RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 MYL12AP19105 171 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 BTF3P20290 206 aaKnown RBP7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 GADD45AP24522 165 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 TNFSF8P32971 234 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 KDELR2P33947 212 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 GLRXP35754 106 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 AQP2P41181 271 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 MAP2K4P45985 399 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 DAP3P51398 398 aaKnown RBP7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 ZNF84P51523 738 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 RRAS2P62070 204 aaPredicted RBP7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 RPS23P62266 143 aaKnown RBP7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 LSM3P62310 102 aaKnown RBP7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 BAK1Q16611 211 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 TIGD6Q17RP2 521 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 PODNL1Q6PEZ8 512 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 METAP1DQ6UB28 335 aaPredicted RBP7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 TMPRSS11AQ6ZMR5 421 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 CXXC5Q7LFL8 322 aaKnown RBP7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 SLC16A14Q7RTX9 510 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 ZNF584Q8IVC4 421 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 EIF4E3Q8N5X7 224 aaKnown RBP7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 ZNF540Q8NDQ6 660 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 OR4K5Q8NGD3 323 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 OR8H1Q8NGG4 311 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 OR52H1Q8NGJ2 320 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 MOSPD2Q8NHP6 518 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 UBASH3BQ8TF42 649 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 RBPMSQ93062 196 aaKnown RBP7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 YIPF5Q969M3 257 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 MCHR2Q969V1 340 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 PRRC1Q96M27 445 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 WACQ9BTA9 647 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 BEX2Q9BXY8 128 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 OR51B6Q9H340 312 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 CDH20Q9HBT6 801 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 TMEFF2Q9UIK5 374 aaPredicted RBP7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 CDC42EP3Q9UKI2 254 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 TMCC3Q9ULS5 477 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 KCNS2Q9ULS6 477 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 HSPB11Q9Y547 144 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 V9GYH0 126 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 DNHD1Q96M86 4753 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 SONP18583 2426 aaKnown RBP7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 LOC100289279A0A1B0GTE1 492 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 RPS10-NUDT3A0A1W2PQS6 291 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 LRP5LA4QPB2 252 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 LYNX1G3V0Z9 82 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 GSTA4O15217 222 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 RGS5O15539 181 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 SYNGR3O43761 229 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 GMDSO60547 372 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 SLC2A10O95528 541 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 ZNF682O95780 498 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 FADS2O95864 444 aaKnown RBP7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 CST1P01037 141 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 IGF2P01344 180 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 SERPINA5P05154 406 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 FAM157BP0CG42 384 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 FAM157CP0CG43 387 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 LYNX1P0DP58 116 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 IFI30P13284 250 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 CCL2P13500 99 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 IGFBP5P24593 272 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 LIPAP38571 399 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 ALDH3B1P43353 468 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 MAGEA2P43356 314 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 EVX1P49640 407 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 SELENOWP63302 87 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 CD83Q01151 205 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 ST3GAL3Q11203 375 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 IRF3Q14653 427 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 LAPTM4AQ15012 233 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 ALKBH6Q3KRA9 238 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 SLC36A2Q495M3 483 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 FAM166AQ6J272 317 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 RGS7BPQ6MZT1 257 aaPredicted RBP7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 PLET1Q6UQ28 207 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 IL17RELQ6ZVW7 336 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 VTCN1Q7Z7D3 282 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 LRP11Q86VZ4 500 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 MEX3DQ86XN8 651 aaKnown RBP7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 LRRC18Q8N456 261 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 PAQR4Q8N4S7 273 aaPredicted RBP7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 ARIH2OSQ8N7S6 290 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 SLC30A7Q8NEW0 376 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 ST8SIA4Q92187 359 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 NSMAFQ92636 917 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 CREB3L1Q96BA8 519 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 MSI2Q96DH6 328 aaKnown RBP7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 NEDD4LQ96PU5 975 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 MARVELD1Q9BSK0 173 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 TMEM160Q9NX00 188 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 MYEF2Q9P2K5 600 aaKnown RBP7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 RHCGQ9UBD6 479 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 LPAR3Q9UBY5 353 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 REV1Q9UBZ9 1251 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 UBQLN2Q9UHD9 624 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 SLC23A1Q9UHI7 598 aa7.34□□□□□ -1.23
SFSWAP-202ENST00000535202 PSORS1C1Q9UIG5 152 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms