RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	ITGA5	P08648	1049 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	VAMP1	P23763	118 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	RFC3	P40938	356 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	MNDA	P41218	407 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	PTGFR	P43088	359 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	CAPZA2	P47755	286 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	CENPA	P49450	140 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	MECP2	P51608	486 aa	Known RBP	5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	PNLIPRP2	P54317	469 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	RNF4	P78317	190 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	ALKBH1	Q13686	389 aa	Known RBP	5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	ZNF766	Q5HY98	468 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	ATPAF1	Q5TC12	328 aa	Predicted RBP	5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	TMEM211	Q6ICI0	200 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	C11orf87	Q6NUJ2	197 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	DPY19L4	Q7Z388	723 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	FAM220A	Q7Z4H9	259 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	TMEM200A	Q86VY9	491 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	SPAG16	Q8N0X2	631 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	KCNRG	Q8N5I3	272 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	OR6N2	Q8NGY6	317 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	SELENOI	Q9C0D9	397 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	HRH4	Q9H3N8	390 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	PIGM	Q9H3S5	423 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	MBD2	Q9UBB5	411 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	SHPK	Q9UHJ6	478 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	MCTS1	Q9ULC4	181 aa	Known RBP	5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	TNFSF18	Q9UNG2	199 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	SLC22A13	Q9Y226	551 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	KIAA1549L	Q6ZVL6	1849 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	RALGAPA1	Q6GYQ0	2036 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	PLXNA2	O75051	1894 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	IGLV3-12	A0A075B6K2	115 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	CDRT15L2	A8MXV6	281 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	TM4SF5	O14894	197 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	NKX2-8	O15522	239 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	BCL2L11	O43521	198 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	THBS1	P07996	1170 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	RPS18	P62269	152 aa	Known RBP	5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	BTG2	P78543	158 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	SLC10A1	Q14973	349 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	TGIF1	Q15583	401 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	ANKRD16	Q6P6B7	361 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	KLHL24	Q6TFL4	600 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	DGAT2L6	Q6ZPD8	337 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	SLC35D2	Q76EJ3	337 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	OR1M1	Q8NGA1	313 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	GLYATL2	Q8WU03	294 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	ZBTB8A	Q96BR9	441 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	SPACA9	Q96E40	222 aa	Predicted RBP	5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	AMELY	Q99218	206 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	WDR76	Q9H967	626 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	OR2S2	Q9NQN1	319 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	CGGBP1	Q9UFW8	167 aa	Predicted RBP	5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	KCNK7	Q9Y2U2	307 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783		A0A087WZY1	265 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	MEX3A	A1L020	520 aa	Known RBP	5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	UPK3A	O75631	287 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	WNT11	O96014	354 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	PGAM2	P15259	253 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	AKR1C4	P17516	323 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	ACAA2	P42765	397 aa	Known RBP	5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	OR1C1	Q15619	314 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	SLC22A6	Q4U2R8	563 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	KLHL26	Q53HC5	615 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	LINC01590	Q5TEZ4	76 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	C5orf46	Q6UWT4	87 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	TMPPE	Q6ZT21	453 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	TMPRSS9	Q7Z410	1059 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	CCDC36	Q8IYA8	594 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	BPIFB2	Q8N4F0	458 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	FAM3D	Q96BQ1	224 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	ADO	Q96SZ5	270 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	MFRP	Q9BY79	579 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	NIT2	Q9NQR4	276 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	PRR13	Q9NZ81	148 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	OTOGL	Q3ZCN5	2332 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	IGHV3-20	A0A0C4DH32	117 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	C5orf51	A6NDU8	294 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	PMS2P2	O95744	297 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	IGKV1D-16	P01601	117 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	FABP1	P07148	127 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	AGTR1	P30556	359 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	SUMO3	P55854	103 aa	Predicted RBP	5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	CLN3	Q13286	438 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	EIF2B1	Q14232	305 aa	Known RBP	5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	AVPI1	Q5T686	147 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	POMZP3	Q6PJE2	187 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	ELP5	Q8TE02	316 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	ROBO4	Q8WZ75	1007 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	MRPL48	Q96GC5	212 aa	Known RBP	5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	SLC6A7	Q99884	636 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	WWTR1	Q9GZV5	400 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	GVINP1	Q7Z2Y8	2422 aa		5.05	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	SZT2	Q5T011	3432 aa		5.05	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	TMEM235	A6NFC5	223 aa		5.05	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	HRK	O00198	91 aa		5.05	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	SULT2B1	O00204	365 aa		5.05	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	ICOSLG	O75144	302 aa		5.05	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	SNAPC5	O75971	98 aa		5.05	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms