RNA–Protein interactions for RNA: ENST00000532409.5

CTSB-225, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-225ENST00000532409 MMP16P51512 607 aa13.08□□□□□ -0.32
CTSB-225ENST00000532409 BLVRAP53004 296 aa13.08□□□□□ -0.32
CTSB-225ENST00000532409 HCCSP53701 268 aa13.08□□□□□ -0.32
CTSB-225ENST00000532409 DVL1P1P54792 670 aaPredicted RBP13.08□□□□□ -0.32
CTSB-225ENST00000532409 HOXA4Q00056 320 aaPredicted RBP13.08□□□□□ -0.32
CTSB-225ENST00000532409 MALLQ13021 153 aa13.08□□□□□ -0.32
CTSB-225ENST00000532409 DRAM2Q6UX65 266 aa13.08□□□□□ -0.32
CTSB-225ENST00000532409 PGAP1Q75T13 922 aa13.08□□□□□ -0.32
CTSB-225ENST00000532409 BCDIN3DQ7Z5W3 292 aaKnown RBP13.08□□□□□ -0.32
CTSB-225ENST00000532409 TMEM186Q96B77 213 aa13.08□□□□□ -0.32
CTSB-225ENST00000532409 DUS3LQ96G46 650 aaKnown RBP13.08□□□□□ -0.32
CTSB-225ENST00000532409 TIMD4Q96H15 378 aa13.08□□□□□ -0.32
CTSB-225ENST00000532409 GAL3ST1Q99999 423 aa13.08□□□□□ -0.32
CTSB-225ENST00000532409 GCM1Q9NP62 436 aa13.08□□□□□ -0.32
CTSB-225ENST00000532409 HIF1ANQ9NWT6 349 aa13.08□□□□□ -0.32
CTSB-225ENST00000532409 UBAP1Q9NZ09 502 aa13.08□□□□□ -0.32
CTSB-225ENST00000532409 DNAJC27Q9NZQ0 273 aa13.08□□□□□ -0.32
CTSB-225ENST00000532409 IL19Q9UHD0 177 aa13.08□□□□□ -0.32
CTSB-225ENST00000532409 TMEFF2Q9UIK5 374 aaPredicted RBP13.08□□□□□ -0.32
CTSB-225ENST00000532409 PPP1R3CQ9UQK1 317 aa13.08□□□□□ -0.32
CTSB-225ENST00000532409 CCDC182A6NF36 153 aa13.07□□□□□ -0.32
CTSB-225ENST00000532409 CD300LBA8K4G0 201 aa13.07□□□□□ -0.32
CTSB-225ENST00000532409 G3V2T6 193 aa13.07□□□□□ -0.32
CTSB-225ENST00000532409 PRKYO43930 277 aa13.07□□□□□ -0.32
CTSB-225ENST00000532409 CIB2O75838 187 aa13.07□□□□□ -0.32
CTSB-225ENST00000532409 IGHV2-70P01814 119 aa13.07□□□□□ -0.32
CTSB-225ENST00000532409 SBK2P0C263 348 aa13.07□□□□□ -0.32
CTSB-225ENST00000532409 SRD5A1P18405 259 aa13.07□□□□□ -0.32
CTSB-225ENST00000532409 TNFRSF1AP19438 455 aa13.07□□□□□ -0.32
CTSB-225ENST00000532409 FASP25445 335 aa13.07□□□□□ -0.32
CTSB-225ENST00000532409 PMELP40967 661 aa13.07□□□□□ -0.32
CTSB-225ENST00000532409 RPS7P62081 194 aaKnown RBP13.07□□□□□ -0.32
CTSB-225ENST00000532409 SRSF2Q01130 221 aaKnown RBP13.07□□□□□ -0.32
CTSB-225ENST00000532409 APOFQ13790 326 aa13.07□□□□□ -0.32
CTSB-225ENST00000532409 PTGES3Q15185 160 aaKnown RBP13.07□□□□□ -0.32
CTSB-225ENST00000532409 ZMYND11Q15326 602 aa13.07□□□□□ -0.32
CTSB-225ENST00000532409 SNAPC1Q16533 368 aa13.07□□□□□ -0.32
CTSB-225ENST00000532409 CXXC5Q7LFL8 322 aaKnown RBP13.07□□□□□ -0.32
CTSB-225ENST00000532409 MOGAT3Q86VF5 341 aa13.07□□□□□ -0.32
CTSB-225ENST00000532409 PARP8Q8N3A8 854 aa13.07□□□□□ -0.32
CTSB-225ENST00000532409 RNF133Q8WVZ7 376 aa13.07□□□□□ -0.32
CTSB-225ENST00000532409 SPRYD4Q8WW59 207 aaPredicted RBP13.07□□□□□ -0.32
CTSB-225ENST00000532409 PYDC1Q8WXC3 89 aa13.07□□□□□ -0.32
CTSB-225ENST00000532409 PLEKHA8Q96JA3 519 aa13.07□□□□□ -0.32
CTSB-225ENST00000532409 KRT84Q9NSB2 600 aa13.07□□□□□ -0.32
CTSB-225ENST00000532409 TMEM100Q9NV29 134 aa13.07□□□□□ -0.32
CTSB-225ENST00000532409 ZNF319Q9P2F9 582 aa13.07□□□□□ -0.32
CTSB-225ENST00000532409 LPAR3Q9UBY5 353 aa13.07□□□□□ -0.32
CTSB-225ENST00000532409 NPTNQ9Y639 398 aa13.07□□□□□ -0.32
CTSB-225ENST00000532409 A0A1B0GWJ7 208 aa13.06□□□□□ -0.32
CTSB-225ENST00000532409 TBX1O43435 398 aa13.06□□□□□ -0.32
CTSB-225ENST00000532409 PLPP2O43688 288 aa13.06□□□□□ -0.32
CTSB-225ENST00000532409 CYB5R3P00387 301 aaPredicted RBP13.06□□□□□ -0.32
CTSB-225ENST00000532409 ANXA2P07355 339 aaKnown RBP13.06□□□□□ -0.32
CTSB-225ENST00000532409 MRPL3P09001 348 aaKnown RBP13.06□□□□□ -0.32
CTSB-225ENST00000532409 CA6P23280 308 aa13.06□□□□□ -0.32
CTSB-225ENST00000532409 OPRL1P41146 370 aa13.06□□□□□ -0.32
CTSB-225ENST00000532409 ZNF121P58317 390 aaPredicted RBP13.06□□□□□ -0.32
CTSB-225ENST00000532409 SLC3A1Q07837 685 aa13.06□□□□□ -0.32
CTSB-225ENST00000532409 MAB21L1Q13394 359 aa13.06□□□□□ -0.32
CTSB-225ENST00000532409 FAM201AQ5SY85 155 aa13.06□□□□□ -0.32
CTSB-225ENST00000532409 PRAMEF6Q5VXH4 476 aa13.06□□□□□ -0.32
CTSB-225ENST00000532409 PRSS45Q7RTY3 260 aa13.06□□□□□ -0.32
CTSB-225ENST00000532409 GLCCI1Q86VQ1 547 aa13.06□□□□□ -0.32
CTSB-225ENST00000532409 OR51F2Q8NH61 342 aa13.06□□□□□ -0.32
CTSB-225ENST00000532409 DNAJC9Q8WXX5 260 aa13.06□□□□□ -0.32
CTSB-225ENST00000532409 REPIN1Q9BWE0 567 aaKnown RBP13.06□□□□□ -0.32
CTSB-225ENST00000532409 BRD7Q9NPI1 651 aa13.06□□□□□ -0.32
CTSB-225ENST00000532409 GGT3PA6NGU5 568 aa13.05□□□□□ -0.32
CTSB-225ENST00000532409 SAC3D1A6NKF1 404 aa13.05□□□□□ -0.32
CTSB-225ENST00000532409 PRR32B1ATL7 298 aa13.05□□□□□ -0.32
CTSB-225ENST00000532409 TMEM178BH3BS89 294 aa13.05□□□□□ -0.32
CTSB-225ENST00000532409 PRODHO43272 600 aa13.05□□□□□ -0.32
CTSB-225ENST00000532409 HSD11B1P28845 292 aa13.05□□□□□ -0.32
CTSB-225ENST00000532409 POLR2IP36954 125 aaKnown RBP13.05□□□□□ -0.32
CTSB-225ENST00000532409 SEC61A1P61619 476 aaKnown RBP13.05□□□□□ -0.32
CTSB-225ENST00000532409 BTG1P62324 171 aa13.05□□□□□ -0.32
CTSB-225ENST00000532409 GRB2P62993 217 aaKnown RBP13.05□□□□□ -0.32
CTSB-225ENST00000532409 KPNB1Q14974 876 aaKnown RBP13.05□□□□□ -0.32
CTSB-225ENST00000532409 MPPED2Q15777 294 aa13.05□□□□□ -0.32
CTSB-225ENST00000532409 GFOD2Q3B7J2 385 aa13.05□□□□□ -0.32
CTSB-225ENST00000532409 KDM4DQ6B0I6 523 aa13.05□□□□□ -0.32
CTSB-225ENST00000532409 LRRN1Q6UXK5 716 aa13.05□□□□□ -0.32
CTSB-225ENST00000532409 CCDC121Q6ZUS5 278 aa13.05□□□□□ -0.32
CTSB-225ENST00000532409 FAM57BQ71RH2 274 aa13.05□□□□□ -0.32
CTSB-225ENST00000532409 PEG10Q86TG7 708 aaKnown RBP13.05□□□□□ -0.32
CTSB-225ENST00000532409 ZDHHC13Q8IUH4 622 aa13.05□□□□□ -0.32
CTSB-225ENST00000532409 OR56B2PQ8NGI1 322 aa13.05□□□□□ -0.32
CTSB-225ENST00000532409 OTOSQ8NHW6 89 aa13.05□□□□□ -0.32
CTSB-225ENST00000532409 THEM6Q8WUY1 208 aa13.05□□□□□ -0.32
CTSB-225ENST00000532409 SGK3Q96BR1 496 aa13.05□□□□□ -0.32
CTSB-225ENST00000532409 RAB39BQ96DA2 213 aa13.05□□□□□ -0.32
CTSB-225ENST00000532409 CIB1Q99828 191 aa13.05□□□□□ -0.32
CTSB-225ENST00000532409 TTTY10Q9BZA0 68 aa13.05□□□□□ -0.32
CTSB-225ENST00000532409 GABARAPL1Q9H0R8 117 aa13.05□□□□□ -0.32
CTSB-225ENST00000532409 PPP1R3EQ9H7J1 279 aa13.05□□□□□ -0.32
CTSB-225ENST00000532409 OAZ3Q9UMX2 235 aa13.05□□□□□ -0.32
CTSB-225ENST00000532409 ERICH4A6NGS2 130 aa13.04□□□□□ -0.32
CTSB-225ENST00000532409 PSMD9O00233 223 aa13.04□□□□□ -0.32
CTSB-225ENST00000532409 AVPP01185 164 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms