFUT1Q9H488 388 aa16.02■□□□□ 0.16
VPS33A-205ENST00000541169 ABCB9Q9NP78 766 aa16.02■□□□□ 0.16
VPS33A-205ENST00000541169 TMEM100Q9NV29 134 aa16.02■□□□□ 0.16
VPS33A-205ENST00000541169 A0A1B0GWJ7 208 aa16.01■□□□□ 0.15
VPS33A-205ENST00000541169 LOC390937A0A1W2PQ73 354 aa16.01■□□□□ 0.15
VPS33A-205ENST00000541169 CD300LBA8K4G0 201 aa16.01■□□□□ 0.15
VPS33A-205ENST00000541169 GMDSO60547 372 aa16.01■□□□□ 0.15
VPS33A-205ENST00000541169 MTRF1O75570 445 aaKnown RBP16.01■□□□□ 0.15
VPS33A-205ENST00000541169 MYL12AP19105 171 aa16.01■□□□□ 0.15
VPS33A-205ENST00000541169 TNFRSF1AP19438 455 aa16.01■□□□□ 0.15
VPS33A-205ENST00000541169 ZNF85Q03923 595 aa16.01■□□□□ 0.15
VPS33A-205ENST00000541169 LIPNQ5VXI9 398 aa16.01■□□□□ 0.15
VPS33A-205ENST00000541169 OR2T2Q6IF00 324 aa16.01■□□□□ 0.15
VPS33A-205ENST00000541169 SPERTQ8NA61 448 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms