RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 HIF1ANQ9NWT6 349 aa14.5□□□□□ -0.09
SFSWAP-205ENST00000537164 AP4S1Q9Y587 144 aa14.5□□□□□ -0.09
SFSWAP-205ENST00000537164 WNK2Q9Y3S1 2297 aa14.49□□□□□ -0.09
SFSWAP-205ENST00000537164 TMEM178BH3BS89 294 aa14.49□□□□□ -0.09
SFSWAP-205ENST00000537164 APOC1P02654 83 aa14.49□□□□□ -0.09
SFSWAP-205ENST00000537164 FASP25445 335 aa14.49□□□□□ -0.09
SFSWAP-205ENST00000537164 MMP16P51512 607 aa14.49□□□□□ -0.09
SFSWAP-205ENST00000537164 PRKXP51817 358 aa14.49□□□□□ -0.09
SFSWAP-205ENST00000537164 EIF2B1Q14232 305 aaKnown RBP14.49□□□□□ -0.09
SFSWAP-205ENST00000537164 TMEM155Q4W5P6 130 aa14.49□□□□□ -0.09
SFSWAP-205ENST00000537164 TMEM236Q5W0B7 351 aa14.49□□□□□ -0.09
SFSWAP-205ENST00000537164 IL17RELQ6ZVW7 336 aa14.49□□□□□ -0.09
SFSWAP-205ENST00000537164 PRSS45Q7RTY3 260 aa14.49□□□□□ -0.09
SFSWAP-205ENST00000537164 MRPL21Q7Z2W9 205 aaKnown RBP14.49□□□□□ -0.09
SFSWAP-205ENST00000537164 LRRC28Q86X40 367 aaPredicted RBP14.49□□□□□ -0.09
SFSWAP-205ENST00000537164 CPOQ8IVL8 374 aa14.49□□□□□ -0.09
SFSWAP-205ENST00000537164 OTOSQ8NHW6 89 aa14.49□□□□□ -0.09
SFSWAP-205ENST00000537164 GAL3ST1Q99999 423 aa14.49□□□□□ -0.09
SFSWAP-205ENST00000537164 SLC22A4Q9H015 551 aa14.49□□□□□ -0.09
SFSWAP-205ENST00000537164 GABARAPL1Q9H0R8 117 aa14.49□□□□□ -0.09
SFSWAP-205ENST00000537164 OR51V1Q9H2C8 321 aa14.49□□□□□ -0.09
SFSWAP-205ENST00000537164 G6PC2Q9NQR9 355 aa14.49□□□□□ -0.09
SFSWAP-205ENST00000537164 KIF17Q9P2E2 1029 aa14.49□□□□□ -0.09
SFSWAP-205ENST00000537164 STAB1Q9NY15 2570 aa14.49□□□□□ -0.09
SFSWAP-205ENST00000537164 C5orf63A6NC05 138 aa14.48□□□□□ -0.09
SFSWAP-205ENST00000537164 CD300LBA8K4G0 201 aa14.48□□□□□ -0.09
SFSWAP-205ENST00000537164 G3V2T6 193 aa14.48□□□□□ -0.09
SFSWAP-205ENST00000537164 XRCC2O43543 280 aa14.48□□□□□ -0.09
SFSWAP-205ENST00000537164 PLPP2O43688 288 aa14.48□□□□□ -0.09
SFSWAP-205ENST00000537164 PTBP3O95758 552 aaKnown RBP14.48□□□□□ -0.09
SFSWAP-205ENST00000537164 FCGR1AP12314 374 aa14.48□□□□□ -0.09
SFSWAP-205ENST00000537164 OPRL1P41146 370 aa14.48□□□□□ -0.09
SFSWAP-205ENST00000537164 CD200P41217 278 aa14.48□□□□□ -0.09
SFSWAP-205ENST00000537164 BTG1P62324 171 aa14.48□□□□□ -0.09
SFSWAP-205ENST00000537164 EFNB1P98172 346 aa14.48□□□□□ -0.09
SFSWAP-205ENST00000537164 MAB21L1Q13394 359 aa14.48□□□□□ -0.09
SFSWAP-205ENST00000537164 PTGES3Q15185 160 aaKnown RBP14.48□□□□□ -0.09
SFSWAP-205ENST00000537164 TAF13Q15543 124 aa14.48□□□□□ -0.09
SFSWAP-205ENST00000537164 GLYATL3Q5SZD4 288 aa14.48□□□□□ -0.09
SFSWAP-205ENST00000537164 KDM4DQ6B0I6 523 aa14.48□□□□□ -0.09
SFSWAP-205ENST00000537164 ZNF454Q8N9F8 522 aa14.48□□□□□ -0.09
SFSWAP-205ENST00000537164 OR2AE1Q8NHA4 323 aa14.48□□□□□ -0.09
SFSWAP-205ENST00000537164 ERGIC1Q969X5 290 aa14.48□□□□□ -0.09
SFSWAP-205ENST00000537164 OTULINQ96BN8 352 aa14.48□□□□□ -0.09
SFSWAP-205ENST00000537164 ZMYND19Q96E35 227 aaPredicted RBP14.48□□□□□ -0.09
SFSWAP-205ENST00000537164 AMELYQ99218 206 aa14.48□□□□□ -0.09
SFSWAP-205ENST00000537164 MRPL15Q9P015 296 aaKnown RBP14.48□□□□□ -0.09
SFSWAP-205ENST00000537164 NOP16Q9Y3C1 178 aaKnown RBP14.48□□□□□ -0.09
SFSWAP-205ENST00000537164 PPIAL4EA0A075B759 164 aa14.47□□□□□ -0.09
SFSWAP-205ENST00000537164 PPIAL4CA0A0B4J2A2 164 aa14.47□□□□□ -0.09
SFSWAP-205ENST00000537164 PPIAL4DF5H284 164 aa14.47□□□□□ -0.09
SFSWAP-205ENST00000537164 F5H5P2 479 aa14.47□□□□□ -0.09
SFSWAP-205ENST00000537164 GMDSO60547 372 aa14.47□□□□□ -0.09
SFSWAP-205ENST00000537164 PPIAL4FP0DN26 164 aa14.47□□□□□ -0.09
SFSWAP-205ENST00000537164 CPT2P23786 658 aa14.47□□□□□ -0.09
SFSWAP-205ENST00000537164 PRSS12P56730 875 aa14.47□□□□□ -0.09
SFSWAP-205ENST00000537164 HNRNPA0Q13151 305 aaKnown RBP14.47□□□□□ -0.09
SFSWAP-205ENST00000537164 ZMYND11Q15326 602 aa14.47□□□□□ -0.09
SFSWAP-205ENST00000537164 CXXC5Q7LFL8 322 aaKnown RBP14.47□□□□□ -0.09
SFSWAP-205ENST00000537164 ZDHHC13Q8IUH4 622 aa14.47□□□□□ -0.09
SFSWAP-205ENST00000537164 SPICQ8N5J4 248 aa14.47□□□□□ -0.09
SFSWAP-205ENST00000537164 BBS1Q8NFJ9 593 aa14.47□□□□□ -0.09
SFSWAP-205ENST00000537164 Q8TCH9 128 aa14.47□□□□□ -0.09
SFSWAP-205ENST00000537164 SPRYD4Q8WW59 207 aaPredicted RBP14.47□□□□□ -0.09
SFSWAP-205ENST00000537164 PLEKHA8Q96JA3 519 aa14.47□□□□□ -0.09
SFSWAP-205ENST00000537164 SP140LQ9H930 580 aa14.47□□□□□ -0.09
SFSWAP-205ENST00000537164 LPAR2Q9HBW0 351 aa14.47□□□□□ -0.09
SFSWAP-205ENST00000537164 POLR3KQ9Y2Y1 108 aaPredicted RBP14.47□□□□□ -0.09
SFSWAP-205ENST00000537164 ARHGAP32A7KAX9 2087 aa14.46□□□□□ -0.09
SFSWAP-205ENST00000537164 ISPDA4D126 451 aa14.46□□□□□ -0.09
SFSWAP-205ENST00000537164 F5H0A9 414 aaPredicted RBP14.46□□□□□ -0.09
SFSWAP-205ENST00000537164 SELENOFO60613 162 aa14.46□□□□□ -0.09
SFSWAP-205ENST00000537164 PNPP00491 289 aa14.46□□□□□ -0.09
SFSWAP-205ENST00000537164 HLA-DPB1P04440 258 aa14.46□□□□□ -0.09
SFSWAP-205ENST00000537164 LYNP07948 512 aa14.46□□□□□ -0.09
SFSWAP-205ENST00000537164 SLC2A1P11166 492 aa14.46□□□□□ -0.09
SFSWAP-205ENST00000537164 GATA3P23771 443 aa14.46□□□□□ -0.09
SFSWAP-205ENST00000537164 HSD11B1P28845 292 aa14.46□□□□□ -0.09
SFSWAP-205ENST00000537164 DDOSTP39656 456 aa14.46□□□□□ -0.09
SFSWAP-205ENST00000537164 MDH2P40926 338 aaKnown RBP14.46□□□□□ -0.09
SFSWAP-205ENST00000537164 CX3CR1P49238 355 aa14.46□□□□□ -0.09
SFSWAP-205ENST00000537164 RAD23AP54725 363 aa14.46□□□□□ -0.09
SFSWAP-205ENST00000537164 SNAPC1Q16533 368 aa14.46□□□□□ -0.09
SFSWAP-205ENST00000537164 KLHL12Q53G59 568 aa14.46□□□□□ -0.09
SFSWAP-205ENST00000537164 KLBQ86Z14 1044 aa14.46□□□□□ -0.09
SFSWAP-205ENST00000537164 KLHL36Q8N4N3 616 aa14.46□□□□□ -0.09
SFSWAP-205ENST00000537164 PLPP7Q8NBV4 271 aa14.46□□□□□ -0.09
SFSWAP-205ENST00000537164 OR52H1Q8NGJ2 320 aa14.46□□□□□ -0.09
SFSWAP-205ENST00000537164 LRTOMTQ8WZ04 291 aa14.46□□□□□ -0.09
SFSWAP-205ENST00000537164 TEAD3Q99594 435 aa14.46□□□□□ -0.09
SFSWAP-205ENST00000537164 PATZ1Q9HBE1 687 aaKnown RBP14.46□□□□□ -0.09
SFSWAP-205ENST00000537164 KRT84Q9NSB2 600 aa14.46□□□□□ -0.09
SFSWAP-205ENST00000537164 TVP23BQ9NYZ1 205 aa14.46□□□□□ -0.09
SFSWAP-205ENST00000537164 ZAR1LA6NP61 321 aa14.45□□□□□ -0.1
SFSWAP-205ENST00000537164 J3QLI3 93 aa14.45□□□□□ -0.1
SFSWAP-205ENST00000537164 SBK2P0C263 348 aa14.45□□□□□ -0.1
SFSWAP-205ENST00000537164 ALOX5APP20292 161 aa14.45□□□□□ -0.1
SFSWAP-205ENST00000537164 CA6P23280 308 aa14.45□□□□□ -0.1
SFSWAP-205ENST00000537164 RBMXP38159 391 aaKnown RBP14.45□□□□□ -0.1
SFSWAP-205ENST00000537164 PMELP40967 661 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms