RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 MTNR1BP49286 362 aa8.32□□□□□ -1.08
CSDE1-215ENST00000533818 DYNLT3P51808 116 aa8.32□□□□□ -1.08
CSDE1-215ENST00000533818 ARMC4Q5T2S8 1044 aa8.32□□□□□ -1.08
CSDE1-215ENST00000533818 ZNF572Q7Z3I7 529 aaPredicted RBP8.32□□□□□ -1.08
CSDE1-215ENST00000533818 NANOGNBQ7Z5D8 188 aa8.32□□□□□ -1.08
CSDE1-215ENST00000533818 OR5T2Q8NGG2 359 aa8.32□□□□□ -1.08
CSDE1-215ENST00000533818 SEH1LQ96EE3 360 aa8.32□□□□□ -1.08
CSDE1-215ENST00000533818 TMEM19Q96HH6 336 aa8.32□□□□□ -1.08
CSDE1-215ENST00000533818 AKR1E2Q96JD6 320 aa8.32□□□□□ -1.08
CSDE1-215ENST00000533818 RBP7Q96R05 134 aa8.32□□□□□ -1.08
CSDE1-215ENST00000533818 PANX1Q96RD7 426 aa8.32□□□□□ -1.08
CSDE1-215ENST00000533818 CDRT15Q96T59 188 aa8.32□□□□□ -1.08
CSDE1-215ENST00000533818 WACQ9BTA9 647 aa8.32□□□□□ -1.08
CSDE1-215ENST00000533818 ST6GALNAC5Q9BVH7 336 aa8.32□□□□□ -1.08
CSDE1-215ENST00000533818 FUT8Q9BYC5 575 aa8.32□□□□□ -1.08
CSDE1-215ENST00000533818 SLC22A4Q9H015 551 aa8.32□□□□□ -1.08
CSDE1-215ENST00000533818 EMC7Q9NPA0 242 aa8.32□□□□□ -1.08
CSDE1-215ENST00000533818 SLCO1B3Q9NPD5 702 aa8.32□□□□□ -1.08
CSDE1-215ENST00000533818 SLC25A10Q9UBX3 287 aaPredicted RBP8.32□□□□□ -1.08
CSDE1-215ENST00000533818 ZNF229Q9UJW7 825 aa8.32□□□□□ -1.08
CSDE1-215ENST00000533818 SLC13A4Q9UKG4 626 aa8.32□□□□□ -1.08
CSDE1-215ENST00000533818 SH2D7A6NKC9 451 aaPredicted RBP8.31□□□□□ -1.08
CSDE1-215ENST00000533818 GMDSO60547 372 aa8.31□□□□□ -1.08
CSDE1-215ENST00000533818 KRT75O95678 551 aa8.31□□□□□ -1.08
CSDE1-215ENST00000533818 SCG5P05408 212 aa8.31□□□□□ -1.08
CSDE1-215ENST00000533818 IGHV4-30-4P0DP06 118 aa8.31□□□□□ -1.08
CSDE1-215ENST00000533818 ETS2P15036 469 aa8.31□□□□□ -1.08
CSDE1-215ENST00000533818 JUNBP17275 347 aaPredicted RBP8.31□□□□□ -1.08
CSDE1-215ENST00000533818 FSTP19883 344 aa8.31□□□□□ -1.08
CSDE1-215ENST00000533818 OR3A4PP47883 348 aa8.31□□□□□ -1.08
CSDE1-215ENST00000533818 RPL18Q07020 188 aaKnown RBP8.31□□□□□ -1.08
CSDE1-215ENST00000533818 MAD2L1Q13257 205 aaPredicted RBP8.31□□□□□ -1.08
CSDE1-215ENST00000533818 DEFB136Q30KP8 78 aa8.31□□□□□ -1.08
CSDE1-215ENST00000533818 SWT1Q5T5J6 900 aaKnown RBP8.31□□□□□ -1.08
CSDE1-215ENST00000533818 ATPAF1Q5TC12 328 aaPredicted RBP8.31□□□□□ -1.08
CSDE1-215ENST00000533818 PLBD1Q6P4A8 553 aa8.31□□□□□ -1.08
CSDE1-215ENST00000533818 FOXL2NBQ6ZUU3 175 aa8.31□□□□□ -1.08
CSDE1-215ENST00000533818 EGFL6Q8IUX8 553 aa8.31□□□□□ -1.08
CSDE1-215ENST00000533818 FAM185AQ8N0U4 392 aa8.31□□□□□ -1.08
CSDE1-215ENST00000533818 OR4Q3Q8NH05 313 aa8.31□□□□□ -1.08
CSDE1-215ENST00000533818 OR1F12Q8NHA8 337 aa8.31□□□□□ -1.08
CSDE1-215ENST00000533818 BCAS4Q8TDM0 211 aa8.31□□□□□ -1.08
CSDE1-215ENST00000533818 TCP10LQ8TDR4 215 aa8.31□□□□□ -1.08
CSDE1-215ENST00000533818 ADAT1Q9BUB4 502 aaKnown RBP8.31□□□□□ -1.08
CSDE1-215ENST00000533818 INIPQ9NRY2 104 aa8.31□□□□□ -1.08
CSDE1-215ENST00000533818 DCDC2Q9UHG0 476 aa8.31□□□□□ -1.08
CSDE1-215ENST00000533818 BTNL2Q9UIR0 455 aa8.31□□□□□ -1.08
CSDE1-215ENST00000533818 ZNF391Q9UJN7 358 aa8.31□□□□□ -1.08
CSDE1-215ENST00000533818 ANGPT4Q9Y264 503 aa8.31□□□□□ -1.08
CSDE1-215ENST00000533818 UTP11Q9Y3A2 253 aaKnown RBP8.31□□□□□ -1.08
CSDE1-215ENST00000533818 TMEM247A6NEH6 219 aa8.3□□□□□ -1.08
CSDE1-215ENST00000533818 OR6C6A6NF89 314 aa8.3□□□□□ -1.08
CSDE1-215ENST00000533818 ASAH2BP0C7U1 165 aa8.3□□□□□ -1.08
CSDE1-215ENST00000533818 GP9P14770 177 aa8.3□□□□□ -1.08
CSDE1-215ENST00000533818 SPNP16150 400 aa8.3□□□□□ -1.08
CSDE1-215ENST00000533818 CDKN2CP42773 168 aa8.3□□□□□ -1.08
CSDE1-215ENST00000533818 WDR4P57081 412 aaKnown RBP8.3□□□□□ -1.08
CSDE1-215ENST00000533818 DSTNP60981 165 aa8.3□□□□□ -1.08
CSDE1-215ENST00000533818 EMX2Q04743 252 aa8.3□□□□□ -1.08
CSDE1-215ENST00000533818 GK2Q14410 553 aaPredicted RBP8.3□□□□□ -1.08
CSDE1-215ENST00000533818 SEC23BQ15437 767 aa8.3□□□□□ -1.08
CSDE1-215ENST00000533818 SRSF7Q16629 238 aaKnown RBP eCLIP8.3□□□□□ -1.08
CSDE1-215ENST00000533818 C9orf152Q5JTZ5 239 aa8.3□□□□□ -1.08
CSDE1-215ENST00000533818 SPANXN4Q5MJ08 99 aa8.3□□□□□ -1.08
CSDE1-215ENST00000533818 LCNL1Q6ZST4 164 aa8.3□□□□□ -1.08
CSDE1-215ENST00000533818 C16orf82Q7Z2V1 217 aa8.3□□□□□ -1.08
CSDE1-215ENST00000533818 C10orf107Q8IVU9 208 aa8.3□□□□□ -1.08
CSDE1-215ENST00000533818 OR8U1Q8NH10 309 aa8.3□□□□□ -1.08
CSDE1-215ENST00000533818 AGR3Q8TD06 166 aa8.3□□□□□ -1.08
CSDE1-215ENST00000533818 LRRC29Q8WV35 223 aa8.3□□□□□ -1.08
CSDE1-215ENST00000533818 TESCQ96BS2 214 aa8.3□□□□□ -1.08
CSDE1-215ENST00000533818 C12orf43Q96C57 262 aaKnown RBP8.3□□□□□ -1.08
CSDE1-215ENST00000533818 MED30Q96HR3 178 aa8.3□□□□□ -1.08
CSDE1-215ENST00000533818 ATF6BQ99941 703 aa8.3□□□□□ -1.08
CSDE1-215ENST00000533818 POLE4Q9NR33 117 aa8.3□□□□□ -1.08
CSDE1-215ENST00000533818 TBL2Q9Y4P3 447 aaKnown RBP8.3□□□□□ -1.08
CSDE1-215ENST00000533818 FAM90A22PA8MWA6 464 aa8.29□□□□□ -1.08
CSDE1-215ENST00000533818 GOLGA6L6A8MZA4 724 aa8.29□□□□□ -1.08
CSDE1-215ENST00000533818 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.29□□□□□ -1.08
CSDE1-215ENST00000533818 KPNA4O00629 521 aaPredicted RBP8.29□□□□□ -1.08
CSDE1-215ENST00000533818 ARG1P05089 322 aa8.29□□□□□ -1.08
CSDE1-215ENST00000533818 CHRNGP07510 517 aa8.29□□□□□ -1.08
CSDE1-215ENST00000533818 PGA5P0DJD9 388 aa8.29□□□□□ -1.08
CSDE1-215ENST00000533818 CPA3P15088 417 aa8.29□□□□□ -1.08
CSDE1-215ENST00000533818 S100A3P33764 101 aa8.29□□□□□ -1.08
CSDE1-215ENST00000533818 PAFAH1B1P43034 410 aa8.29□□□□□ -1.08
CSDE1-215ENST00000533818 MVDP53602 400 aa8.29□□□□□ -1.08
CSDE1-215ENST00000533818 CAV3P56539 151 aa8.29□□□□□ -1.08
CSDE1-215ENST00000533818 OR12D2P58182 307 aa8.29□□□□□ -1.08
CSDE1-215ENST00000533818 SLC34A1Q06495 639 aa8.29□□□□□ -1.08
CSDE1-215ENST00000533818 HAGHQ16775 308 aa8.29□□□□□ -1.08
CSDE1-215ENST00000533818 DGUOKQ16854 277 aa8.29□□□□□ -1.08
CSDE1-215ENST00000533818 LDLRAD2Q5SZI1 272 aa8.29□□□□□ -1.08
CSDE1-215ENST00000533818 STUMQ69YW2 141 aa8.29□□□□□ -1.08
CSDE1-215ENST00000533818 LINC00114Q6XXX2 140 aa8.29□□□□□ -1.08
CSDE1-215ENST00000533818 DHDDSQ86SQ9 333 aa8.29□□□□□ -1.08
CSDE1-215ENST00000533818 SLCO4A1Q96BD0 722 aa8.29□□□□□ -1.08
CSDE1-215ENST00000533818 ALG12Q9BV10 488 aa8.29□□□□□ -1.08
CSDE1-215ENST00000533818 LIN7BQ9HAP6 207 aa8.29□□□□□ -1.08
CSDE1-215ENST00000533818 RNPEPL1Q9HAU8 725 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms