RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 SNCAP37840 140 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 SCAPQ12770 1279 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 ZNF345Q14585 488 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 LCN10Q6JVE6 187 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 OGFOD3Q6PK18 319 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 UNQ9370/PRO34162Q6UXP9 181 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 RFLNAQ6ZTI6 216 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 ZNF627Q7L945 461 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 OVCH1Q7RTY7 1134 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 NUP54Q7Z3B4 507 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 UBE3DQ7Z6J8 389 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 NRMQ8IXM6 262 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 HSD17B11Q8NBQ5 300 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 OR1J1Q8NGS3 322 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 OR6N1Q8NGY5 312 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 TERB2Q8NHR7 220 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 TMEM255BQ8WV15 326 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 FGF13Q92913 245 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 ZNF837Q96EG3 531 aaPredicted RBP3.33□□□□□ -1.88
MCF2-210ENST00000536274 C16orf58Q96GQ5 468 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 LINC00615Q96LM1 132 aaPredicted RBP3.33□□□□□ -1.88
MCF2-210ENST00000536274 TBX15Q96SF7 602 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 NDC1Q9BTX1 674 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 GPR62Q9BZJ7 368 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 ZNF430Q9H8G1 570 aaPredicted RBP3.33□□□□□ -1.88
MCF2-210ENST00000536274 LMAN1LQ9HAT1 526 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 PLEKHA2Q9HB19 425 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 PLEKHA1Q9HB21 404 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 SEPSECSQ9HD40 501 aaKnown RBP3.33□□□□□ -1.88
MCF2-210ENST00000536274 SLC2A8Q9NY64 477 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 CLEC1BQ9P126 229 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 USP36Q9P275 1121 aaKnown RBP3.33□□□□□ -1.88
MCF2-210ENST00000536274 KLHL13Q9P2N7 655 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 VPS29Q9UBQ0 182 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 WNT16Q9UBV4 365 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 IL19Q9UHD0 177 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 MRPS28Q9Y2Q9 187 aaKnown RBP3.33□□□□□ -1.88
MCF2-210ENST00000536274 PCYT1BQ9Y5K3 369 aaPredicted RBP3.33□□□□□ -1.88
MCF2-210ENST00000536274 FLVCR1Q9Y5Y0 555 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 TET1Q8NFU7 2136 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 NUP210Q8TEM1 1887 aaPredicted RBP3.33□□□□□ -1.88
MCF2-210ENST00000536274 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.33□□□□□ -1.88
MCF2-210ENST00000536274 XKRY2A2RUG3 117 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 XKRYO14609 159 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 CTDSPLO15194 276 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 HCRTR2O43614 444 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 PLPP2O43688 288 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 EOMESO95936 686 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 LGALS2P05162 132 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 SLC35G6P0C7Q6 338 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 SMIM10L2AP0DMW4 78 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 SMIM10L2BP0DMW5 78 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 ARAFP10398 606 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 SLC25A4P12235 298 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 ZNF7P17097 686 aaPredicted RBP3.33□□□□□ -1.88
MCF2-210ENST00000536274 AOAHP28039 575 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 PSMB6P28072 239 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 IGFALSP35858 605 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 ZNF41P51814 821 aaPredicted RBP3.33□□□□□ -1.88
MCF2-210ENST00000536274 SLC25A1P53007 311 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 TAS2R50P59544 299 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 IL13RA1P78552 427 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 MRPS6P82932 125 aaKnown RBP3.33□□□□□ -1.88
MCF2-210ENST00000536274 ACVR1Q04771 509 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 LTBQ06643 244 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 RAB32Q13637 225 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 MOGAT2Q3SYC2 334 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 VWA2Q5GFL6 755 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 LRRC73Q5JTD7 316 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 PEAR1Q5VY43 1037 aaPredicted RBP3.33□□□□□ -1.88
MCF2-210ENST00000536274 CST9LP1Q5W188 147 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 REEP3Q6NUK4 255 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 DRAM2Q6UX65 266 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 ZNF550Q7Z398 422 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 SERPINA9Q86WD7 417 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 CACUL1Q86Y37 369 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 ZNF101Q8IZC7 436 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 SELENOHQ8IZQ5 122 aaKnown RBP3.33□□□□□ -1.88
MCF2-210ENST00000536274 GABRG1Q8N1C3 465 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 LINC01555Q8NAE3 123 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 OR51A4Q8NGJ6 313 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 OR2AJ1Q8NGZ0 328 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 OR4X1Q8NH49 305 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 M1APQ8TC57 530 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 TFGQ92734 400 aaPredicted RBP3.33□□□□□ -1.88
MCF2-210ENST00000536274 RFKQ969G6 155 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 SEH1LQ96EE3 360 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 FAM210BQ96KR6 192 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 HIST1H2AAQ96QV6 131 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 ZNF607Q96SK3 696 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 UTP23Q9BRU9 249 aaKnown RBP3.33□□□□□ -1.88
MCF2-210ENST00000536274 MRPS18AQ9NVS2 196 aaKnown RBP3.33□□□□□ -1.88
MCF2-210ENST00000536274 ABRACLQ9P1F3 81 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 OARD1Q9Y530 152 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 KCNE3Q9Y6H6 103 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 DOCK4Q8N1I0 1966 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 TRAV8-7A0A075B6U6 113 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 TMEM269A0A1B0GVZ9 245 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 SHISA7A6NL88 538 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 J3QRE1 110 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms