RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 TRIM15Q9C019 465 aa11.5□□□□□ -0.57
CCDC84-208ENST00000534656 SLC22A4Q9H015 551 aa11.5□□□□□ -0.57
CCDC84-208ENST00000534656 SIRPDQ9H106 197 aa11.5□□□□□ -0.57
CCDC84-208ENST00000534656 KRCC1Q9NPI7 259 aaPredicted RBP11.5□□□□□ -0.57
CCDC84-208ENST00000534656 FAM32AQ9Y421 112 aaKnown RBP11.5□□□□□ -0.57
CCDC84-208ENST00000534656 DOCK11Q5JSL3 2073 aa11.49□□□□□ -0.57
CCDC84-208ENST00000534656 IGHV1-69DA0A0B4J2H0 117 aa11.49□□□□□ -0.57
CCDC84-208ENST00000534656 TRBV4-1A0A0J9YWV2 114 aa11.49□□□□□ -0.57
CCDC84-208ENST00000534656 C3orf80F5H4A9 247 aa11.49□□□□□ -0.57
CCDC84-208ENST00000534656 SLC22A2O15244 555 aa11.49□□□□□ -0.57
CCDC84-208ENST00000534656 ADAM20O43506 726 aa11.49□□□□□ -0.57
CCDC84-208ENST00000534656 GPR137BO60478 399 aa11.49□□□□□ -0.57
CCDC84-208ENST00000534656 GMDSO60547 372 aa11.49□□□□□ -0.57
CCDC84-208ENST00000534656 CLPXO76031 633 aa11.49□□□□□ -0.57
CCDC84-208ENST00000534656 PTBP3O95758 552 aaKnown RBP11.49□□□□□ -0.57
CCDC84-208ENST00000534656 RENP00797 406 aa11.49□□□□□ -0.57
CCDC84-208ENST00000534656 IGHV1-69P01742 117 aa11.49□□□□□ -0.57
CCDC84-208ENST00000534656 RHCEP18577 417 aa11.49□□□□□ -0.57
CCDC84-208ENST00000534656 GSK3BP49841 420 aa11.49□□□□□ -0.57
CCDC84-208ENST00000534656 SLC7A2P52569 658 aa11.49□□□□□ -0.57
CCDC84-208ENST00000534656 TPTEP56180 551 aa11.49□□□□□ -0.57
CCDC84-208ENST00000534656 DBPQ10586 325 aaPredicted RBP11.49□□□□□ -0.57
CCDC84-208ENST00000534656 SEC23BQ15437 767 aa11.49□□□□□ -0.57
CCDC84-208ENST00000534656 OR8B8Q15620 311 aa11.49□□□□□ -0.57
CCDC84-208ENST00000534656 TAF9Q16594 264 aa11.49□□□□□ -0.57
CCDC84-208ENST00000534656 MRPL21Q7Z2W9 205 aaKnown RBP11.49□□□□□ -0.57
CCDC84-208ENST00000534656 HDXQ7Z353 690 aa11.49□□□□□ -0.57
CCDC84-208ENST00000534656 ZBTB46Q86UZ6 589 aa11.49□□□□□ -0.57
CCDC84-208ENST00000534656 BOLLQ8N9W6 283 aaKnown RBP11.49□□□□□ -0.57
CCDC84-208ENST00000534656 PLPP7Q8NBV4 271 aa11.49□□□□□ -0.57
CCDC84-208ENST00000534656 RP9Q8TA86 221 aaKnown RBP11.49□□□□□ -0.57
CCDC84-208ENST00000534656 LHX4Q969G2 390 aa11.49□□□□□ -0.57
CCDC84-208ENST00000534656 FAM162AQ96A26 154 aa11.49□□□□□ -0.57
CCDC84-208ENST00000534656 NMNAT3Q96T66 252 aa11.49□□□□□ -0.57
CCDC84-208ENST00000534656 HOPXQ9BPY8 73 aaPredicted RBP11.49□□□□□ -0.57
CCDC84-208ENST00000534656 RASSF4Q9H2L5 321 aa11.49□□□□□ -0.57
CCDC84-208ENST00000534656 VIPAS39Q9H9C1 493 aa11.49□□□□□ -0.57
CCDC84-208ENST00000534656 SMURF1Q9HCE7 757 aa11.49□□□□□ -0.57
CCDC84-208ENST00000534656 PNRC2Q9NPJ4 139 aaKnown RBP11.49□□□□□ -0.57
CCDC84-208ENST00000534656 TRIM36Q9NQ86 728 aa11.49□□□□□ -0.57
CCDC84-208ENST00000534656 FGFR1OP2Q9NVK5 253 aa11.49□□□□□ -0.57
CCDC84-208ENST00000534656 NDUFAF4Q9P032 175 aa11.49□□□□□ -0.57
CCDC84-208ENST00000534656 ARMCX1Q9P291 453 aa11.49□□□□□ -0.57
CCDC84-208ENST00000534656 CYB5R1Q9UHQ9 305 aa11.49□□□□□ -0.57
CCDC84-208ENST00000534656 TRAV38-1A0A0B4J264 116 aa11.48□□□□□ -0.57
CCDC84-208ENST00000534656 OOEPA6NGQ2 149 aa11.48□□□□□ -0.57
CCDC84-208ENST00000534656 CD300LBA8K4G0 201 aa11.48□□□□□ -0.57
CCDC84-208ENST00000534656 ARPC3O15145 178 aa11.48□□□□□ -0.57
CCDC84-208ENST00000534656 IGHV4-59P01825 116 aa11.48□□□□□ -0.57
CCDC84-208ENST00000534656 NCK1P16333 377 aa11.48□□□□□ -0.57
CCDC84-208ENST00000534656 HIST1H1CP16403 213 aaKnown RBP11.48□□□□□ -0.57
CCDC84-208ENST00000534656 GGT2P36268 569 aa11.48□□□□□ -0.57
CCDC84-208ENST00000534656 IER3P46695 156 aa11.48□□□□□ -0.57
CCDC84-208ENST00000534656 PROK1P58294 105 aa11.48□□□□□ -0.57
CCDC84-208ENST00000534656 ARF6P62330 175 aa11.48□□□□□ -0.57
CCDC84-208ENST00000534656 RFX4Q33E94 735 aa11.48□□□□□ -0.57
CCDC84-208ENST00000534656 LDLRAD3Q86YD5 345 aa11.48□□□□□ -0.57
CCDC84-208ENST00000534656 UBE2FQ969M7 185 aa11.48□□□□□ -0.57
CCDC84-208ENST00000534656 C7orf34Q96L11 122 aa11.48□□□□□ -0.57
CCDC84-208ENST00000534656 PKP2Q99959 881 aa11.48□□□□□ -0.57
CCDC84-208ENST00000534656 FUZQ9BT04 418 aa11.48□□□□□ -0.57
CCDC84-208ENST00000534656 ADAT1Q9BUB4 502 aaKnown RBP11.48□□□□□ -0.57
CCDC84-208ENST00000534656 RPRD1BQ9NQG5 326 aaKnown RBP11.48□□□□□ -0.57
CCDC84-208ENST00000534656 A0A0U1RQK1 487 aa11.47□□□□□ -0.57
CCDC84-208ENST00000534656 M0R135 149 aa11.47□□□□□ -0.57
CCDC84-208ENST00000534656 FCN3O75636 299 aa11.47□□□□□ -0.57
CCDC84-208ENST00000534656 GYPAP02724 150 aa11.47□□□□□ -0.57
CCDC84-208ENST00000534656 COX4I1P13073 169 aa11.47□□□□□ -0.57
CCDC84-208ENST00000534656 SLC6A6P31641 620 aa11.47□□□□□ -0.57
CCDC84-208ENST00000534656 ZNF92Q03936 586 aa11.47□□□□□ -0.57
CCDC84-208ENST00000534656 C11orf91Q3C1V1 193 aa11.47□□□□□ -0.57
CCDC84-208ENST00000534656 C8orf82Q6P1X6 216 aaPredicted RBP11.47□□□□□ -0.57
CCDC84-208ENST00000534656 BTN2A1Q7KYR7 527 aa11.47□□□□□ -0.57
CCDC84-208ENST00000534656 SPERTQ8NA61 448 aa11.47□□□□□ -0.57
CCDC84-208ENST00000534656 SCCPDHQ8NBX0 429 aa11.47□□□□□ -0.57
CCDC84-208ENST00000534656 OR4K13Q8NH42 304 aa11.47□□□□□ -0.57
CCDC84-208ENST00000534656 OR52J3Q8NH60 311 aa11.47□□□□□ -0.57
CCDC84-208ENST00000534656 FANK1Q8TC84 345 aa11.47□□□□□ -0.57
CCDC84-208ENST00000534656 SPTSSAQ969W0 71 aa11.47□□□□□ -0.57
CCDC84-208ENST00000534656 ZNF799Q96GE5 643 aa11.47□□□□□ -0.57
CCDC84-208ENST00000534656 MAP6Q96JE9 813 aa11.47□□□□□ -0.57
CCDC84-208ENST00000534656 DHRS1Q96LJ7 313 aa11.47□□□□□ -0.57
CCDC84-208ENST00000534656 OR52D1Q9H346 318 aa11.47□□□□□ -0.57
CCDC84-208ENST00000534656 C1orf123Q9NWV4 160 aa11.47□□□□□ -0.57
CCDC84-208ENST00000534656 PRKDCP78527 4128 aaKnown RBP11.46□□□□□ -0.57
CCDC84-208ENST00000534656 OR6C68A6NDL8 312 aa11.46□□□□□ -0.57
CCDC84-208ENST00000534656 GGT3PA6NGU5 568 aa11.46□□□□□ -0.57
CCDC84-208ENST00000534656 SLC22A31A6NKX4 558 aa11.46□□□□□ -0.57
CCDC84-208ENST00000534656 NDUFAB1O14561 156 aa11.46□□□□□ -0.57
CCDC84-208ENST00000534656 DVL1O14640 695 aa11.46□□□□□ -0.57
CCDC84-208ENST00000534656 DIRAS1O95057 198 aa11.46□□□□□ -0.57
CCDC84-208ENST00000534656 ECDO95905 644 aaPredicted RBP11.46□□□□□ -0.57
CCDC84-208ENST00000534656 LHBP01229 141 aa11.46□□□□□ -0.57
CCDC84-208ENST00000534656 HLA-DQA2P01906 255 aa11.46□□□□□ -0.57
CCDC84-208ENST00000534656 KRT72Q14CN4 511 aa11.46□□□□□ -0.57
CCDC84-208ENST00000534656 SNAI3Q3KNW1 292 aa11.46□□□□□ -0.57
CCDC84-208ENST00000534656 FAM90A1Q86YD7 464 aa11.46□□□□□ -0.57
CCDC84-208ENST00000534656 GCSAMQ8N6F7 178 aa11.46□□□□□ -0.57
CCDC84-208ENST00000534656 ZSCAN4Q8NAM6 433 aaPredicted RBP11.46□□□□□ -0.57
CCDC84-208ENST00000534656 KCTD14Q9BQ13 255 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms