RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 IGHV2-70P01814 119 aa13.21□□□□□ -0.29
CIT-210ENST00000539413 SBK2P0C263 348 aa13.21□□□□□ -0.29
CIT-210ENST00000539413 SLC15A1P46059 708 aa13.21□□□□□ -0.29
CIT-210ENST00000539413 CX3CR1P49238 355 aa13.21□□□□□ -0.29
CIT-210ENST00000539413 MMP16P51512 607 aa13.21□□□□□ -0.29
CIT-210ENST00000539413 GRB2P62993 217 aaKnown RBP13.21□□□□□ -0.29
CIT-210ENST00000539413 PTGES3Q15185 160 aaKnown RBP13.21□□□□□ -0.29
CIT-210ENST00000539413 ASRGL1Q7L266 308 aa13.21□□□□□ -0.29
CIT-210ENST00000539413 CXXC5Q7LFL8 322 aaKnown RBP13.21□□□□□ -0.29
CIT-210ENST00000539413 SHFQ7M4L6 423 aa13.21□□□□□ -0.29
CIT-210ENST00000539413 PARP8Q8N3A8 854 aa13.21□□□□□ -0.29
CIT-210ENST00000539413 OR51F2Q8NH61 342 aa13.21□□□□□ -0.29
CIT-210ENST00000539413 ZNF420Q8TAQ5 688 aaPredicted RBP13.21□□□□□ -0.29
CIT-210ENST00000539413 RNF133Q8WVZ7 376 aa13.21□□□□□ -0.29
CIT-210ENST00000539413 SPRYD4Q8WW59 207 aaPredicted RBP13.21□□□□□ -0.29
CIT-210ENST00000539413 LRTOMTQ8WZ04 291 aa13.21□□□□□ -0.29
CIT-210ENST00000539413 HIF1ANQ9NWT6 349 aa13.21□□□□□ -0.29
CIT-210ENST00000539413 UBAP1Q9NZ09 502 aa13.21□□□□□ -0.29
CIT-210ENST00000539413 CD300LBA8K4G0 201 aa13.2□□□□□ -0.3
CIT-210ENST00000539413 CIB2O75838 187 aa13.2□□□□□ -0.3
CIT-210ENST00000539413 SLC2A5P22732 501 aa13.2□□□□□ -0.3
CIT-210ENST00000539413 HSD11B1P28845 292 aa13.2□□□□□ -0.3
CIT-210ENST00000539413 NAA10P41227 235 aaPredicted RBP13.2□□□□□ -0.3
CIT-210ENST00000539413 SRP9P49458 86 aaKnown RBP13.2□□□□□ -0.3
CIT-210ENST00000539413 SNAPC1Q16533 368 aa13.2□□□□□ -0.3
CIT-210ENST00000539413 SLC35D3Q5M8T2 416 aa13.2□□□□□ -0.3
CIT-210ENST00000539413 REPIN1Q9BWE0 567 aaKnown RBP13.2□□□□□ -0.3
CIT-210ENST00000539413 TEX12Q9BXU0 123 aa13.2□□□□□ -0.3
CIT-210ENST00000539413 TOR3AQ9H497 397 aa13.2□□□□□ -0.3
CIT-210ENST00000539413 KRT84Q9NSB2 600 aa13.2□□□□□ -0.3
CIT-210ENST00000539413 SONP18583 2426 aaKnown RBP13.2□□□□□ -0.3
CIT-210ENST00000539413 MALRD1Q5VYJ5 2156 aa13.2□□□□□ -0.3
CIT-210ENST00000539413 TRAV20A0A0B4J274 112 aa13.19□□□□□ -0.3
CIT-210ENST00000539413 GGT3PA6NGU5 568 aa13.19□□□□□ -0.3
CIT-210ENST00000539413 TMEM178BH3BS89 294 aa13.19□□□□□ -0.3
CIT-210ENST00000539413 TBX1O43435 398 aa13.19□□□□□ -0.3
CIT-210ENST00000539413 PLPP2O43688 288 aa13.19□□□□□ -0.3
CIT-210ENST00000539413 ANXA2P07355 339 aaKnown RBP13.19□□□□□ -0.3
CIT-210ENST00000539413 FCGR1AP12314 374 aa13.19□□□□□ -0.3
CIT-210ENST00000539413 ANPEPP15144 967 aa13.19□□□□□ -0.3
CIT-210ENST00000539413 PCMT1P22061 227 aa13.19□□□□□ -0.3
CIT-210ENST00000539413 CA6P23280 308 aa13.19□□□□□ -0.3
CIT-210ENST00000539413 EPHA2P29317 976 aa13.19□□□□□ -0.3
CIT-210ENST00000539413 OPRL1P41146 370 aa13.19□□□□□ -0.3
CIT-210ENST00000539413 RPS7P62081 194 aaKnown RBP13.19□□□□□ -0.3
CIT-210ENST00000539413 BTG1P62324 171 aa13.19□□□□□ -0.3
CIT-210ENST00000539413 ESRRGP62508 458 aa13.19□□□□□ -0.3
CIT-210ENST00000539413 MAB21L1Q13394 359 aa13.19□□□□□ -0.3
CIT-210ENST00000539413 APOFQ13790 326 aa13.19□□□□□ -0.3
CIT-210ENST00000539413 ZMYND11Q15326 602 aa13.19□□□□□ -0.3
CIT-210ENST00000539413 PRSS45Q7RTY3 260 aa13.19□□□□□ -0.3
CIT-210ENST00000539413 MOGAT3Q86VF5 341 aa13.19□□□□□ -0.3
CIT-210ENST00000539413 ZDHHC13Q8IUH4 622 aa13.19□□□□□ -0.3
CIT-210ENST00000539413 OTOSQ8NHW6 89 aa13.19□□□□□ -0.3
CIT-210ENST00000539413 THEM6Q8WUY1 208 aa13.19□□□□□ -0.3
CIT-210ENST00000539413 GABARAPL1Q9H0R8 117 aa13.19□□□□□ -0.3
CIT-210ENST00000539413 SEMA6AQ9H2E6 1030 aa13.19□□□□□ -0.3
CIT-210ENST00000539413 DNAJC27Q9NZQ0 273 aa13.19□□□□□ -0.3
CIT-210ENST00000539413 KLHDC2Q9Y2U9 406 aa13.19□□□□□ -0.3
CIT-210ENST00000539413 M0R129 80 aa13.18□□□□□ -0.3
CIT-210ENST00000539413 XRCC2O43543 280 aa13.18□□□□□ -0.3
CIT-210ENST00000539413 PRKYO43930 277 aa13.18□□□□□ -0.3
CIT-210ENST00000539413 CYB5R3P00387 301 aaPredicted RBP13.18□□□□□ -0.3
CIT-210ENST00000539413 LYNP07948 512 aa13.18□□□□□ -0.3
CIT-210ENST00000539413 H2BFMP0C1H6 154 aa13.18□□□□□ -0.3
CIT-210ENST00000539413 PMELP40967 661 aa13.18□□□□□ -0.3
CIT-210ENST00000539413 ZNF121P58317 390 aaPredicted RBP13.18□□□□□ -0.3
CIT-210ENST00000539413 TMEM155Q4W5P6 130 aa13.18□□□□□ -0.3
CIT-210ENST00000539413 KDM4DQ6B0I6 523 aa13.18□□□□□ -0.3
CIT-210ENST00000539413 FAM57BQ71RH2 274 aa13.18□□□□□ -0.3
CIT-210ENST00000539413 RHOUQ7L0Q8 258 aa13.18□□□□□ -0.3
CIT-210ENST00000539413 LRRC28Q86X40 367 aaPredicted RBP13.18□□□□□ -0.3
CIT-210ENST00000539413 ZNF454Q8N9F8 522 aa13.18□□□□□ -0.3
CIT-210ENST00000539413 SPSB4Q96A44 273 aa13.18□□□□□ -0.3
CIT-210ENST00000539413 SGK3Q96BR1 496 aa13.18□□□□□ -0.3
CIT-210ENST00000539413 G6PC2Q9NQR9 355 aa13.18□□□□□ -0.3
CIT-210ENST00000539413 ZNF319Q9P2F9 582 aa13.18□□□□□ -0.3
CIT-210ENST00000539413 CCDC182A6NF36 153 aa13.17□□□□□ -0.3
CIT-210ENST00000539413 IFNL4K9M1U5 179 aa13.17□□□□□ -0.3
CIT-210ENST00000539413 ZNF205O95201 554 aa13.17□□□□□ -0.3
CIT-210ENST00000539413 APOC1P02654 83 aa13.17□□□□□ -0.3
CIT-210ENST00000539413 SRP14P37108 136 aaKnown RBP13.17□□□□□ -0.3
CIT-210ENST00000539413 CD200P41217 278 aa13.17□□□□□ -0.3
CIT-210ENST00000539413 HCCSP53701 268 aa13.17□□□□□ -0.3
CIT-210ENST00000539413 RAD23AP54725 363 aa13.17□□□□□ -0.3
CIT-210ENST00000539413 OR8G1Q15617 311 aa13.17□□□□□ -0.3
CIT-210ENST00000539413 PRAMEF6Q5VXH4 476 aa13.17□□□□□ -0.3
CIT-210ENST00000539413 SLX4IPQ5VYV7 408 aa13.17□□□□□ -0.3
CIT-210ENST00000539413 FAHD2BQ6P2I3 314 aaPredicted RBP13.17□□□□□ -0.3
CIT-210ENST00000539413 CCDC121Q6ZUS5 278 aa13.17□□□□□ -0.3
CIT-210ENST00000539413 SLC16A9Q7RTY1 509 aa13.17□□□□□ -0.3
CIT-210ENST00000539413 BCDIN3DQ7Z5W3 292 aaKnown RBP13.17□□□□□ -0.3
CIT-210ENST00000539413 SPICQ8N5J4 248 aa13.17□□□□□ -0.3
CIT-210ENST00000539413 OR56B2PQ8NGI1 322 aa13.17□□□□□ -0.3
CIT-210ENST00000539413 PYDC1Q8WXC3 89 aa13.17□□□□□ -0.3
CIT-210ENST00000539413 DVL3Q92997 716 aaPredicted RBP13.17□□□□□ -0.3
CIT-210ENST00000539413 FAHD2AQ96GK7 314 aa13.17□□□□□ -0.3
CIT-210ENST00000539413 TEAD3Q99594 435 aa13.17□□□□□ -0.3
CIT-210ENST00000539413 CIB1Q99828 191 aa13.17□□□□□ -0.3
CIT-210ENST00000539413 ADAT1Q9BUB4 502 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms