RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 AADACL4Q5VUY2 407 aa11.09□□□□□ -0.63
LTBR-208ENST00000541005 NXNL2Q5VZ03 156 aa11.09□□□□□ -0.63
LTBR-208ENST00000541005 PGAP1Q75T13 922 aa11.09□□□□□ -0.63
LTBR-208ENST00000541005 SLC16A9Q7RTY1 509 aa11.09□□□□□ -0.63
LTBR-208ENST00000541005 MRPL21Q7Z2W9 205 aaKnown RBP11.09□□□□□ -0.63
LTBR-208ENST00000541005 OR5AS1Q8N127 324 aa11.09□□□□□ -0.63
LTBR-208ENST00000541005 OR52H1Q8NGJ2 320 aa11.09□□□□□ -0.63
LTBR-208ENST00000541005 CLDND2Q8NHS1 167 aa11.09□□□□□ -0.63
LTBR-208ENST00000541005 TMEM163Q8TC26 289 aa11.09□□□□□ -0.63
LTBR-208ENST00000541005 TIMD4Q96H15 378 aa11.09□□□□□ -0.63
LTBR-208ENST00000541005 TEAD3Q99594 435 aa11.09□□□□□ -0.63
LTBR-208ENST00000541005 YIPF3Q9GZM5 350 aa11.09□□□□□ -0.63
LTBR-208ENST00000541005 SP140LQ9H930 580 aa11.09□□□□□ -0.63
LTBR-208ENST00000541005 KLHDC2Q9Y2U9 406 aa11.09□□□□□ -0.63
LTBR-208ENST00000541005 C5orf63A6NC05 138 aa11.08□□□□□ -0.64
LTBR-208ENST00000541005 CD300LBA8K4G0 201 aa11.08□□□□□ -0.64
LTBR-208ENST00000541005 E9PQ18 207 aa11.08□□□□□ -0.64
LTBR-208ENST00000541005 IFNL4K9M1U5 179 aa11.08□□□□□ -0.64
LTBR-208ENST00000541005 WNT9BO14905 357 aa11.08□□□□□ -0.64
LTBR-208ENST00000541005 HSD11B1P28845 292 aa11.08□□□□□ -0.64
LTBR-208ENST00000541005 NAA10P41227 235 aaPredicted RBP11.08□□□□□ -0.64
LTBR-208ENST00000541005 ZNF121P58317 390 aaPredicted RBP11.08□□□□□ -0.64
LTBR-208ENST00000541005 FAM166AQ6J272 317 aa11.08□□□□□ -0.64
LTBR-208ENST00000541005 SPATC1Q76KD6 591 aa11.08□□□□□ -0.64
LTBR-208ENST00000541005 GID4Q8IVV7 300 aa11.08□□□□□ -0.64
LTBR-208ENST00000541005 CELF2-AS1Q8N7Q2 184 aa11.08□□□□□ -0.64
LTBR-208ENST00000541005 TCEANCQ8N8B7 351 aa11.08□□□□□ -0.64
LTBR-208ENST00000541005 LINC01356Q8N9X3 169 aa11.08□□□□□ -0.64
LTBR-208ENST00000541005 OR10AD1Q8NGE0 317 aa11.08□□□□□ -0.64
LTBR-208ENST00000541005 OR2AE1Q8NHA4 323 aa11.08□□□□□ -0.64
LTBR-208ENST00000541005 ITLN1Q8WWA0 313 aa11.08□□□□□ -0.64
LTBR-208ENST00000541005 MEGF10Q96KG7 1140 aa11.08□□□□□ -0.64
LTBR-208ENST00000541005 OR2V2Q96R30 315 aa11.08□□□□□ -0.64
LTBR-208ENST00000541005 SLC22A4Q9H015 551 aa11.08□□□□□ -0.64
LTBR-208ENST00000541005 NIPAL2Q9H841 368 aa11.08□□□□□ -0.64
LTBR-208ENST00000541005 TMEM106BQ9NUM4 274 aa11.08□□□□□ -0.64
LTBR-208ENST00000541005 TMEM100Q9NV29 134 aa11.08□□□□□ -0.64
LTBR-208ENST00000541005 HAO2Q9NYQ3 351 aa11.08□□□□□ -0.64
LTBR-208ENST00000541005 MRPL15Q9P015 296 aaKnown RBP11.08□□□□□ -0.64
LTBR-208ENST00000541005 WIPI2Q9Y4P8 454 aa11.08□□□□□ -0.64
LTBR-208ENST00000541005 ATRQ13535 2644 aa11.07□□□□□ -0.64
LTBR-208ENST00000541005 ANK3Q12955 4377 aaKnown RBP11.07□□□□□ -0.64
LTBR-208ENST00000541005 LOC100289279A0A1B0GTE1 492 aa11.07□□□□□ -0.64
LTBR-208ENST00000541005 SLC22A31A6NKX4 558 aa11.07□□□□□ -0.64
LTBR-208ENST00000541005 M0R129 80 aa11.07□□□□□ -0.64
LTBR-208ENST00000541005 LMX1BO60663 402 aa11.07□□□□□ -0.64
LTBR-208ENST00000541005 PTBP3O95758 552 aaKnown RBP11.07□□□□□ -0.64
LTBR-208ENST00000541005 H2BFMP0C1H6 154 aa11.07□□□□□ -0.64
LTBR-208ENST00000541005 SLC2A1P11166 492 aa11.07□□□□□ -0.64
LTBR-208ENST00000541005 GATA4P43694 442 aa11.07□□□□□ -0.64
LTBR-208ENST00000541005 SRP9P49458 86 aaKnown RBP11.07□□□□□ -0.64
LTBR-208ENST00000541005 MMP16P51512 607 aa11.07□□□□□ -0.64
LTBR-208ENST00000541005 PRSS12P56730 875 aa11.07□□□□□ -0.64
LTBR-208ENST00000541005 PSMA6P60900 246 aaKnown RBP11.07□□□□□ -0.64
LTBR-208ENST00000541005 LMO4P61968 165 aa11.07□□□□□ -0.64
LTBR-208ENST00000541005 ROM1Q03395 351 aa11.07□□□□□ -0.64
LTBR-208ENST00000541005 ZNF181Q2M3W8 571 aa11.07□□□□□ -0.64
LTBR-208ENST00000541005 DEGS2Q6QHC5 323 aa11.07□□□□□ -0.64
LTBR-208ENST00000541005 MEPCEQ7L2J0 689 aaKnown RBP11.07□□□□□ -0.64
LTBR-208ENST00000541005 BHLHE23Q8NDY6 225 aa11.07□□□□□ -0.64
LTBR-208ENST00000541005 CCL17Q92583 94 aa11.07□□□□□ -0.64
LTBR-208ENST00000541005 RAB1CQ92928 201 aa11.07□□□□□ -0.64
LTBR-208ENST00000541005 SIGLEC11Q96RL6 698 aa11.07□□□□□ -0.64
LTBR-208ENST00000541005 CNN2Q99439 309 aaKnown RBP11.07□□□□□ -0.64
LTBR-208ENST00000541005 MNTQ99583 582 aa11.07□□□□□ -0.64
LTBR-208ENST00000541005 RGCCQ9H4X1 137 aa11.07□□□□□ -0.64
LTBR-208ENST00000541005 S100A14Q9HCY8 104 aa11.07□□□□□ -0.64
LTBR-208ENST00000541005 GCM1Q9NP62 436 aa11.07□□□□□ -0.64
LTBR-208ENST00000541005 LAMP5Q9UJQ1 280 aa11.07□□□□□ -0.64
LTBR-208ENST00000541005 CDC42EP3Q9UKI2 254 aa11.07□□□□□ -0.64
LTBR-208ENST00000541005 KCNS2Q9ULS6 477 aa11.07□□□□□ -0.64
LTBR-208ENST00000541005 NOP16Q9Y3C1 178 aaKnown RBP11.07□□□□□ -0.64
LTBR-208ENST00000541005 TMEM14AQ9Y6G1 99 aa11.07□□□□□ -0.64
LTBR-208ENST00000541005 hCG_38984A0A1B0GV85 526 aa11.06□□□□□ -0.64
LTBR-208ENST00000541005 B4DSR2 109 aa11.06□□□□□ -0.64
LTBR-208ENST00000541005 H0YL77 283 aa11.06□□□□□ -0.64
LTBR-208ENST00000541005 EI24O14681 340 aa11.06□□□□□ -0.64
LTBR-208ENST00000541005 IGHV2-70P01814 119 aa11.06□□□□□ -0.64
LTBR-208ENST00000541005 ANXA2P07355 339 aaKnown RBP11.06□□□□□ -0.64
LTBR-208ENST00000541005 CFL1P23528 166 aaKnown RBP11.06□□□□□ -0.64
LTBR-208ENST00000541005 POLR2IP36954 125 aaKnown RBP11.06□□□□□ -0.64
LTBR-208ENST00000541005 DDOSTP39656 456 aa11.06□□□□□ -0.64
LTBR-208ENST00000541005 CD200P41217 278 aa11.06□□□□□ -0.64
LTBR-208ENST00000541005 ALDH3A2P51648 485 aa11.06□□□□□ -0.64
LTBR-208ENST00000541005 RAD23AP54725 363 aa11.06□□□□□ -0.64
LTBR-208ENST00000541005 AVPI1Q5T686 147 aa11.06□□□□□ -0.64
LTBR-208ENST00000541005 PEG10Q86TG7 708 aaKnown RBP11.06□□□□□ -0.64
LTBR-208ENST00000541005 KLBQ86Z14 1044 aa11.06□□□□□ -0.64
LTBR-208ENST00000541005 PQLC1Q8N2U9 271 aa11.06□□□□□ -0.64
LTBR-208ENST00000541005 OR56B2PQ8NGI1 322 aa11.06□□□□□ -0.64
LTBR-208ENST00000541005 OR8J1Q8NGP2 316 aa11.06□□□□□ -0.64
LTBR-208ENST00000541005 THEM6Q8WUY1 208 aa11.06□□□□□ -0.64
LTBR-208ENST00000541005 SPRYD4Q8WW59 207 aaPredicted RBP11.06□□□□□ -0.64
LTBR-208ENST00000541005 ASB17Q8WXJ9 295 aa11.06□□□□□ -0.64
LTBR-208ENST00000541005 RAB39BQ96DA2 213 aa11.06□□□□□ -0.64
LTBR-208ENST00000541005 HRASLS5Q96KN8 279 aa11.06□□□□□ -0.64
LTBR-208ENST00000541005 OR10A2Q9H208 303 aa11.06□□□□□ -0.64
LTBR-208ENST00000541005 RIBC2Q9H4K1 309 aa11.06□□□□□ -0.64
LTBR-208ENST00000541005 NARFLQ9H6Q4 476 aa11.06□□□□□ -0.64
LTBR-208ENST00000541005 ADGRL4Q9HBW9 690 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms