RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 CST6Q15828 149 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 FAM74A3Q4VXF1 159 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 TRMT12Q53H54 448 aaKnown RBP5.22□□□□□ -1.57
CHD4-206ENST00000536999 DCAF12L2Q5VW00 463 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 FBXO42Q6P3S6 717 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 FIGNL1Q6PIW4 674 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 KIRREL2Q6UWL6 708 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 RNF44Q7L0R7 432 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 VN1R4Q7Z5H5 301 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 TRAPPC6BQ86SZ2 158 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 ATG4DQ86TL0 474 aaPredicted RBP5.22□□□□□ -1.57
CHD4-206ENST00000536999 NAA40Q86UY6 237 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 CATSPERDQ86XM0 798 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 MEX3DQ86XN8 651 aaKnown RBP5.22□□□□□ -1.57
CHD4-206ENST00000536999 SGPP2Q8IWX5 399 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 C9orf40Q8IXQ3 194 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 CARFQ8N187 725 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 JAGN1Q8N5M9 183 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 CSNK1A1LQ8N752 337 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 AMER3Q8N944 861 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 RELL2Q8NC24 303 aaPredicted RBP5.22□□□□□ -1.57
CHD4-206ENST00000536999 OR13C3Q8NGS6 347 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 OR5H2Q8NGV7 314 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 OR4K15Q8NH41 348 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 OR52N5Q8NH56 324 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 LYPD6BQ8NI32 183 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 ZNF563Q8TA94 476 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 BAHD1Q8TBE0 780 aaPredicted RBP5.22□□□□□ -1.57
CHD4-206ENST00000536999 RXFP4Q8TDU9 374 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 PCNPQ8WW12 178 aaKnown RBP5.22□□□□□ -1.57
CHD4-206ENST00000536999 C3orf49Q96BT1 292 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 INTS12Q96CB8 462 aaKnown RBP5.22□□□□□ -1.57
CHD4-206ENST00000536999 VSTM2LQ96N03 204 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 PFDN5Q99471 154 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 GFI1Q99684 422 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 CMKLR1Q99788 373 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 APOOQ9BUR5 198 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 GPR174Q9BXC1 333 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 CHRNA10Q9GZZ6 450 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 TOLLIPQ9H0E2 274 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 TLNRD1Q9H1K6 362 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 SLC35B3Q9H1N7 401 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 DUSP15Q9H1R2 295 aaPredicted RBP5.22□□□□□ -1.57
CHD4-206ENST00000536999 TXNIPQ9H3M7 391 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 ZNF768Q9H5H4 540 aaKnown RBP5.22□□□□□ -1.57
CHD4-206ENST00000536999 NIT2Q9NQR4 276 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 GFOD1Q9NXC2 390 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 ANKRD10Q9NXR5 420 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 FLRT3Q9NZU0 649 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 KCNE5Q9UJ90 142 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 TCFL5Q9UL49 500 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 RNF150Q9ULK6 438 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 MMACHCQ9Y4U1 282 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 LRRK2Q5S007 2527 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 COL12A1Q99715 3063 aa5.22□□□□□ -1.57
CHD4-206ENST00000536999 CCDC163A0A0D9SF12 145 aa5.21□□□□□ -1.58
CHD4-206ENST00000536999 MEX3AA1L020 520 aaKnown RBP5.21□□□□□ -1.58
CHD4-206ENST00000536999 OR6C76A6NM76 312 aa5.21□□□□□ -1.58
CHD4-206ENST00000536999 COLCA2A8K830 154 aa5.21□□□□□ -1.58
CHD4-206ENST00000536999 A8MVM7 634 aa5.21□□□□□ -1.58
CHD4-206ENST00000536999 PATE3B3GLJ2 98 aa5.21□□□□□ -1.58
CHD4-206ENST00000536999 EEF1E1-BLOC1S5C9J1V9 151 aa5.21□□□□□ -1.58
CHD4-206ENST00000536999 TSTD3H0UI37 97 aa5.21□□□□□ -1.58
CHD4-206ENST00000536999 H0YIG0 161 aa5.21□□□□□ -1.58
CHD4-206ENST00000536999 RAB27BO00194 218 aa5.21□□□□□ -1.58
CHD4-206ENST00000536999 GPR31O00270 319 aa5.21□□□□□ -1.58
CHD4-206ENST00000536999 DVL2O14641 736 aa5.21□□□□□ -1.58
CHD4-206ENST00000536999 SCAMP1O15126 338 aa5.21□□□□□ -1.58
CHD4-206ENST00000536999 CCL16O15467 120 aa5.21□□□□□ -1.58
CHD4-206ENST00000536999 SPINT1O43278 529 aa5.21□□□□□ -1.58
CHD4-206ENST00000536999 MED6O75586 246 aa5.21□□□□□ -1.58
CHD4-206ENST00000536999 AHSA1O95433 338 aa5.21□□□□□ -1.58
CHD4-206ENST00000536999 IFNA2P01563 188 aa5.21□□□□□ -1.58
CHD4-206ENST00000536999 MBPP02686 304 aaPredicted RBP5.21□□□□□ -1.58
CHD4-206ENST00000536999 FCGR3AP08637 254 aa5.21□□□□□ -1.58
CHD4-206ENST00000536999 SPARCP09486 303 aa5.21□□□□□ -1.58
CHD4-206ENST00000536999 FAM157CP0CG43 387 aa5.21□□□□□ -1.58
CHD4-206ENST00000536999 GP1BBP13224 206 aa5.21□□□□□ -1.58
CHD4-206ENST00000536999 RAB5AP20339 215 aa5.21□□□□□ -1.58
CHD4-206ENST00000536999 LAP3P28838 519 aa5.21□□□□□ -1.58
CHD4-206ENST00000536999 SERPINF1P36955 418 aa5.21□□□□□ -1.58
CHD4-206ENST00000536999 AQP2P41181 271 aa5.21□□□□□ -1.58
CHD4-206ENST00000536999 PTGFRP43088 359 aa5.21□□□□□ -1.58
CHD4-206ENST00000536999 BLKP51451 505 aa5.21□□□□□ -1.58
CHD4-206ENST00000536999 POLR2HP52434 150 aaKnown RBP5.21□□□□□ -1.58
CHD4-206ENST00000536999 ZNF133P52736 654 aaPredicted RBP5.21□□□□□ -1.58
CHD4-206ENST00000536999 UCP2P55851 309 aa5.21□□□□□ -1.58
CHD4-206ENST00000536999 SUMO3P55854 103 aaPredicted RBP5.21□□□□□ -1.58
CHD4-206ENST00000536999 CLDN12P56749 244 aa5.21□□□□□ -1.58
CHD4-206ENST00000536999 PSG6Q00889 435 aa5.21□□□□□ -1.58
CHD4-206ENST00000536999 MGAT2Q10469 447 aa5.21□□□□□ -1.58
CHD4-206ENST00000536999 PNRC1Q12796 327 aaPredicted RBP5.21□□□□□ -1.58
CHD4-206ENST00000536999 ZP4Q12836 540 aa5.21□□□□□ -1.58
CHD4-206ENST00000536999 PPP1R1AQ13522 171 aa5.21□□□□□ -1.58
CHD4-206ENST00000536999 RUNX2Q13950 521 aa5.21□□□□□ -1.58
CHD4-206ENST00000536999 IL13RA2Q14627 380 aa5.21□□□□□ -1.58
CHD4-206ENST00000536999 GRM7Q14831 915 aa5.21□□□□□ -1.58
CHD4-206ENST00000536999 NFATC4Q14934 902 aa5.21□□□□□ -1.58
CHD4-206ENST00000536999 ZNF239Q16600 458 aaKnown RBP5.21□□□□□ -1.58
CHD4-206ENST00000536999 MEP1BQ16820 701 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms