RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 NPY4RP50391 375 aa10.98□□□□□ -0.65
RTN3-207ENST00000536011 HMGA2P52926 109 aa10.98□□□□□ -0.65
RTN3-207ENST00000536011 BLVRAP53004 296 aa10.98□□□□□ -0.65
RTN3-207ENST00000536011 TAF13Q15543 124 aa10.98□□□□□ -0.65
RTN3-207ENST00000536011 RSPO1Q2MKA7 263 aaPredicted RBP10.98□□□□□ -0.65
RTN3-207ENST00000536011 TUSC1Q2TAM9 212 aa10.98□□□□□ -0.65
RTN3-207ENST00000536011 KLF17Q5JT82 389 aaPredicted RBP10.98□□□□□ -0.65
RTN3-207ENST00000536011 RASSF6Q6ZTQ3 369 aa10.98□□□□□ -0.65
RTN3-207ENST00000536011 C9orf139Q6ZV77 190 aa10.98□□□□□ -0.65
RTN3-207ENST00000536011 ARHGAP24Q8N264 748 aa10.98□□□□□ -0.65
RTN3-207ENST00000536011 SPERTQ8NA61 448 aa10.98□□□□□ -0.65
RTN3-207ENST00000536011 UPRTQ96BW1 309 aa10.98□□□□□ -0.65
RTN3-207ENST00000536011 MAP6Q96JE9 813 aa10.98□□□□□ -0.65
RTN3-207ENST00000536011 COPS4Q9BT78 406 aa10.98□□□□□ -0.65
RTN3-207ENST00000536011 ADAT1Q9BUB4 502 aaKnown RBP10.98□□□□□ -0.65
RTN3-207ENST00000536011 MUC13Q9H3R2 512 aa10.98□□□□□ -0.65
RTN3-207ENST00000536011 EGLN3Q9H6Z9 239 aa10.98□□□□□ -0.65
RTN3-207ENST00000536011 PNRC2Q9NPJ4 139 aaKnown RBP10.98□□□□□ -0.65
RTN3-207ENST00000536011 MRPL22Q9NWU5 206 aaKnown RBP10.98□□□□□ -0.65
RTN3-207ENST00000536011 IL20Q9NYY1 176 aa10.98□□□□□ -0.65
RTN3-207ENST00000536011 MRPL15Q9P015 296 aaKnown RBP10.98□□□□□ -0.65
RTN3-207ENST00000536011 ACTR3BQ9P1U1 418 aa10.98□□□□□ -0.65
RTN3-207ENST00000536011 LYVE1Q9Y5Y7 322 aa10.98□□□□□ -0.65
RTN3-207ENST00000536011 IGHV3-64DA0A0J9YX35 117 aa10.97□□□□□ -0.65
RTN3-207ENST00000536011 GGT3PA6NGU5 568 aa10.97□□□□□ -0.65
RTN3-207ENST00000536011 CD300LBA8K4G0 201 aa10.97□□□□□ -0.65
RTN3-207ENST00000536011 BHLHE40O14503 412 aa10.97□□□□□ -0.65
RTN3-207ENST00000536011 ENSAO43768 121 aaKnown RBP10.97□□□□□ -0.65
RTN3-207ENST00000536011 FAM20BO75063 409 aa10.97□□□□□ -0.65
RTN3-207ENST00000536011 IFNGP01579 166 aa10.97□□□□□ -0.65
RTN3-207ENST00000536011 RNASE1P07998 156 aaKnown RBP10.97□□□□□ -0.65
RTN3-207ENST00000536011 FMO3P31513 532 aa10.97□□□□□ -0.65
RTN3-207ENST00000536011 PYCR1P32322 319 aa10.97□□□□□ -0.65
RTN3-207ENST00000536011 BPIFB3P59826 476 aa10.97□□□□□ -0.65
RTN3-207ENST00000536011 PAX2Q02962 417 aa10.97□□□□□ -0.65
RTN3-207ENST00000536011 CD276Q5ZPR3 534 aa10.97□□□□□ -0.65
RTN3-207ENST00000536011 SHISA2Q6UWI4 295 aa10.97□□□□□ -0.65
RTN3-207ENST00000536011 CYB561A3Q8NBI2 242 aa10.97□□□□□ -0.65
RTN3-207ENST00000536011 OR2T33Q8NG76 320 aa10.97□□□□□ -0.65
RTN3-207ENST00000536011 OR9Q2Q8NGE9 314 aa10.97□□□□□ -0.65
RTN3-207ENST00000536011 MMADHCQ9H3L0 296 aaPredicted RBP10.97□□□□□ -0.65
RTN3-207ENST00000536011 MAGIXQ9H6Y5 334 aa10.97□□□□□ -0.65
RTN3-207ENST00000536011 SP140LQ9H930 580 aa10.97□□□□□ -0.65
RTN3-207ENST00000536011 ARL8BQ9NVJ2 186 aa10.97□□□□□ -0.65
RTN3-207ENST00000536011 RNF7Q9UBF6 113 aa10.97□□□□□ -0.65
RTN3-207ENST00000536011 COMMD3-BMI1R4GMX3 469 aa10.97□□□□□ -0.65
RTN3-207ENST00000536011 TRAV40A0A0B4J280 105 aa10.96□□□□□ -0.65
RTN3-207ENST00000536011 KIR2DS1A0A191URI9 304 aa10.96□□□□□ -0.65
RTN3-207ENST00000536011 ZNF878C9JN71 531 aa10.96□□□□□ -0.65
RTN3-207ENST00000536011 NDUFA2O43678 99 aa10.96□□□□□ -0.65
RTN3-207ENST00000536011 SPARCP09486 303 aa10.96□□□□□ -0.65
RTN3-207ENST00000536011 CA6P23280 308 aa10.96□□□□□ -0.65
RTN3-207ENST00000536011 OTX1P32242 354 aaPredicted RBP10.96□□□□□ -0.65
RTN3-207ENST00000536011 MAGEA2P43356 314 aa10.96□□□□□ -0.65
RTN3-207ENST00000536011 SLC15A1P46059 708 aa10.96□□□□□ -0.65
RTN3-207ENST00000536011 ENTPD1P49961 510 aa10.96□□□□□ -0.65
RTN3-207ENST00000536011 GNGT1P63211 74 aa10.96□□□□□ -0.65
RTN3-207ENST00000536011 IL13RA1P78552 427 aa10.96□□□□□ -0.65
RTN3-207ENST00000536011 MAB21L1Q13394 359 aa10.96□□□□□ -0.65
RTN3-207ENST00000536011 CYP2R1Q6VVX0 501 aa10.96□□□□□ -0.65
RTN3-207ENST00000536011 DCXRQ7Z4W1 244 aa10.96□□□□□ -0.65
RTN3-207ENST00000536011 LNX2Q8N448 690 aa10.96□□□□□ -0.65
RTN3-207ENST00000536011 AQP11Q8NBQ7 271 aa10.96□□□□□ -0.65
RTN3-207ENST00000536011 SLC37A3Q8NCC5 494 aa10.96□□□□□ -0.65
RTN3-207ENST00000536011 TECTBQ96PL2 329 aa10.96□□□□□ -0.65
RTN3-207ENST00000536011 NUDT16L1Q9BRJ7 211 aaKnown RBP10.96□□□□□ -0.65
RTN3-207ENST00000536011 BTBD10Q9BSF8 475 aa10.96□□□□□ -0.65
RTN3-207ENST00000536011 ZNF747Q9BV97 191 aa10.96□□□□□ -0.65
RTN3-207ENST00000536011 REEP1Q9H902 201 aa10.96□□□□□ -0.65
RTN3-207ENST00000536011 UFSP2Q9NUQ7 469 aa10.96□□□□□ -0.65
RTN3-207ENST00000536011 C14orf119Q9NWQ9 140 aa10.96□□□□□ -0.65
RTN3-207ENST00000536011 ERVK-18Q9QC07 812 aa10.96□□□□□ -0.65
RTN3-207ENST00000536011 MGAM2Q2M2H8 2515 aa10.96□□□□□ -0.66
RTN3-207ENST00000536011 TRAV38-1A0A0B4J264 116 aa10.95□□□□□ -0.66
RTN3-207ENST00000536011 TVP23AA6NH52 213 aa10.95□□□□□ -0.66
RTN3-207ENST00000536011 RIIAD1A6NNX1 92 aa10.95□□□□□ -0.66
RTN3-207ENST00000536011 LGALS8O00214 317 aa10.95□□□□□ -0.66
RTN3-207ENST00000536011 XRCC2O43543 280 aa10.95□□□□□ -0.66
RTN3-207ENST00000536011 PTBP3O95758 552 aaKnown RBP10.95□□□□□ -0.66
RTN3-207ENST00000536011 PLATP00750 562 aa10.95□□□□□ -0.66
RTN3-207ENST00000536011 APOC1P02654 83 aa10.95□□□□□ -0.66
RTN3-207ENST00000536011 LIPFP07098 398 aa10.95□□□□□ -0.66
RTN3-207ENST00000536011 IGHV4-38-2P0DP08 117 aa10.95□□□□□ -0.66
RTN3-207ENST00000536011 ZNF3P17036 446 aa10.95□□□□□ -0.66
RTN3-207ENST00000536011 RBMXP38159 391 aaKnown RBP10.95□□□□□ -0.66
RTN3-207ENST00000536011 DDOSTP39656 456 aa10.95□□□□□ -0.66
RTN3-207ENST00000536011 PSMB10P40306 273 aa10.95□□□□□ -0.66
RTN3-207ENST00000536011 PMELP40967 661 aa10.95□□□□□ -0.66
RTN3-207ENST00000536011 SLC25A1P53007 311 aa10.95□□□□□ -0.66
RTN3-207ENST00000536011 GRB2P62993 217 aaKnown RBP10.95□□□□□ -0.66
RTN3-207ENST00000536011 ZNF92Q03936 586 aa10.95□□□□□ -0.66
RTN3-207ENST00000536011 GK3PQ14409 553 aa10.95□□□□□ -0.66
RTN3-207ENST00000536011 SNAI3Q3KNW1 292 aa10.95□□□□□ -0.66
RTN3-207ENST00000536011 FAM98BQ52LJ0 330 aaKnown RBP10.95□□□□□ -0.66
RTN3-207ENST00000536011 GPR157Q5UAW9 335 aa10.95□□□□□ -0.66
RTN3-207ENST00000536011 PRAMEF6Q5VXH4 476 aa10.95□□□□□ -0.66
RTN3-207ENST00000536011 WDR25Q64LD2 544 aaPredicted RBP10.95□□□□□ -0.66
RTN3-207ENST00000536011 ZNF770Q6IQ21 691 aaPredicted RBP10.95□□□□□ -0.66
RTN3-207ENST00000536011 NAA40Q86UY6 237 aa10.95□□□□□ -0.66
RTN3-207ENST00000536011 BCL6BQ8N143 479 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms