RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 FAHP16930 419 aa12.38□□□□□ -0.43
ACTN1-205ENST00000538545 PTBP1P26599 531 aaKnown RBP eCLIP12.38□□□□□ -0.431e-7■■■■■ 30.8
ACTN1-205ENST00000538545 CLN3Q13286 438 aa12.38□□□□□ -0.43
ACTN1-205ENST00000538545 ELFN2Q5R3F8 820 aa12.38□□□□□ -0.43
ACTN1-205ENST00000538545 ZNF813Q6ZN06 617 aa12.38□□□□□ -0.43
ACTN1-205ENST00000538545 NUFIP2Q7Z417 695 aaKnown RBP12.38□□□□□ -0.43
ACTN1-205ENST00000538545 AKAP14Q86UN6 197 aa12.38□□□□□ -0.43
ACTN1-205ENST00000538545 ZFP62Q8NB50 900 aaPredicted RBP12.38□□□□□ -0.43
ACTN1-205ENST00000538545 ACBD4Q8NC06 268 aa12.38□□□□□ -0.43
ACTN1-205ENST00000538545 NAXEQ8NCW5 288 aa12.38□□□□□ -0.43
ACTN1-205ENST00000538545 SMIM4Q8WVI0 70 aa12.38□□□□□ -0.43
ACTN1-205ENST00000538545 ZNF799Q96GE5 643 aa12.38□□□□□ -0.43
ACTN1-205ENST00000538545 GPR35Q9HC97 309 aa12.38□□□□□ -0.43
ACTN1-205ENST00000538545 FLVCR2Q9UPI3 526 aa12.38□□□□□ -0.43
ACTN1-205ENST00000538545 MRPS18CQ9Y3D5 142 aaKnown RBP12.38□□□□□ -0.43
ACTN1-205ENST00000538545 CCNKO75909 580 aa12.37□□□□□ -0.43
ACTN1-205ENST00000538545 GLT8D1Q68CQ7 371 aa12.37□□□□□ -0.43
ACTN1-205ENST00000538545 EGFL6Q8IUX8 553 aa12.37□□□□□ -0.43
ACTN1-205ENST00000538545 BEST4Q8NFU0 473 aa12.37□□□□□ -0.43
ACTN1-205ENST00000538545 HAS2Q92819 552 aa12.37□□□□□ -0.43
ACTN1-205ENST00000538545 PNPLA2Q96AD5 504 aa12.37□□□□□ -0.43
ACTN1-205ENST00000538545 SGCEO43556 437 aa12.37□□□□□ -0.43
ACTN1-205ENST00000538545 SLC6A1P30531 599 aa12.37□□□□□ -0.43
ACTN1-205ENST00000538545 NR4A2P43354 598 aa12.37□□□□□ -0.43
ACTN1-205ENST00000538545 MRPS34P82930 218 aaKnown RBP12.37□□□□□ -0.43
ACTN1-205ENST00000538545 PSG4Q00888 419 aa12.37□□□□□ -0.43
ACTN1-205ENST00000538545 CAMK2BQ13554 666 aa12.37□□□□□ -0.43
ACTN1-205ENST00000538545 FAM27BQ5VT28 67 aa12.37□□□□□ -0.43
ACTN1-205ENST00000538545 MZT2BQ6NZ67 158 aa12.37□□□□□ -0.43
ACTN1-205ENST00000538545 ZNF627Q7L945 461 aa12.37□□□□□ -0.43
ACTN1-205ENST00000538545 SLC22A24Q8N4F4 322 aa12.37□□□□□ -0.43
ACTN1-205ENST00000538545 OR1M1Q8NGA1 313 aa12.37□□□□□ -0.43
ACTN1-205ENST00000538545 FYTTD1Q96QD9 318 aaKnown RBP12.37□□□□□ -0.43
ACTN1-205ENST00000538545 B3GNT4Q9C0J1 378 aa12.37□□□□□ -0.43
ACTN1-205ENST00000538545 RHBDD3Q9Y3P4 386 aa12.37□□□□□ -0.43
ACTN1-205ENST00000538545 ALG5Q9Y673 324 aa12.37□□□□□ -0.43
ACTN1-205ENST00000538545 INTS1Q8N201 2190 aaKnown RBP12.37□□□□□ -0.43
ACTN1-205ENST00000538545 PCNX1Q96RV3 2341 aa12.36□□□□□ -0.43
ACTN1-205ENST00000538545 IGKV1-9A0A0C4DH69 117 aa12.36□□□□□ -0.43
ACTN1-205ENST00000538545 CEACAM1P13688 526 aa12.36□□□□□ -0.43
ACTN1-205ENST00000538545 ZNF20P17024 532 aa12.36□□□□□ -0.43
ACTN1-205ENST00000538545 CCNOP22674 350 aa12.36□□□□□ -0.43
ACTN1-205ENST00000538545 BDKRB2P30411 391 aa12.36□□□□□ -0.43
ACTN1-205ENST00000538545 ZNF133P52736 654 aaPredicted RBP12.36□□□□□ -0.43
ACTN1-205ENST00000538545 GCNT2Q8N0V5 402 aa12.36□□□□□ -0.43
ACTN1-205ENST00000538545 OR4D10Q8NGI6 311 aa12.36□□□□□ -0.43
ACTN1-205ENST00000538545 DVL3Q92997 716 aaPredicted RBP12.36□□□□□ -0.43
ACTN1-205ENST00000538545 CDV3Q9UKY7 258 aaKnown RBP12.36□□□□□ -0.43
ACTN1-205ENST00000538545 LOC100289279A0A1B0GTE1 492 aa12.36□□□□□ -0.43
ACTN1-205ENST00000538545 DNPH1O43598 174 aa12.36□□□□□ -0.43
ACTN1-205ENST00000538545 HLA-HP01893 362 aa12.36□□□□□ -0.43
ACTN1-205ENST00000538545 FSTP19883 344 aa12.36□□□□□ -0.43
ACTN1-205ENST00000538545 OR3A4PP47883 348 aa12.36□□□□□ -0.43
ACTN1-205ENST00000538545 CD83Q01151 205 aa12.36□□□□□ -0.43
ACTN1-205ENST00000538545 FAPQ12884 760 aa12.36□□□□□ -0.43
ACTN1-205ENST00000538545 PLA1AQ53H76 456 aa12.36□□□□□ -0.43
ACTN1-205ENST00000538545 FOXL2NBQ6ZUU3 175 aa12.36□□□□□ -0.43
ACTN1-205ENST00000538545 SLC16A14Q7RTX9 510 aa12.36□□□□□ -0.43
ACTN1-205ENST00000538545 NIPAL2Q9H841 368 aa12.36□□□□□ -0.43
ACTN1-205ENST00000538545 PLEKHA1Q9HB21 404 aa12.36□□□□□ -0.43
ACTN1-205ENST00000538545 MCUBQ9NWR8 336 aa12.36□□□□□ -0.43
ACTN1-205ENST00000538545 PRSS50Q9UI38 385 aa12.36□□□□□ -0.43
ACTN1-205ENST00000538545 CIB4A0PJX0 185 aa12.35□□□□□ -0.43
ACTN1-205ENST00000538545 WIPF3A6NGB9 483 aa12.35□□□□□ -0.43
ACTN1-205ENST00000538545 HTR5AP47898 357 aa12.35□□□□□ -0.43
ACTN1-205ENST00000538545 NUBP1P53384 320 aa12.35□□□□□ -0.43
ACTN1-205ENST00000538545 RRADP55042 308 aa12.35□□□□□ -0.43
ACTN1-205ENST00000538545 PITPNAQ00169 270 aa12.35□□□□□ -0.43
ACTN1-205ENST00000538545 KLF9Q13886 244 aaPredicted RBP12.35□□□□□ -0.43
ACTN1-205ENST00000538545 TBRG1Q3YBR2 411 aa12.35□□□□□ -0.43
ACTN1-205ENST00000538545 LYPD6Q86Y78 171 aa12.35□□□□□ -0.43
ACTN1-205ENST00000538545 ADGRG4Q8IZF6 3080 aa12.35□□□□□ -0.43
ACTN1-205ENST00000538545 OR5AS1Q8N127 324 aa12.35□□□□□ -0.43
ACTN1-205ENST00000538545 MEIOBQ8N635 442 aa12.35□□□□□ -0.43
ACTN1-205ENST00000538545 DUSP18Q8NEJ0 188 aa12.35□□□□□ -0.43
ACTN1-205ENST00000538545 OR8S1Q8NH09 359 aa12.35□□□□□ -0.43
ACTN1-205ENST00000538545 PAQR5Q9NXK6 330 aaPredicted RBP12.35□□□□□ -0.43
ACTN1-205ENST00000538545 TRGV5A0A0B4J1U4 118 aa12.35□□□□□ -0.43
ACTN1-205ENST00000538545 GGT3PA6NGU5 568 aa12.35□□□□□ -0.43
ACTN1-205ENST00000538545 INMT-MINDY4F8WBC2 141 aa12.35□□□□□ -0.43
ACTN1-205ENST00000538545 CD82P27701 267 aa12.35□□□□□ -0.43
ACTN1-205ENST00000538545 GRB2P62993 217 aaKnown RBP12.35□□□□□ -0.43
ACTN1-205ENST00000538545 ARF1P84077 181 aaKnown RBP12.35□□□□□ -0.43
ACTN1-205ENST00000538545 SNTB2Q13425 540 aaKnown RBP12.35□□□□□ -0.43
ACTN1-205ENST00000538545 UNC119Q13432 240 aa12.35□□□□□ -0.43
ACTN1-205ENST00000538545 ANKRD16Q6P6B7 361 aa12.35□□□□□ -0.43
ACTN1-205ENST00000538545 ANGPTL5Q86XS5 388 aa12.35□□□□□ -0.43
ACTN1-205ENST00000538545 FAM109AQ8N4B1 249 aa12.35□□□□□ -0.43
ACTN1-205ENST00000538545 PAQR4Q8N4S7 273 aaPredicted RBP12.35□□□□□ -0.43
ACTN1-205ENST00000538545 CPEB3Q8NE35 698 aaKnown RBP12.35□□□□□ -0.43
ACTN1-205ENST00000538545 MS4A3Q96HJ5 214 aa12.35□□□□□ -0.43
ACTN1-205ENST00000538545 NICN1Q9BSH3 213 aa12.35□□□□□ -0.43
ACTN1-205ENST00000538545 SLCO5A1Q9H2Y9 848 aa12.35□□□□□ -0.43
ACTN1-205ENST00000538545 BANF2Q9H503 90 aa12.35□□□□□ -0.43
ACTN1-205ENST00000538545 RANGRFQ9HD47 186 aaPredicted RBP12.35□□□□□ -0.43
ACTN1-205ENST00000538545 K7EM74 188 aa12.34□□□□□ -0.43
ACTN1-205ENST00000538545 SYNGR3O43761 229 aa12.34□□□□□ -0.43
ACTN1-205ENST00000538545 SYNGR4O95473 234 aa12.34□□□□□ -0.43
ACTN1-205ENST00000538545 ALDOBP05062 364 aa12.34□□□□□ -0.43
ACTN1-205ENST00000538545 NR2C1P13056 603 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms