RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 CTSZQ9UBR2 303 aa10.76□□□□□ -0.69
TNFRSF1A-207ENST00000535958 ENPP4Q9Y6X5 453 aa10.76□□□□□ -0.69
TNFRSF1A-207ENST00000535958 VWFP04275 2813 aa10.76□□□□□ -0.69
TNFRSF1A-207ENST00000535958 OOEPA6NGQ2 149 aa10.75□□□□□ -0.69
TNFRSF1A-207ENST00000535958 M0R135 149 aa10.75□□□□□ -0.69
TNFRSF1A-207ENST00000535958 IMPA2O14732 288 aa10.75□□□□□ -0.69
TNFRSF1A-207ENST00000535958 GMDSO60547 372 aa10.75□□□□□ -0.69
TNFRSF1A-207ENST00000535958 PPP1R3DO95685 299 aa10.75□□□□□ -0.69
TNFRSF1A-207ENST00000535958 ECDO95905 644 aaPredicted RBP10.75□□□□□ -0.69
TNFRSF1A-207ENST00000535958 IGHV4-59P01825 116 aa10.75□□□□□ -0.69
TNFRSF1A-207ENST00000535958 ACSM4P0C7M7 580 aa10.75□□□□□ -0.69
TNFRSF1A-207ENST00000535958 ZNF26P17031 533 aaPredicted RBP10.75□□□□□ -0.69
TNFRSF1A-207ENST00000535958 SLC6A6P31641 620 aa10.75□□□□□ -0.69
TNFRSF1A-207ENST00000535958 ARF6P62330 175 aa10.75□□□□□ -0.69
TNFRSF1A-207ENST00000535958 HIST1H3AP68431 136 aa10.75□□□□□ -0.69
TNFRSF1A-207ENST00000535958 SF3A3Q12874 501 aaKnown RBP eCLIP10.75□□□□□ -0.69
TNFRSF1A-207ENST00000535958 MPPED2Q15777 294 aa10.75□□□□□ -0.69
TNFRSF1A-207ENST00000535958 HIST2H3PS2Q5TEC6 136 aa10.75□□□□□ -0.69
TNFRSF1A-207ENST00000535958 ASPHD2Q6ICH7 369 aa10.75□□□□□ -0.69
TNFRSF1A-207ENST00000535958 SMARCD3Q6STE5 483 aa10.75□□□□□ -0.69
TNFRSF1A-207ENST00000535958 HIST2H3AQ71DI3 136 aa10.75□□□□□ -0.69
TNFRSF1A-207ENST00000535958 PDZD9Q8IXQ8 264 aa10.75□□□□□ -0.69
TNFRSF1A-207ENST00000535958 SPERTQ8NA61 448 aa10.75□□□□□ -0.69
TNFRSF1A-207ENST00000535958 LINC01006Q8NI28 216 aa10.75□□□□□ -0.69
TNFRSF1A-207ENST00000535958 FAM110DQ8TAY7 271 aaPredicted RBP10.75□□□□□ -0.69
TNFRSF1A-207ENST00000535958 ST8SIA4Q92187 359 aa10.75□□□□□ -0.69
TNFRSF1A-207ENST00000535958 RCN3Q96D15 328 aa10.75□□□□□ -0.69
TNFRSF1A-207ENST00000535958 ZNF799Q96GE5 643 aa10.75□□□□□ -0.69
TNFRSF1A-207ENST00000535958 RPRD1BQ9NQG5 326 aaKnown RBP10.75□□□□□ -0.69
TNFRSF1A-207ENST00000535958 SAR1AQ9NR31 198 aa10.75□□□□□ -0.69
TNFRSF1A-207ENST00000535958 C1orf123Q9NWV4 160 aa10.75□□□□□ -0.69
TNFRSF1A-207ENST00000535958 ONECUT1Q9UBC0 465 aa10.75□□□□□ -0.69
TNFRSF1A-207ENST00000535958 B9D1Q9UPM9 204 aa10.75□□□□□ -0.69
TNFRSF1A-207ENST00000535958 NOTCH1P46531 2555 aa10.75□□□□□ -0.69
TNFRSF1A-207ENST00000535958 WNK1Q9H4A3 2382 aa10.75□□□□□ -0.69
TNFRSF1A-207ENST00000535958 PRKDCP78527 4128 aaKnown RBP10.74□□□□□ -0.69
TNFRSF1A-207ENST00000535958 A0A0U1RQK1 487 aa10.74□□□□□ -0.69
TNFRSF1A-207ENST00000535958 A0A1B0GWJ7 208 aa10.74□□□□□ -0.69
TNFRSF1A-207ENST00000535958 A0A1W2PRQ8 180 aa10.74□□□□□ -0.69
TNFRSF1A-207ENST00000535958 GMNNO75496 209 aa10.74□□□□□ -0.69
TNFRSF1A-207ENST00000535958 CLPXO76031 633 aa10.74□□□□□ -0.69
TNFRSF1A-207ENST00000535958 TXNDC12O95881 172 aa10.74□□□□□ -0.69
TNFRSF1A-207ENST00000535958 GYPAP02724 150 aa10.74□□□□□ -0.69
TNFRSF1A-207ENST00000535958 FBP1P09467 338 aa10.74□□□□□ -0.69
TNFRSF1A-207ENST00000535958 MMP9P14780 707 aa10.74□□□□□ -0.69
TNFRSF1A-207ENST00000535958 ZNF823P16415 610 aa10.74□□□□□ -0.69
TNFRSF1A-207ENST00000535958 CDKN2AP42771 156 aaKnown RBP10.74□□□□□ -0.69
TNFRSF1A-207ENST00000535958 DGCR6Q14129 220 aa10.74□□□□□ -0.69
TNFRSF1A-207ENST00000535958 SLC18B1Q6NT16 456 aa10.74□□□□□ -0.69
TNFRSF1A-207ENST00000535958 CFAP77Q6ZQR2 320 aa10.74□□□□□ -0.69
TNFRSF1A-207ENST00000535958 COLCA1Q6ZS62 124 aa10.74□□□□□ -0.69
TNFRSF1A-207ENST00000535958 BTN2A1Q7KYR7 527 aa10.74□□□□□ -0.69
TNFRSF1A-207ENST00000535958 RHOUQ7L0Q8 258 aa10.74□□□□□ -0.69
TNFRSF1A-207ENST00000535958 LDLRAD3Q86YD5 345 aa10.74□□□□□ -0.69
TNFRSF1A-207ENST00000535958 C1QL4Q86Z23 238 aa10.74□□□□□ -0.69
TNFRSF1A-207ENST00000535958 CMTM4Q8IZR5 234 aa10.74□□□□□ -0.69
TNFRSF1A-207ENST00000535958 LNX2Q8N448 690 aa10.74□□□□□ -0.69
TNFRSF1A-207ENST00000535958 PLPP7Q8NBV4 271 aa10.74□□□□□ -0.69
TNFRSF1A-207ENST00000535958 OR4C15Q8NGM1 316 aa10.74□□□□□ -0.69
TNFRSF1A-207ENST00000535958 IFT27Q9BW83 186 aa10.74□□□□□ -0.69
TNFRSF1A-207ENST00000535958 C14orf119Q9NWQ9 140 aa10.74□□□□□ -0.69
TNFRSF1A-207ENST00000535958 CMTM6Q9NX76 183 aa10.74□□□□□ -0.69
TNFRSF1A-207ENST00000535958 ARMCX1Q9P291 453 aa10.74□□□□□ -0.69
TNFRSF1A-207ENST00000535958 IGLV1-36A0A0B4J1U3 117 aa10.73□□□□□ -0.69
TNFRSF1A-207ENST00000535958 A0A1B0GVI7 797 aa10.73□□□□□ -0.69
TNFRSF1A-207ENST00000535958 ANKRD61A6NGH8 418 aa10.73□□□□□ -0.69
TNFRSF1A-207ENST00000535958 CD300LBA8K4G0 201 aa10.73□□□□□ -0.69
TNFRSF1A-207ENST00000535958 DCTN6O00399 190 aa10.73□□□□□ -0.69
TNFRSF1A-207ENST00000535958 NDUFAB1O14561 156 aa10.73□□□□□ -0.69
TNFRSF1A-207ENST00000535958 DVL1O14640 695 aa10.73□□□□□ -0.69
TNFRSF1A-207ENST00000535958 PTP4A3O75365 173 aa10.73□□□□□ -0.69
TNFRSF1A-207ENST00000535958 TSPAN15O95858 294 aa10.73□□□□□ -0.69
TNFRSF1A-207ENST00000535958 PAHP00439 452 aa10.73□□□□□ -0.69
TNFRSF1A-207ENST00000535958 GRPP07492 148 aa10.73□□□□□ -0.69
TNFRSF1A-207ENST00000535958 RHCEP18577 417 aa10.73□□□□□ -0.69
TNFRSF1A-207ENST00000535958 EEF1B2P24534 225 aaKnown RBP10.73□□□□□ -0.69
TNFRSF1A-207ENST00000535958 GRK5P34947 590 aa10.73□□□□□ -0.69
TNFRSF1A-207ENST00000535958 IER3P46695 156 aa10.73□□□□□ -0.69
TNFRSF1A-207ENST00000535958 SLC7A2P52569 658 aa10.73□□□□□ -0.69
TNFRSF1A-207ENST00000535958 C11orf91Q3C1V1 193 aa10.73□□□□□ -0.69
TNFRSF1A-207ENST00000535958 VMO1Q7Z5L0 202 aa10.73□□□□□ -0.69
TNFRSF1A-207ENST00000535958 TSEN54Q7Z6J9 526 aaKnown RBP10.73□□□□□ -0.69
TNFRSF1A-207ENST00000535958 SLC26A10Q8NG04 563 aa10.73□□□□□ -0.69
TNFRSF1A-207ENST00000535958 OR8S1Q8NH09 359 aa10.73□□□□□ -0.69
TNFRSF1A-207ENST00000535958 OR4K13Q8NH42 304 aa10.73□□□□□ -0.69
TNFRSF1A-207ENST00000535958 NMNAT3Q96T66 252 aa10.73□□□□□ -0.69
TNFRSF1A-207ENST00000535958 KCTD14Q9BQ13 255 aaPredicted RBP10.73□□□□□ -0.69
TNFRSF1A-207ENST00000535958 SIRPDQ9H106 197 aa10.73□□□□□ -0.69
TNFRSF1A-207ENST00000535958 OPA3Q9H6K4 179 aa10.73□□□□□ -0.69
TNFRSF1A-207ENST00000535958 SMURF1Q9HCE7 757 aa10.73□□□□□ -0.69
TNFRSF1A-207ENST00000535958 MRPL15Q9P015 296 aaKnown RBP10.73□□□□□ -0.69
TNFRSF1A-207ENST00000535958 KCNG2Q9UJ96 466 aa10.73□□□□□ -0.69
TNFRSF1A-207ENST00000535958 KPTNQ9Y664 436 aa10.73□□□□□ -0.69
TNFRSF1A-207ENST00000535958 BHLHE40O14503 412 aa10.72□□□□□ -0.69
TNFRSF1A-207ENST00000535958 SLC22A2O15244 555 aa10.72□□□□□ -0.69
TNFRSF1A-207ENST00000535958 OR10H3O60404 316 aa10.72□□□□□ -0.69
TNFRSF1A-207ENST00000535958 CSF1P09603 554 aa10.72□□□□□ -0.69
TNFRSF1A-207ENST00000535958 OMPP47874 163 aa10.72□□□□□ -0.69
TNFRSF1A-207ENST00000535958 PROK1P58294 105 aa10.72□□□□□ -0.69
TNFRSF1A-207ENST00000535958 KRTAP10-3P60369 221 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms