RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 ATRQ13535 2644 aa11.12□□□□□ -0.63
PRKDC-206ENST00000536429 CD300LBA8K4G0 201 aa11.11□□□□□ -0.63
PRKDC-206ENST00000536429 PRR32B1ATL7 298 aa11.11□□□□□ -0.63
PRKDC-206ENST00000536429 PRODHO43272 600 aa11.11□□□□□ -0.63
PRKDC-206ENST00000536429 MRPL3P09001 348 aaKnown RBP11.11□□□□□ -0.63
PRKDC-206ENST00000536429 TNFSF4P23510 183 aa11.11□□□□□ -0.63
PRKDC-206ENST00000536429 CX3CR1P49238 355 aa11.11□□□□□ -0.63
PRKDC-206ENST00000536429 RPS7P62081 194 aaKnown RBP11.11□□□□□ -0.63
PRKDC-206ENST00000536429 EFNB1P98172 346 aa11.11□□□□□ -0.63
PRKDC-206ENST00000536429 MALLQ13021 153 aa11.11□□□□□ -0.63
PRKDC-206ENST00000536429 SLX4IPQ5VYV7 408 aa11.11□□□□□ -0.63
PRKDC-206ENST00000536429 C12orf73Q69YU5 71 aa11.11□□□□□ -0.63
PRKDC-206ENST00000536429 PGAP1Q75T13 922 aa11.11□□□□□ -0.63
PRKDC-206ENST00000536429 PRSS45Q7RTY3 260 aa11.11□□□□□ -0.63
PRKDC-206ENST00000536429 MRPL21Q7Z2W9 205 aaKnown RBP11.11□□□□□ -0.63
PRKDC-206ENST00000536429 OTOSQ8NHW6 89 aa11.11□□□□□ -0.63
PRKDC-206ENST00000536429 ZNF420Q8TAQ5 688 aaPredicted RBP11.11□□□□□ -0.63
PRKDC-206ENST00000536429 DVL3Q92997 716 aaPredicted RBP11.11□□□□□ -0.63
PRKDC-206ENST00000536429 CENPNQ96H22 339 aaPredicted RBP11.11□□□□□ -0.63
PRKDC-206ENST00000536429 MEGF10Q96KG7 1140 aa11.11□□□□□ -0.63
PRKDC-206ENST00000536429 SIGLEC11Q96RL6 698 aa11.11□□□□□ -0.63
PRKDC-206ENST00000536429 REPIN1Q9BWE0 567 aaKnown RBP11.11□□□□□ -0.63
PRKDC-206ENST00000536429 ZNF665Q9H7R5 613 aa11.11□□□□□ -0.63
PRKDC-206ENST00000536429 TMEM106BQ9NUM4 274 aa11.11□□□□□ -0.63
PRKDC-206ENST00000536429 ZNF319Q9P2F9 582 aa11.11□□□□□ -0.63
PRKDC-206ENST00000536429 IL19Q9UHD0 177 aa11.11□□□□□ -0.63
PRKDC-206ENST00000536429 FBN1P35555 2871 aaKnown RBP11.11□□□□□ -0.63
PRKDC-206ENST00000536429 A0A1B0GWJ7 208 aa11.1□□□□□ -0.63
PRKDC-206ENST00000536429 EBAG9O00559 213 aa11.1□□□□□ -0.63
PRKDC-206ENST00000536429 IGHV2-5P01817 119 aa11.1□□□□□ -0.63
PRKDC-206ENST00000536429 LYNP07948 512 aa11.1□□□□□ -0.63
PRKDC-206ENST00000536429 PMELP40967 661 aa11.1□□□□□ -0.63
PRKDC-206ENST00000536429 MMP16P51512 607 aa11.1□□□□□ -0.63
PRKDC-206ENST00000536429 ZNF121P58317 390 aaPredicted RBP11.1□□□□□ -0.63
PRKDC-206ENST00000536429 GRB2P62993 217 aaKnown RBP11.1□□□□□ -0.63
PRKDC-206ENST00000536429 HOXA4Q00056 320 aaPredicted RBP11.1□□□□□ -0.63
PRKDC-206ENST00000536429 CR1LQ2VPA4 569 aa11.1□□□□□ -0.63
PRKDC-206ENST00000536429 CHRFAM7AQ494W8 412 aa11.1□□□□□ -0.63
PRKDC-206ENST00000536429 SLC35D3Q5M8T2 416 aa11.1□□□□□ -0.63
PRKDC-206ENST00000536429 FAM120AOSQ5T036 256 aa11.1□□□□□ -0.63
PRKDC-206ENST00000536429 FAM57BQ71RH2 274 aa11.1□□□□□ -0.63
PRKDC-206ENST00000536429 SHFQ7M4L6 423 aa11.1□□□□□ -0.63
PRKDC-206ENST00000536429 RFLNBQ8N5W9 214 aa11.1□□□□□ -0.63
PRKDC-206ENST00000536429 TCEANCQ8N8B7 351 aa11.1□□□□□ -0.63
PRKDC-206ENST00000536429 OR13G1Q8NGZ3 307 aa11.1□□□□□ -0.63
PRKDC-206ENST00000536429 THEM6Q8WUY1 208 aa11.1□□□□□ -0.63
PRKDC-206ENST00000536429 SPRYD4Q8WW59 207 aaPredicted RBP11.1□□□□□ -0.63
PRKDC-206ENST00000536429 IL4I1Q96RQ9 567 aa11.1□□□□□ -0.63
PRKDC-206ENST00000536429 TEAD3Q99594 435 aa11.1□□□□□ -0.63
PRKDC-206ENST00000536429 GCM1Q9NP62 436 aa11.1□□□□□ -0.63
PRKDC-206ENST00000536429 BRD7Q9NPI1 651 aa11.1□□□□□ -0.63
PRKDC-206ENST00000536429 TMEM100Q9NV29 134 aa11.1□□□□□ -0.63
PRKDC-206ENST00000536429 TMEM160Q9NX00 188 aa11.1□□□□□ -0.63
PRKDC-206ENST00000536429 COPS3Q9UNS2 423 aa11.1□□□□□ -0.63
PRKDC-206ENST00000536429 ISPDA4D126 451 aa11.09□□□□□ -0.63
PRKDC-206ENST00000536429 PSMD9O00233 223 aa11.09□□□□□ -0.63
PRKDC-206ENST00000536429 TBX1O43435 398 aa11.09□□□□□ -0.63
PRKDC-206ENST00000536429 ZNF205O95201 554 aa11.09□□□□□ -0.63
PRKDC-206ENST00000536429 IGHV2-70P01814 119 aa11.09□□□□□ -0.63
PRKDC-206ENST00000536429 ANXA2P07355 339 aaKnown RBP11.09□□□□□ -0.63
PRKDC-206ENST00000536429 H2BFMP0C1H6 154 aa11.09□□□□□ -0.63
PRKDC-206ENST00000536429 TNFRSF1AP19438 455 aa11.09□□□□□ -0.63
PRKDC-206ENST00000536429 ALOX5APP20292 161 aa11.09□□□□□ -0.63
PRKDC-206ENST00000536429 CA6P23280 308 aa11.09□□□□□ -0.63
PRKDC-206ENST00000536429 HSD11B1P28845 292 aa11.09□□□□□ -0.63
PRKDC-206ENST00000536429 SLC15A1P46059 708 aa11.09□□□□□ -0.63
PRKDC-206ENST00000536429 MAB21L1Q13394 359 aa11.09□□□□□ -0.63
PRKDC-206ENST00000536429 AADACL4Q5VUY2 407 aa11.09□□□□□ -0.63
PRKDC-206ENST00000536429 LRRN1Q6UXK5 716 aa11.09□□□□□ -0.63
PRKDC-206ENST00000536429 MOGAT3Q86VF5 341 aa11.09□□□□□ -0.63
PRKDC-206ENST00000536429 OR56B2PQ8NGI1 322 aa11.09□□□□□ -0.63
PRKDC-206ENST00000536429 RAB1CQ92928 201 aa11.09□□□□□ -0.63
PRKDC-206ENST00000536429 SPSB4Q96A44 273 aa11.09□□□□□ -0.63
PRKDC-206ENST00000536429 SGK3Q96BR1 496 aa11.09□□□□□ -0.63
PRKDC-206ENST00000536429 TIMD4Q96H15 378 aa11.09□□□□□ -0.63
PRKDC-206ENST00000536429 OSBPL10Q9BXB5 764 aa11.09□□□□□ -0.63
PRKDC-206ENST00000536429 TEX12Q9BXU0 123 aa11.09□□□□□ -0.63
PRKDC-206ENST00000536429 TTTY10Q9BZA0 68 aa11.09□□□□□ -0.63
PRKDC-206ENST00000536429 RIBC2Q9H4K1 309 aa11.09□□□□□ -0.63
PRKDC-206ENST00000536429 PPP1R3EQ9H7J1 279 aa11.09□□□□□ -0.63
PRKDC-206ENST00000536429 CDC42EP3Q9UKI2 254 aa11.09□□□□□ -0.63
PRKDC-206ENST00000536429 PPP1R3CQ9UQK1 317 aa11.09□□□□□ -0.63
PRKDC-206ENST00000536429 NPTNQ9Y639 398 aa11.09□□□□□ -0.63
PRKDC-206ENST00000536429 MXRA5Q9NR99 2828 aa11.08□□□□□ -0.63
PRKDC-206ENST00000536429 GGT3PA6NGU5 568 aa11.08□□□□□ -0.64
PRKDC-206ENST00000536429 B4DSR2 109 aa11.08□□□□□ -0.64
PRKDC-206ENST00000536429 TMEM178BH3BS89 294 aa11.08□□□□□ -0.64
PRKDC-206ENST00000536429 CYB5R3P00387 301 aaPredicted RBP11.08□□□□□ -0.64
PRKDC-206ENST00000536429 MSMBP08118 114 aa11.08□□□□□ -0.64
PRKDC-206ENST00000536429 SBK2P0C263 348 aa11.08□□□□□ -0.64
PRKDC-206ENST00000536429 SLC3A1Q07837 685 aa11.08□□□□□ -0.64
PRKDC-206ENST00000536429 ZMYND11Q15326 602 aa11.08□□□□□ -0.64
PRKDC-206ENST00000536429 FAM201AQ5SY85 155 aa11.08□□□□□ -0.64
PRKDC-206ENST00000536429 PRAMEF6Q5VXH4 476 aa11.08□□□□□ -0.64
PRKDC-206ENST00000536429 SLC16A9Q7RTY1 509 aa11.08□□□□□ -0.64
PRKDC-206ENST00000536429 ZNF454Q8N9F8 522 aa11.08□□□□□ -0.64
PRKDC-206ENST00000536429 TMEM163Q8TC26 289 aa11.08□□□□□ -0.64
PRKDC-206ENST00000536429 REEP6Q96HR9 211 aa11.08□□□□□ -0.64
PRKDC-206ENST00000536429 GAL3ST1Q99999 423 aa11.08□□□□□ -0.64
PRKDC-206ENST00000536429 BEX2Q9BXY8 128 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms