RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	HLX	Q14774	488 aa	Predicted RBP	10.4	□□□□□ -0.74
CLTCL1-205	ENST00000538828	PTGES3	Q15185	160 aa	Known RBP	10.4	□□□□□ -0.74
CLTCL1-205	ENST00000538828	TAF13	Q15543	124 aa		10.4	□□□□□ -0.74
CLTCL1-205	ENST00000538828	FAM120AOS	Q5T036	256 aa		10.4	□□□□□ -0.74
CLTCL1-205	ENST00000538828	OR2T2	Q6IF00	324 aa		10.4	□□□□□ -0.74
CLTCL1-205	ENST00000538828	ZFP1	Q6P2D0	407 aa		10.4	□□□□□ -0.74
CLTCL1-205	ENST00000538828	MRPL21	Q7Z2W9	205 aa	Known RBP	10.4	□□□□□ -0.74
CLTCL1-205	ENST00000538828	LRRC28	Q86X40	367 aa	Predicted RBP	10.4	□□□□□ -0.74
CLTCL1-205	ENST00000538828	CPO	Q8IVL8	374 aa		10.4	□□□□□ -0.74
CLTCL1-205	ENST00000538828	C1orf87	Q8N0U7	546 aa		10.4	□□□□□ -0.74
CLTCL1-205	ENST00000538828	SPIC	Q8N5J4	248 aa		10.4	□□□□□ -0.74
CLTCL1-205	ENST00000538828	OR6N2	Q8NGY6	317 aa		10.4	□□□□□ -0.74
CLTCL1-205	ENST00000538828		Q8TCH9	128 aa		10.4	□□□□□ -0.74
CLTCL1-205	ENST00000538828	TMEM186	Q96B77	213 aa		10.4	□□□□□ -0.74
CLTCL1-205	ENST00000538828	CENPN	Q96H22	339 aa	Predicted RBP	10.4	□□□□□ -0.74
CLTCL1-205	ENST00000538828	MEGF10	Q96KG7	1140 aa		10.4	□□□□□ -0.74
CLTCL1-205	ENST00000538828	OR2V2	Q96R30	315 aa		10.4	□□□□□ -0.74
CLTCL1-205	ENST00000538828	MNT	Q99583	582 aa		10.4	□□□□□ -0.74
CLTCL1-205	ENST00000538828	ABHD6	Q9BV23	337 aa		10.4	□□□□□ -0.74
CLTCL1-205	ENST00000538828	YIPF3	Q9GZM5	350 aa		10.4	□□□□□ -0.74
CLTCL1-205	ENST00000538828	ZNF665	Q9H7R5	613 aa		10.4	□□□□□ -0.74
CLTCL1-205	ENST00000538828	TMEFF2	Q9UIK5	374 aa	Predicted RBP	10.4	□□□□□ -0.74
CLTCL1-205	ENST00000538828	PPP1R3C	Q9UQK1	317 aa		10.4	□□□□□ -0.74
CLTCL1-205	ENST00000538828	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	10.4	□□□□□ -0.74
CLTCL1-205	ENST00000538828	DOCK11	Q5JSL3	2073 aa		10.39	□□□□□ -0.75
CLTCL1-205	ENST00000538828	CD300LB	A8K4G0	201 aa		10.39	□□□□□ -0.75
CLTCL1-205	ENST00000538828		J3QLI3	93 aa		10.39	□□□□□ -0.75
CLTCL1-205	ENST00000538828	IGHV2-70	P01814	119 aa		10.39	□□□□□ -0.75
CLTCL1-205	ENST00000538828	LYN	P07948	512 aa		10.39	□□□□□ -0.75
CLTCL1-205	ENST00000538828	ACTR3	P61158	418 aa		10.39	□□□□□ -0.75
CLTCL1-205	ENST00000538828	SCGB2A2	Q13296	93 aa		10.39	□□□□□ -0.75
CLTCL1-205	ENST00000538828	CCNI	Q14094	377 aa		10.39	□□□□□ -0.75
CLTCL1-205	ENST00000538828	EIF2B1	Q14232	305 aa	Known RBP	10.39	□□□□□ -0.75
CLTCL1-205	ENST00000538828	SNAPC1	Q16533	368 aa		10.39	□□□□□ -0.75
CLTCL1-205	ENST00000538828	CR1L	Q2VPA4	569 aa		10.39	□□□□□ -0.75
CLTCL1-205	ENST00000538828	LCN1P1	Q5VSP4	162 aa		10.39	□□□□□ -0.75
CLTCL1-205	ENST00000538828	PLBD1	Q6P4A8	553 aa		10.39	□□□□□ -0.75
CLTCL1-205	ENST00000538828	LYPD4	Q6UWN0	246 aa		10.39	□□□□□ -0.75
CLTCL1-205	ENST00000538828	CCDC121	Q6ZUS5	278 aa		10.39	□□□□□ -0.75
CLTCL1-205	ENST00000538828	CXXC5	Q7LFL8	322 aa	Known RBP	10.39	□□□□□ -0.75
CLTCL1-205	ENST00000538828	PRSS45	Q7RTY3	260 aa		10.39	□□□□□ -0.75
CLTCL1-205	ENST00000538828	NAA40	Q86UY6	237 aa		10.39	□□□□□ -0.75
CLTCL1-205	ENST00000538828	ERI1	Q8IV48	349 aa	Known RBP	10.39	□□□□□ -0.75
CLTCL1-205	ENST00000538828	MUC20	Q8N307	709 aa	Predicted RBP	10.39	□□□□□ -0.75
CLTCL1-205	ENST00000538828	ITLN1	Q8WWA0	313 aa		10.39	□□□□□ -0.75
CLTCL1-205	ENST00000538828	SIGLEC11	Q96RL6	698 aa		10.39	□□□□□ -0.75
CLTCL1-205	ENST00000538828	OR51V1	Q9H2C8	321 aa		10.39	□□□□□ -0.75
CLTCL1-205	ENST00000538828	GCM1	Q9NP62	436 aa		10.39	□□□□□ -0.75
CLTCL1-205	ENST00000538828	KRT84	Q9NSB2	600 aa		10.39	□□□□□ -0.75
CLTCL1-205	ENST00000538828	CENPM	Q9NSP4	180 aa		10.39	□□□□□ -0.75
CLTCL1-205	ENST00000538828	HAO2	Q9NYQ3	351 aa		10.39	□□□□□ -0.75
CLTCL1-205	ENST00000538828	TMEM14A	Q9Y6G1	99 aa		10.39	□□□□□ -0.75
CLTCL1-205	ENST00000538828	LRRC30	A6NM36	301 aa		10.38	□□□□□ -0.75
CLTCL1-205	ENST00000538828	ZAR1L	A6NP61	321 aa		10.38	□□□□□ -0.75
CLTCL1-205	ENST00000538828	FAM157A	C9JC47	383 aa		10.38	□□□□□ -0.75
CLTCL1-205	ENST00000538828	TMEM178B	H3BS89	294 aa		10.38	□□□□□ -0.75
CLTCL1-205	ENST00000538828	WNT9B	O14905	357 aa		10.38	□□□□□ -0.75
CLTCL1-205	ENST00000538828	MLNR	O43193	412 aa		10.38	□□□□□ -0.75
CLTCL1-205	ENST00000538828	PSKH1	P11801	424 aa		10.38	□□□□□ -0.75
CLTCL1-205	ENST00000538828	SRD5A1	P18405	259 aa		10.38	□□□□□ -0.75
CLTCL1-205	ENST00000538828	ALOX5AP	P20292	161 aa		10.38	□□□□□ -0.75
CLTCL1-205	ENST00000538828	HSD11B1	P28845	292 aa		10.38	□□□□□ -0.75
CLTCL1-205	ENST00000538828	MDH2	P40926	338 aa	Known RBP	10.38	□□□□□ -0.75
CLTCL1-205	ENST00000538828	RPS27	P42677	84 aa	Known RBP	10.38	□□□□□ -0.75
CLTCL1-205	ENST00000538828	ERF	P50548	548 aa		10.38	□□□□□ -0.75
CLTCL1-205	ENST00000538828	MVK	Q03426	396 aa		10.38	□□□□□ -0.75
CLTCL1-205	ENST00000538828	ZNF92	Q03936	586 aa		10.38	□□□□□ -0.75
CLTCL1-205	ENST00000538828	DBP	Q10586	325 aa	Predicted RBP	10.38	□□□□□ -0.75
CLTCL1-205	ENST00000538828	SNAI3	Q3KNW1	292 aa		10.38	□□□□□ -0.75
CLTCL1-205	ENST00000538828	SLX4IP	Q5VYV7	408 aa		10.38	□□□□□ -0.75
CLTCL1-205	ENST00000538828	NXNL2	Q5VZ03	156 aa		10.38	□□□□□ -0.75
CLTCL1-205	ENST00000538828	KRT74	Q7RTS7	529 aa		10.38	□□□□□ -0.75
CLTCL1-205	ENST00000538828	SLC16A9	Q7RTY1	509 aa		10.38	□□□□□ -0.75
CLTCL1-205	ENST00000538828	KLHL36	Q8N4N3	616 aa		10.38	□□□□□ -0.75
CLTCL1-205	ENST00000538828	SPRYD4	Q8WW59	207 aa	Predicted RBP	10.38	□□□□□ -0.75
CLTCL1-205	ENST00000538828	TEAD3	Q99594	435 aa		10.38	□□□□□ -0.75
CLTCL1-205	ENST00000538828	GAL3ST1	Q99999	423 aa		10.38	□□□□□ -0.75
CLTCL1-205	ENST00000538828	MED20	Q9H944	212 aa		10.38	□□□□□ -0.75
CLTCL1-205	ENST00000538828	TREM2	Q9NZC2	230 aa		10.38	□□□□□ -0.75
CLTCL1-205	ENST00000538828	CACNG2	Q9Y698	323 aa		10.38	□□□□□ -0.75
CLTCL1-205	ENST00000538828	ANK3	Q12955	4377 aa	Known RBP	10.37	□□□□□ -0.75
CLTCL1-205	ENST00000538828	SLC22A31	A6NKX4	558 aa		10.37	□□□□□ -0.75
CLTCL1-205	ENST00000538828		A8MXK9	166 aa		10.37	□□□□□ -0.75
CLTCL1-205	ENST00000538828	EBAG9	O00559	213 aa		10.37	□□□□□ -0.75
CLTCL1-205	ENST00000538828	ZNF254	O75437	659 aa		10.37	□□□□□ -0.75
CLTCL1-205	ENST00000538828	FOXH1	O75593	365 aa		10.37	□□□□□ -0.75
CLTCL1-205	ENST00000538828	CX3CR1	P49238	355 aa		10.37	□□□□□ -0.75
CLTCL1-205	ENST00000538828	MMP16	P51512	607 aa		10.37	□□□□□ -0.75
CLTCL1-205	ENST00000538828	PRKX	P51817	358 aa		10.37	□□□□□ -0.75
CLTCL1-205	ENST00000538828	RAD23A	P54725	363 aa		10.37	□□□□□ -0.75
CLTCL1-205	ENST00000538828	BTG1	P62324	171 aa		10.37	□□□□□ -0.75
CLTCL1-205	ENST00000538828	ROM1	Q03395	351 aa		10.37	□□□□□ -0.75
CLTCL1-205	ENST00000538828	TMED1	Q13445	227 aa		10.37	□□□□□ -0.75
CLTCL1-205	ENST00000538828	KLHL12	Q53G59	568 aa		10.37	□□□□□ -0.75
CLTCL1-205	ENST00000538828	GLYATL3	Q5SZD4	288 aa		10.37	□□□□□ -0.75
CLTCL1-205	ENST00000538828	C12orf73	Q69YU5	71 aa		10.37	□□□□□ -0.75
CLTCL1-205	ENST00000538828	KCTD18	Q6PI47	426 aa	Predicted RBP	10.37	□□□□□ -0.75
CLTCL1-205	ENST00000538828	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	10.37	□□□□□ -0.75
CLTCL1-205	ENST00000538828	OR5AS1	Q8N127	324 aa		10.37	□□□□□ -0.75
CLTCL1-205	ENST00000538828	FTMT	Q8N4E7	242 aa		10.37	□□□□□ -0.75

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