RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 LBX1P52954 281 aa7.42□□□□□ -1.22
CTNND1-231ENST00000532463 SNRPGP62308 76 aaKnown RBP7.42□□□□□ -1.22
CTNND1-231ENST00000532463 RELBQ01201 579 aa7.42□□□□□ -1.22
CTNND1-231ENST00000532463 NOGQ13253 232 aa7.42□□□□□ -1.22
CTNND1-231ENST00000532463 KIR2DS3Q14952 304 aa7.42□□□□□ -1.22
CTNND1-231ENST00000532463 ZNF260Q3ZCT1 412 aa7.42□□□□□ -1.22
CTNND1-231ENST00000532463 SMUG1Q53HV7 270 aa7.42□□□□□ -1.22
CTNND1-231ENST00000532463 SPRED1Q7Z699 444 aa7.42□□□□□ -1.22
CTNND1-231ENST00000532463 WDR83Q9BRX9 315 aaKnown RBP7.42□□□□□ -1.22
CTNND1-231ENST00000532463 P2RY12Q9H244 342 aa7.42□□□□□ -1.22
CTNND1-231ENST00000532463 CGGBP1Q9UFW8 167 aaPredicted RBP7.42□□□□□ -1.22
CTNND1-231ENST00000532463 NAT8Q9UHE5 227 aa7.42□□□□□ -1.22
CTNND1-231ENST00000532463 SLC23A1Q9UHI7 598 aa7.42□□□□□ -1.22
CTNND1-231ENST00000532463 A0A0D9SEW6 157 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 SOD1P00441 154 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 NMUP48645 174 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 FOXK2Q01167 660 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 CDC20Q12834 499 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 LEXMQ3ZCV2 418 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 MRPL2Q5T653 305 aaKnown RBP7.41□□□□□ -1.22
CTNND1-231ENST00000532463 YOD1Q5VVQ6 348 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-231ENST00000532463 BEND2Q8NDZ0 799 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 OR8A1Q8NGG7 326 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 SLC35A4Q96G79 324 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 TNFRSF13CQ96RJ3 184 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 RSRP1Q9BUV0 290 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 MEIKINA0A087WXM9 373 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 TRBV4-1A0A0J9YWV2 114 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 PEX10O60683 326 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 DNAL4O96015 105 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 RABIFP47224 123 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 C19orf54Q5BKX5 351 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 LINC00346Q8IVM7 164 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 C11orf40Q8WZ69 217 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 WDR89Q96FK6 387 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-231ENST00000532463 TMEM56Q96MV1 263 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 OR5M11Q96RB7 305 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 TMEM140Q9NV12 185 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 TMX2-CTNND1H3BSU7 103 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 AKR7A2O43488 359 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 CTSAP10619 480 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 ARRB2P32121 409 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 CCR2P41597 374 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 INHBCP55103 352 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 C21orf58P58505 322 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 GNB2P62879 340 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 HOXA4Q00056 320 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-231ENST00000532463 SSBP1Q04837 148 aaKnown RBP7.41□□□□□ -1.22
CTNND1-231ENST00000532463 TMEM81Q6P7N7 255 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 CALHM1Q8IU99 346 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 UMODL1-AS1Q8N2C9 162 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 LINC00469Q8N7U9 141 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 TSACCQ96A04 125 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-231ENST00000532463 NEIL1Q96FI4 390 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-231ENST00000532463 ANGPTL4Q9BY76 406 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 TINAGL1Q9GZM7 467 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-231ENST00000532463 CLEC5AQ9NY25 188 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 POMT2Q9UKY4 750 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 MAP2P11137 1827 aaKnown RBP7.41□□□□□ -1.22
CTNND1-231ENST00000532463 A0A0A6YYC8 382 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-231ENST00000532463 I3L1I5 382 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-231ENST00000532463 SLC17A3O00476 420 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 XRCC2O43543 280 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 DOK2O60496 412 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 HAPLN1P10915 354 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-231ENST00000532463 CD96P40200 585 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 ERVS71-1P61550 626 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 JAG1P78504 1218 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 RTP4Q96DX8 246 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 ACER3Q9NUN7 267 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 IGLON5A6NGN9 336 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 B4DEV8 164 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 DIRC3C9JPN6 131 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 ZNF737O75373 536 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 DGCR2P98153 550 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 NR0B2Q15466 257 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 NPY5RQ15761 445 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 BSXQ3C1V8 233 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 VMA21Q3ZAQ7 101 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 OR5M10Q6IEU7 315 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 OR51F2Q8NH61 342 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 ZNF502Q8TBZ5 544 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 VN1R17PQ8TDU5 208 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 DTD2Q96FN9 168 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 LRRC3BQ96PB8 259 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 GABARAPL3Q9BY60 117 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 PRSS16Q9NQE7 514 aa7.41□□□□□ -1.22
CTNND1-231ENST00000532463 OR2A25A4D2G3 310 aa7.4□□□□□ -1.22
CTNND1-231ENST00000532463 RBP4P02753 201 aa7.4□□□□□ -1.22
CTNND1-231ENST00000532463 CPMP14384 443 aa7.4□□□□□ -1.22
CTNND1-231ENST00000532463 DAPP51397 102 aa7.4□□□□□ -1.22
CTNND1-231ENST00000532463 EXOSC7Q15024 291 aaKnown RBP7.4□□□□□ -1.22
CTNND1-231ENST00000532463 C11orf87Q6NUJ2 197 aa7.4□□□□□ -1.22
CTNND1-231ENST00000532463 LHFPL2Q6ZUX7 228 aa7.4□□□□□ -1.22
CTNND1-231ENST00000532463 PLPP6Q8IY26 295 aa7.4□□□□□ -1.22
CTNND1-231ENST00000532463 ARL6IP6Q8N6S5 226 aa7.4□□□□□ -1.22
CTNND1-231ENST00000532463 FBXO27Q8NI29 283 aa7.4□□□□□ -1.22
CTNND1-231ENST00000532463 VCX2Q9H322 139 aa7.4□□□□□ -1.22
CTNND1-231ENST00000532463 KAT6AQ92794 2004 aa7.4□□□□□ -1.22
CTNND1-231ENST00000532463 TMPRSS11DO60235 418 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms