RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 KITLGP21583 273 aa10.31□□□□□ -0.76
CHD4-203ENST00000535717 DCTDP32321 178 aa10.31□□□□□ -0.76
CHD4-203ENST00000535717 RIDAP52758 137 aaKnown RBP10.31□□□□□ -0.76
CHD4-203ENST00000535717 ART1P52961 327 aa10.31□□□□□ -0.76
CHD4-203ENST00000535717 ATP5J2P56134 94 aa10.31□□□□□ -0.76
CHD4-203ENST00000535717 PRSS12P56730 875 aa10.31□□□□□ -0.76
CHD4-203ENST00000535717 PSMA6P60900 246 aaKnown RBP10.31□□□□□ -0.76
CHD4-203ENST00000535717 ACTC1P68032 377 aa10.31□□□□□ -0.76
CHD4-203ENST00000535717 ACTA1P68133 377 aa10.31□□□□□ -0.76
CHD4-203ENST00000535717 ZNF92Q03936 586 aa10.31□□□□□ -0.76
CHD4-203ENST00000535717 RAB40BQ12829 278 aa10.31□□□□□ -0.76
CHD4-203ENST00000535717 MALLQ13021 153 aa10.31□□□□□ -0.76
CHD4-203ENST00000535717 GK2Q14410 553 aaPredicted RBP10.31□□□□□ -0.76
CHD4-203ENST00000535717 NKPD1Q17RQ9 610 aa10.31□□□□□ -0.76
CHD4-203ENST00000535717 KLHL22Q53GT1 634 aa10.31□□□□□ -0.76
CHD4-203ENST00000535717 GLYATL3Q5SZD4 288 aa10.31□□□□□ -0.76
CHD4-203ENST00000535717 ZNF684Q5T5D7 378 aa10.31□□□□□ -0.76
CHD4-203ENST00000535717 FAM57BQ71RH2 274 aa10.31□□□□□ -0.76
CHD4-203ENST00000535717 THAP5Q7Z6K1 395 aa10.31□□□□□ -0.76
CHD4-203ENST00000535717 LRRC75A-AS1Q8N1F1 130 aa10.31□□□□□ -0.76
CHD4-203ENST00000535717 ACBD7Q8N6N7 88 aa10.31□□□□□ -0.76
CHD4-203ENST00000535717 OR52I1Q8NGK6 324 aa10.31□□□□□ -0.76
CHD4-203ENST00000535717 OR2AE1Q8NHA4 323 aa10.31□□□□□ -0.76
CHD4-203ENST00000535717 GTF3AQ92664 365 aaKnown RBP10.31□□□□□ -0.76
CHD4-203ENST00000535717 TRMT61AQ96FX7 289 aaKnown RBP10.31□□□□□ -0.76
CHD4-203ENST00000535717 VRK1Q99986 396 aaPredicted RBP10.31□□□□□ -0.76
CHD4-203ENST00000535717 FAM206AQ9NX38 181 aa10.31□□□□□ -0.76
CHD4-203ENST00000535717 ZNF319Q9P2F9 582 aa10.31□□□□□ -0.76
CHD4-203ENST00000535717 PURGQ9UJV8 347 aaKnown RBP10.31□□□□□ -0.76
CHD4-203ENST00000535717 FBXO9Q9UK97 447 aaPredicted RBP10.31□□□□□ -0.76
CHD4-203ENST00000535717 MYRFQ9Y2G1 1151 aa10.31□□□□□ -0.76
CHD4-203ENST00000535717 PCDHGB1Q9Y5G3 927 aa10.31□□□□□ -0.76
CHD4-203ENST00000535717 PRRC2AP48634 2157 aaKnown RBP10.31□□□□□ -0.76
CHD4-203ENST00000535717 SMIM31A0A1B0GVY4 71 aa10.3□□□□□ -0.76
CHD4-203ENST00000535717 TMEM269A0A1B0GVZ9 245 aa10.3□□□□□ -0.76
CHD4-203ENST00000535717 DAPL1A0PJW8 107 aa10.3□□□□□ -0.76
CHD4-203ENST00000535717 METTL15A6NJ78 407 aa10.3□□□□□ -0.76
CHD4-203ENST00000535717 TBX1O43435 398 aa10.3□□□□□ -0.76
CHD4-203ENST00000535717 TIMM8AO60220 97 aaPredicted RBP10.3□□□□□ -0.76
CHD4-203ENST00000535717 SRSF10O75494 262 aaKnown RBP10.3□□□□□ -0.76
CHD4-203ENST00000535717 FADS2O95864 444 aaKnown RBP10.3□□□□□ -0.76
CHD4-203ENST00000535717 IGHA1P01876 353 aa10.3□□□□□ -0.76
CHD4-203ENST00000535717 KRT8P05787 483 aa10.3□□□□□ -0.76
CHD4-203ENST00000535717 HSPA13P48723 471 aa10.3□□□□□ -0.76
CHD4-203ENST00000535717 MMP15P51511 669 aa10.3□□□□□ -0.76
CHD4-203ENST00000535717 MFGE8Q08431 387 aaPredicted RBP10.3□□□□□ -0.76
CHD4-203ENST00000535717 LSAMPQ13449 338 aa10.3□□□□□ -0.76
CHD4-203ENST00000535717 MOGQ16653 247 aa10.3□□□□□ -0.76
CHD4-203ENST00000535717 OR2T2Q6IF00 324 aa10.3□□□□□ -0.76
CHD4-203ENST00000535717 PLEKHG7Q6ZR37 379 aa10.3□□□□□ -0.76
CHD4-203ENST00000535717 YIPF7Q8N8F6 280 aa10.3□□□□□ -0.76
CHD4-203ENST00000535717 OR52H1Q8NGJ2 320 aa10.3□□□□□ -0.76
CHD4-203ENST00000535717 SNX33Q8WV41 574 aa10.3□□□□□ -0.76
CHD4-203ENST00000535717 SGK3Q96BR1 496 aa10.3□□□□□ -0.76
CHD4-203ENST00000535717 PGAM5Q96HS1 289 aa10.3□□□□□ -0.76
CHD4-203ENST00000535717 SORCS2Q96PQ0 1159 aa10.3□□□□□ -0.76
CHD4-203ENST00000535717 RHNO1Q9BSD3 238 aa10.3□□□□□ -0.76
CHD4-203ENST00000535717 REPIN1Q9BWE0 567 aaKnown RBP10.3□□□□□ -0.76
CHD4-203ENST00000535717 ANKRD60Q9BZ19 345 aa10.3□□□□□ -0.76
CHD4-203ENST00000535717 CXXC4Q9H2H0 198 aa10.3□□□□□ -0.76
CHD4-203ENST00000535717 TPK1Q9H3S4 243 aa10.3□□□□□ -0.76
CHD4-203ENST00000535717 MS4A5Q9H3V2 200 aa10.3□□□□□ -0.76
CHD4-203ENST00000535717 SP140LQ9H930 580 aa10.3□□□□□ -0.76
CHD4-203ENST00000535717 FGF20Q9NP95 211 aaPredicted RBP10.3□□□□□ -0.76
CHD4-203ENST00000535717 GPR160Q9UJ42 338 aa10.3□□□□□ -0.76
CHD4-203ENST00000535717 ZSCAN5BA6NJL1 495 aa10.29□□□□□ -0.76
CHD4-203ENST00000535717 ACOD1A6NK06 481 aa10.29□□□□□ -0.76
CHD4-203ENST00000535717 XRCC2O43543 280 aa10.29□□□□□ -0.76
CHD4-203ENST00000535717 LILRA1O75019 489 aa10.29□□□□□ -0.76
CHD4-203ENST00000535717 SULT1C4O75897 302 aa10.29□□□□□ -0.76
CHD4-203ENST00000535717 LY6HO94772 140 aa10.29□□□□□ -0.76
CHD4-203ENST00000535717 PNPP00491 289 aa10.29□□□□□ -0.76
CHD4-203ENST00000535717 MYF6P23409 242 aa10.29□□□□□ -0.76
CHD4-203ENST00000535717 MMP16P51512 607 aa10.29□□□□□ -0.76
CHD4-203ENST00000535717 TESK1Q15569 626 aa10.29□□□□□ -0.76
CHD4-203ENST00000535717 ZNF829Q3KNS6 432 aaPredicted RBP10.29□□□□□ -0.76
CHD4-203ENST00000535717 CDONQ4KMG0 1287 aa10.29□□□□□ -0.76
CHD4-203ENST00000535717 TP53I3Q53FA7 332 aa10.29□□□□□ -0.76
CHD4-203ENST00000535717 FOXB2Q5VYV0 432 aa10.29□□□□□ -0.76
CHD4-203ENST00000535717 PGAP1Q75T13 922 aa10.29□□□□□ -0.76
CHD4-203ENST00000535717 MRPL21Q7Z2W9 205 aaKnown RBP10.29□□□□□ -0.76
CHD4-203ENST00000535717 LHFPL3Q86UP9 236 aa10.29□□□□□ -0.76
CHD4-203ENST00000535717 KRTAP1-3Q8IUG1 177 aa10.29□□□□□ -0.76
CHD4-203ENST00000535717 OR5AS1Q8N127 324 aa10.29□□□□□ -0.76
CHD4-203ENST00000535717 OR8B12Q8NGG6 310 aa10.29□□□□□ -0.76
CHD4-203ENST00000535717 PPP1R14AQ96A00 147 aa10.29□□□□□ -0.76
CHD4-203ENST00000535717 SPSB4Q96A44 273 aa10.29□□□□□ -0.76
CHD4-203ENST00000535717 ZNF649Q9BS31 505 aa10.29□□□□□ -0.76
CHD4-203ENST00000535717 RAB1BQ9H0U4 201 aa10.29□□□□□ -0.76
CHD4-203ENST00000535717 OR10A2Q9H208 303 aa10.29□□□□□ -0.76
CHD4-203ENST00000535717 PLCXD1Q9NUJ7 323 aa10.29□□□□□ -0.76
CHD4-203ENST00000535717 R4GMQ9 66 aa10.29□□□□□ -0.76
CHD4-203ENST00000535717 PLSCR5A0PG75 271 aa10.28□□□□□ -0.76
CHD4-203ENST00000535717 C17orf100A8MU93 164 aa10.28□□□□□ -0.76
CHD4-203ENST00000535717 IQCF6A8MYZ5 107 aa10.28□□□□□ -0.76
CHD4-203ENST00000535717 XPNPEP2O43895 674 aa10.28□□□□□ -0.76
CHD4-203ENST00000535717 FAM20BO75063 409 aa10.28□□□□□ -0.76
CHD4-203ENST00000535717 RPP14O95059 124 aaKnown RBP10.28□□□□□ -0.76
CHD4-203ENST00000535717 F12P00748 615 aaPredicted RBP10.28□□□□□ -0.76
CHD4-203ENST00000535717 MT-ND5P03915 603 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms