RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 COX5BP10606 129 aa12.11□□□□□ -0.47
LTBR-209ENST00000541102 ALOX5APP20292 161 aa12.11□□□□□ -0.47
LTBR-209ENST00000541102 ACHEP22303 614 aa12.11□□□□□ -0.47
LTBR-209ENST00000541102 ZNF81P51508 661 aa12.11□□□□□ -0.47
LTBR-209ENST00000541102 TMEM33P57088 247 aa12.11□□□□□ -0.47
LTBR-209ENST00000541102 IL5RAQ01344 420 aa12.11□□□□□ -0.47
LTBR-209ENST00000541102 PCGF3Q3KNV8 242 aa12.11□□□□□ -0.47
LTBR-209ENST00000541102 LCN1P1Q5VSP4 162 aa12.11□□□□□ -0.47
LTBR-209ENST00000541102 TTC23Q5W5X9 447 aa12.11□□□□□ -0.47
LTBR-209ENST00000541102 SSX6Q7RTT6 188 aa12.11□□□□□ -0.47
LTBR-209ENST00000541102 SLC35F2Q8IXU6 374 aa12.11□□□□□ -0.47
LTBR-209ENST00000541102 THEM6Q8WUY1 208 aa12.11□□□□□ -0.47
LTBR-209ENST00000541102 RNF133Q8WVZ7 376 aa12.11□□□□□ -0.47
LTBR-209ENST00000541102 CNN2Q99439 309 aaKnown RBP12.11□□□□□ -0.47
LTBR-209ENST00000541102 TBX5Q99593 518 aa12.11□□□□□ -0.47
LTBR-209ENST00000541102 COQ7Q99807 217 aa12.11□□□□□ -0.47
LTBR-209ENST00000541102 ATF6BQ99941 703 aa12.11□□□□□ -0.47
LTBR-209ENST00000541102 SHARPINQ9H0F6 387 aa12.11□□□□□ -0.47
LTBR-209ENST00000541102 HDHD2Q9H0R4 259 aa12.11□□□□□ -0.47
LTBR-209ENST00000541102 CENPMQ9NSP4 180 aa12.11□□□□□ -0.47
LTBR-209ENST00000541102 DDX28Q9NUL7 540 aaKnown RBP12.11□□□□□ -0.47
LTBR-209ENST00000541102 WARS2Q9UGM6 360 aaKnown RBP12.11□□□□□ -0.47
LTBR-209ENST00000541102 CDC42EP3Q9UKI2 254 aa12.11□□□□□ -0.47
LTBR-209ENST00000541102 F5H5K5 113 aa12.1□□□□□ -0.47
LTBR-209ENST00000541102 H0YAE9 185 aa12.1□□□□□ -0.47
LTBR-209ENST00000541102 SBK2P0C263 348 aa12.1□□□□□ -0.47
LTBR-209ENST00000541102 ACSM4P0C7M7 580 aa12.1□□□□□ -0.47
LTBR-209ENST00000541102 SLC2A1P11166 492 aa12.1□□□□□ -0.47
LTBR-209ENST00000541102 OPRL1P41146 370 aa12.1□□□□□ -0.47
LTBR-209ENST00000541102 PRSS12P56730 875 aa12.1□□□□□ -0.47
LTBR-209ENST00000541102 MRPS11P82912 194 aaKnown RBP12.1□□□□□ -0.47
LTBR-209ENST00000541102 ZNF91Q05481 1191 aa12.1□□□□□ -0.47
LTBR-209ENST00000541102 MBNL2Q5VZF2 373 aaKnown RBP12.1□□□□□ -0.47
LTBR-209ENST00000541102 LRRN1Q6UXK5 716 aa12.1□□□□□ -0.47
LTBR-209ENST00000541102 C1orf174Q8IYL3 243 aa12.1□□□□□ -0.47
LTBR-209ENST00000541102 HPS1Q92902 700 aa12.1□□□□□ -0.47
LTBR-209ENST00000541102 LGALS12Q96DT0 336 aa12.1□□□□□ -0.47
LTBR-209ENST00000541102 RNFT2Q96EX2 444 aa12.1□□□□□ -0.47
LTBR-209ENST00000541102 APOL4Q9BPW4 351 aa12.1□□□□□ -0.47
LTBR-209ENST00000541102 YIPF3Q9GZM5 350 aa12.1□□□□□ -0.47
LTBR-209ENST00000541102 VCXQ9H320 206 aa12.1□□□□□ -0.47
LTBR-209ENST00000541102 CLN6Q9NWW5 311 aa12.1□□□□□ -0.47
LTBR-209ENST00000541102 STARD10Q9Y365 291 aa12.1□□□□□ -0.47
LTBR-209ENST00000541102 PCDHGB5Q9Y5G0 923 aa12.1□□□□□ -0.47
LTBR-209ENST00000541102 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.1□□□□□ -0.476e-7■■■□□ 17.2
LTBR-209ENST00000541102 ATRQ13535 2644 aa12.09□□□□□ -0.47
LTBR-209ENST00000541102 A0A1W2PQL4 384 aaPredicted RBP12.09□□□□□ -0.47
LTBR-209ENST00000541102 ZSCAN5BA6NJL1 495 aa12.09□□□□□ -0.47
LTBR-209ENST00000541102 H0YJX3 145 aa12.09□□□□□ -0.47
LTBR-209ENST00000541102 J3QRE1 110 aa12.09□□□□□ -0.47
LTBR-209ENST00000541102 WNT9BO14905 357 aa12.09□□□□□ -0.47
LTBR-209ENST00000541102 TIMM8AO60220 97 aaPredicted RBP12.09□□□□□ -0.47
LTBR-209ENST00000541102 IFNA2P01563 188 aa12.09□□□□□ -0.47
LTBR-209ENST00000541102 OTX1P32242 354 aaPredicted RBP12.09□□□□□ -0.47
LTBR-209ENST00000541102 CRYBB2P43320 205 aa12.09□□□□□ -0.47
LTBR-209ENST00000541102 MTNR1AP48039 350 aa12.09□□□□□ -0.47
LTBR-209ENST00000541102 PRKXP51817 358 aa12.09□□□□□ -0.47
LTBR-209ENST00000541102 MVKQ03426 396 aa12.09□□□□□ -0.47
LTBR-209ENST00000541102 PSG7Q13046 419 aa12.09□□□□□ -0.47
LTBR-209ENST00000541102 AVPI1Q5T686 147 aa12.09□□□□□ -0.47
LTBR-209ENST00000541102 IL17RELQ6ZVW7 336 aa12.09□□□□□ -0.47
LTBR-209ENST00000541102 LINC01356Q8N9X3 169 aa12.09□□□□□ -0.47
LTBR-209ENST00000541102 FBLIM1Q8WUP2 373 aa12.09□□□□□ -0.47
LTBR-209ENST00000541102 MDFIQ99750 246 aa12.09□□□□□ -0.47
LTBR-209ENST00000541102 COPS4Q9BT78 406 aa12.09□□□□□ -0.47
LTBR-209ENST00000541102 MSL2Q9HCI7 577 aa12.09□□□□□ -0.47
LTBR-209ENST00000541102 TBCCD1Q9NVR7 557 aa12.09□□□□□ -0.47
LTBR-209ENST00000541102 TMEM160Q9NX00 188 aa12.09□□□□□ -0.47
LTBR-209ENST00000541102 NKIRAS2Q9NYR9 191 aa12.09□□□□□ -0.47
LTBR-209ENST00000541102 TREM2Q9NZC2 230 aa12.09□□□□□ -0.47
LTBR-209ENST00000541102 ATPIF1Q9UII2 106 aa12.09□□□□□ -0.47
LTBR-209ENST00000541102 LAMP5Q9UJQ1 280 aa12.09□□□□□ -0.47
LTBR-209ENST00000541102 IGHV1-69-2A0A0G2JMI3 117 aa12.08□□□□□ -0.48
LTBR-209ENST00000541102 ZNF878C9JN71 531 aa12.08□□□□□ -0.48
LTBR-209ENST00000541102 ICMTO60725 284 aa12.08□□□□□ -0.48
LTBR-209ENST00000541102 RP2O75695 350 aa12.08□□□□□ -0.48
LTBR-209ENST00000541102 IGHV1-46P01743 117 aa12.08□□□□□ -0.48
LTBR-209ENST00000541102 LYNP07948 512 aa12.08□□□□□ -0.48
LTBR-209ENST00000541102 FAM157CP0CG43 387 aa12.08□□□□□ -0.48
LTBR-209ENST00000541102 DBTP11182 482 aaKnown RBP12.08□□□□□ -0.48
LTBR-209ENST00000541102 VHLP40337 213 aa12.08□□□□□ -0.48
LTBR-209ENST00000541102 MMP15P51511 669 aa12.08□□□□□ -0.48
LTBR-209ENST00000541102 CXCR4P61073 352 aa12.08□□□□□ -0.48
LTBR-209ENST00000541102 ZNF85Q03923 595 aa12.08□□□□□ -0.48
LTBR-209ENST00000541102 CDK5R2Q13319 367 aa12.08□□□□□ -0.48
LTBR-209ENST00000541102 HLXQ14774 488 aaPredicted RBP12.08□□□□□ -0.48
LTBR-209ENST00000541102 SNAI3Q3KNW1 292 aa12.08□□□□□ -0.48
LTBR-209ENST00000541102 FAM120AOSQ5T036 256 aa12.08□□□□□ -0.48
LTBR-209ENST00000541102 MEDAGQ5VYS4 303 aa12.08□□□□□ -0.48
LTBR-209ENST00000541102 COLCA1Q6ZS62 124 aa12.08□□□□□ -0.48
LTBR-209ENST00000541102 ZNF454Q8N9F8 522 aa12.08□□□□□ -0.48
LTBR-209ENST00000541102 CLDND2Q8NHS1 167 aa12.08□□□□□ -0.48
LTBR-209ENST00000541102 RFKQ969G6 155 aa12.08□□□□□ -0.48
LTBR-209ENST00000541102 CMBLQ96DG6 245 aa12.08□□□□□ -0.48
LTBR-209ENST00000541102 SAP30LQ9HAJ7 183 aa12.08□□□□□ -0.48
LTBR-209ENST00000541102 CYSLTR2Q9NS75 346 aa12.08□□□□□ -0.48
LTBR-209ENST00000541102 ZNF319Q9P2F9 582 aa12.08□□□□□ -0.48
LTBR-209ENST00000541102 LPAR3Q9UBY5 353 aa12.08□□□□□ -0.48
LTBR-209ENST00000541102 MYRFQ9Y2G1 1151 aa12.08□□□□□ -0.48
LTBR-209ENST00000541102 CACNG2Q9Y698 323 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms