RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 GID4Q8IVV7 300 aa17.32■□□□□ 0.36
CCS-208ENST00000533244 OR8J1Q8NGP2 316 aa17.32■□□□□ 0.36
CCS-208ENST00000533244 OR13G1Q8NGZ3 307 aa17.32■□□□□ 0.36
CCS-208ENST00000533244 THEM6Q8WUY1 208 aa17.32■□□□□ 0.36
CCS-208ENST00000533244 HPS1Q92902 700 aa17.32■□□□□ 0.36
CCS-208ENST00000533244 HRASLS5Q96KN8 279 aa17.32■□□□□ 0.36
CCS-208ENST00000533244 C9orf16Q9BUW7 83 aa17.32■□□□□ 0.36
CCS-208ENST00000533244 OPA3Q9H6K4 179 aa17.32■□□□□ 0.36
CCS-208ENST00000533244 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.32■□□□□ 0.369e-8■■■□□ 15.1
CCS-208ENST00000533244 LRP5LA4QPB2 252 aa17.31■□□□□ 0.36
CCS-208ENST00000533244 MLNRO43193 412 aa17.31■□□□□ 0.36
CCS-208ENST00000533244 XRCC2O43543 280 aa17.31■□□□□ 0.36
CCS-208ENST00000533244 MRPL3P09001 348 aaKnown RBP17.31■□□□□ 0.36
CCS-208ENST00000533244 HCCSP53701 268 aa17.31■□□□□ 0.36
CCS-208ENST00000533244 HFEQ30201 348 aa17.31■□□□□ 0.36
CCS-208ENST00000533244 C6orf52Q5T4I8 152 aa17.31■□□□□ 0.36
CCS-208ENST00000533244 BHLHE23Q8NDY6 225 aa17.31■□□□□ 0.36
CCS-208ENST00000533244 C1orf159Q96HA4 380 aa17.31■□□□□ 0.36
CCS-208ENST00000533244 CNN2Q99439 309 aaKnown RBP17.31■□□□□ 0.36
CCS-208ENST00000533244 SP140LQ9H930 580 aa17.31■□□□□ 0.36
CCS-208ENST00000533244 ADGRL4Q9HBW9 690 aa17.31■□□□□ 0.36
CCS-208ENST00000533244 LAMP5Q9UJQ1 280 aa17.31■□□□□ 0.36
CCS-208ENST00000533244 ORC6Q9Y5N6 252 aa17.31■□□□□ 0.36
CCS-208ENST00000533244 CD300LBA8K4G0 201 aa17.3■□□□□ 0.36
CCS-208ENST00000533244 PPIHO43447 177 aaKnown RBP17.3■□□□□ 0.36
CCS-208ENST00000533244 HOXB4P17483 251 aaPredicted RBP17.3■□□□□ 0.36
CCS-208ENST00000533244 IL2RGP31785 369 aa17.3■□□□□ 0.36
CCS-208ENST00000533244 ZNF121P58317 390 aaPredicted RBP17.3■□□□□ 0.36
CCS-208ENST00000533244 ROM1Q03395 351 aa17.3■□□□□ 0.36
CCS-208ENST00000533244 CYB5R2Q6BCY4 276 aa17.3■□□□□ 0.36
CCS-208ENST00000533244 DEGS2Q6QHC5 323 aa17.3■□□□□ 0.36
CCS-208ENST00000533244 LRRN1Q6UXK5 716 aa17.3■□□□□ 0.36
CCS-208ENST00000533244 ITLN1Q8WWA0 313 aa17.3■□□□□ 0.36
CCS-208ENST00000533244 SLC29A1Q99808 456 aa17.3■□□□□ 0.36
CCS-208ENST00000533244 SOX7Q9BT81 388 aa17.3■□□□□ 0.36
CCS-208ENST00000533244 NIPAL2Q9H841 368 aa17.3■□□□□ 0.36
CCS-208ENST00000533244 H2AFY2Q9P0M6 372 aaPredicted RBP17.3■□□□□ 0.36
CCS-208ENST00000533244 COPS3Q9UNS2 423 aa17.3■□□□□ 0.36
CCS-208ENST00000533244 TMEM14AQ9Y6G1 99 aa17.3■□□□□ 0.36
CCS-208ENST00000533244 PRR32B1ATL7 298 aa17.3■□□□□ 0.36
CCS-208ENST00000533244 CLDN25C9JDP6 229 aa17.3■□□□□ 0.36
CCS-208ENST00000533244 INAFM1C9JVW0 142 aa17.3■□□□□ 0.36
CCS-208ENST00000533244 WNT9BO14905 357 aa17.3■□□□□ 0.36
CCS-208ENST00000533244 ANXA2P07355 339 aaKnown RBP17.3■□□□□ 0.36
CCS-208ENST00000533244 TNFRSF1AP19438 455 aa17.3■□□□□ 0.36
CCS-208ENST00000533244 PSMA6P60900 246 aaKnown RBP17.3■□□□□ 0.36
CCS-208ENST00000533244 CDC42P60953 191 aa17.3■□□□□ 0.36
CCS-208ENST00000533244 OR10AD1Q8NGE0 317 aa17.3■□□□□ 0.36
CCS-208ENST00000533244 OR52H1Q8NGJ2 320 aa17.3■□□□□ 0.36
CCS-208ENST00000533244 CLDND2Q8NHS1 167 aa17.3■□□□□ 0.36
CCS-208ENST00000533244 TRUB1Q8WWH5 349 aaKnown RBP17.3■□□□□ 0.36
CCS-208ENST00000533244 CCL17Q92583 94 aa17.3■□□□□ 0.36
CCS-208ENST00000533244 STMN2Q93045 179 aa17.3■□□□□ 0.36
CCS-208ENST00000533244 MSI2Q96DH6 328 aaKnown RBP17.3■□□□□ 0.36
CCS-208ENST00000533244 OR2V2Q96R30 315 aa17.3■□□□□ 0.36
CCS-208ENST00000533244 MBOAT4Q96T53 435 aa17.3■□□□□ 0.36
CCS-208ENST00000533244 MNTQ99583 582 aa17.3■□□□□ 0.36
CCS-208ENST00000533244 TMEM100Q9NV29 134 aa17.3■□□□□ 0.36
CCS-208ENST00000533244 DNAJC27Q9NZQ0 273 aa17.3■□□□□ 0.36
CCS-208ENST00000533244 ZNF319Q9P2F9 582 aa17.3■□□□□ 0.36
CCS-208ENST00000533244 LRP12Q9Y561 859 aa17.3■□□□□ 0.36
CCS-208ENST00000533244 H0YL77 283 aa17.29■□□□□ 0.36
CCS-208ENST00000533244 ZNF16P17020 682 aaPredicted RBP17.29■□□□□ 0.36
CCS-208ENST00000533244 HTR1FP30939 366 aa17.29■□□□□ 0.36
CCS-208ENST00000533244 GABPB1Q06547 395 aaPredicted RBP17.29■□□□□ 0.36
CCS-208ENST00000533244 KCTD18Q6PI47 426 aaPredicted RBP17.29■□□□□ 0.36
CCS-208ENST00000533244 FAM57BQ71RH2 274 aa17.29■□□□□ 0.36
CCS-208ENST00000533244 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.29■□□□□ 0.36
CCS-208ENST00000533244 FAM81AQ8TBF8 368 aa17.29■□□□□ 0.36
CCS-208ENST00000533244 ASB17Q8WXJ9 295 aa17.29■□□□□ 0.36
CCS-208ENST00000533244 EME1Q96AY2 570 aa17.29■□□□□ 0.36
CCS-208ENST00000533244 SGK3Q96BR1 496 aa17.29■□□□□ 0.36
CCS-208ENST00000533244 MEGF10Q96KG7 1140 aa17.29■□□□□ 0.36
CCS-208ENST00000533244 OR8B4Q96RC9 309 aa17.29■□□□□ 0.36
CCS-208ENST00000533244 WARS2Q9UGM6 360 aaKnown RBP17.29■□□□□ 0.36
CCS-208ENST00000533244 WIPI2Q9Y4P8 454 aa17.29■□□□□ 0.36
CCS-208ENST00000533244 MALRD1Q5VYJ5 2156 aa17.28■□□□□ 0.36
CCS-208ENST00000533244 hCG_38984A0A1B0GV85 526 aa17.28■□□□□ 0.36
CCS-208ENST00000533244 SBK2P0C263 348 aa17.28■□□□□ 0.36
CCS-208ENST00000533244 DCTDP32321 178 aa17.28■□□□□ 0.36
CCS-208ENST00000533244 SLC3A1Q07837 685 aa17.28■□□□□ 0.36
CCS-208ENST00000533244 ZSCAN26Q16670 478 aa17.28■□□□□ 0.36
CCS-208ENST00000533244 ZIK1Q3SY52 487 aaPredicted RBP17.28■□□□□ 0.36
CCS-208ENST00000533244 SLC25A30Q5SVS4 291 aa17.28■□□□□ 0.36
CCS-208ENST00000533244 ZBTB49Q6ZSB9 765 aa17.28■□□□□ 0.36
CCS-208ENST00000533244 KRT77Q7Z794 578 aa17.28■□□□□ 0.36
CCS-208ENST00000533244 RFLNBQ8N5W9 214 aa17.28■□□□□ 0.36
CCS-208ENST00000533244 SPRYD4Q8WW59 207 aaPredicted RBP17.28■□□□□ 0.36
CCS-208ENST00000533244 SLC22A4Q9H015 551 aa17.28■□□□□ 0.36
CCS-208ENST00000533244 DCAF16Q9NXF7 216 aa17.28■□□□□ 0.36
CCS-208ENST00000533244 TREM2Q9NZC2 230 aa17.28■□□□□ 0.36
CCS-208ENST00000533244 MRPL15Q9P015 296 aaKnown RBP17.28■□□□□ 0.36
CCS-208ENST00000533244 N6AMT1Q9Y5N5 214 aa17.28■□□□□ 0.36
CCS-208ENST00000533244 DYSFO75923 2080 aa17.27■□□□□ 0.36
CCS-208ENST00000533244 TBX1O43435 398 aa17.27■□□□□ 0.35
CCS-208ENST00000533244 ZNF254O75437 659 aa17.27■□□□□ 0.35
CCS-208ENST00000533244 BAG2O95816 211 aa17.27■□□□□ 0.35
CCS-208ENST00000533244 HLA-DPB1P04440 258 aa17.27■□□□□ 0.35
CCS-208ENST00000533244 DDOSTP39656 456 aa17.27■□□□□ 0.35
CCS-208ENST00000533244 LMO4P61968 165 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms