RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 SPATA46Q5T0L3 261 aa12.37□□□□□ -0.43
CPSF1-206ENST00000531480 ZNF322Q6U7Q0 402 aaPredicted RBP12.37□□□□□ -0.43
CPSF1-206ENST00000531480 PRSS57Q6UWY2 283 aa12.37□□□□□ -0.43
CPSF1-206ENST00000531480 SPATC1Q76KD6 591 aa12.37□□□□□ -0.43
CPSF1-206ENST00000531480 ZNF540Q8NDQ6 660 aa12.37□□□□□ -0.43
CPSF1-206ENST00000531480 BPIFB6Q8NFQ5 453 aa12.37□□□□□ -0.43
CPSF1-206ENST00000531480 CNIH3Q8TBE1 160 aa12.37□□□□□ -0.43
CPSF1-206ENST00000531480 SYT3Q9BQG1 590 aa12.37□□□□□ -0.43
CPSF1-206ENST00000531480 REPIN1Q9BWE0 567 aaKnown RBP12.37□□□□□ -0.43
CPSF1-206ENST00000531480 MROQ9BYG7 248 aa12.37□□□□□ -0.43
CPSF1-206ENST00000531480 FAM206AQ9NX38 181 aa12.37□□□□□ -0.43
CPSF1-206ENST00000531480 UBAP1Q9NZ09 502 aa12.37□□□□□ -0.43
CPSF1-206ENST00000531480 NDUFA13Q9P0J0 144 aa12.37□□□□□ -0.43
CPSF1-206ENST00000531480 CGGBP1Q9UFW8 167 aaPredicted RBP12.37□□□□□ -0.43
CPSF1-206ENST00000531480 MRM2Q9UI43 246 aaKnown RBP12.37□□□□□ -0.43
CPSF1-206ENST00000531480 FZR1Q9UM11 496 aa12.37□□□□□ -0.43
CPSF1-206ENST00000531480 CELSR1Q9NYQ6 3014 aa12.36□□□□□ -0.43
CPSF1-206ENST00000531480 C5orf63A6NC05 138 aa12.36□□□□□ -0.43
CPSF1-206ENST00000531480 M0R233 179 aa12.36□□□□□ -0.43
CPSF1-206ENST00000531480 SULT1C4O75897 302 aa12.36□□□□□ -0.43
CPSF1-206ENST00000531480 APOL3O95236 402 aa12.36□□□□□ -0.43
CPSF1-206ENST00000531480 IGHV4-39P01824 125 aa12.36□□□□□ -0.43
CPSF1-206ENST00000531480 LCATP04180 440 aa12.36□□□□□ -0.43
CPSF1-206ENST00000531480 HSD11B1P28845 292 aa12.36□□□□□ -0.43
CPSF1-206ENST00000531480 GCH1P30793 250 aa12.36□□□□□ -0.43
CPSF1-206ENST00000531480 LIPAP38571 399 aa12.36□□□□□ -0.43
CPSF1-206ENST00000531480 ZNF121P58317 390 aaPredicted RBP12.36□□□□□ -0.43
CPSF1-206ENST00000531480 ACTC1P68032 377 aa12.36□□□□□ -0.43
CPSF1-206ENST00000531480 ACTA1P68133 377 aa12.36□□□□□ -0.43
CPSF1-206ENST00000531480 ZNF85Q03923 595 aa12.36□□□□□ -0.43
CPSF1-206ENST00000531480 GK2Q14410 553 aaPredicted RBP12.36□□□□□ -0.43
CPSF1-206ENST00000531480 DNM1P46Q6ZS02 220 aa12.36□□□□□ -0.43
CPSF1-206ENST00000531480 KRT77Q7Z794 578 aa12.36□□□□□ -0.43
CPSF1-206ENST00000531480 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.36□□□□□ -0.43
CPSF1-206ENST00000531480 STX19Q8N4C7 294 aa12.36□□□□□ -0.43
CPSF1-206ENST00000531480 ZNF283Q8N7M2 679 aa12.36□□□□□ -0.43
CPSF1-206ENST00000531480 OR52H1Q8NGJ2 320 aa12.36□□□□□ -0.43
CPSF1-206ENST00000531480 TRMT61AQ96FX7 289 aaKnown RBP12.36□□□□□ -0.43
CPSF1-206ENST00000531480 MS4A5Q9H3V2 200 aa12.36□□□□□ -0.43
CPSF1-206ENST00000531480 OPA3Q9H6K4 179 aa12.36□□□□□ -0.43
CPSF1-206ENST00000531480 SP140LQ9H930 580 aa12.36□□□□□ -0.43
CPSF1-206ENST00000531480 FGF20Q9NP95 211 aaPredicted RBP12.36□□□□□ -0.43
CPSF1-206ENST00000531480 ZNF319Q9P2F9 582 aa12.36□□□□□ -0.43
CPSF1-206ENST00000531480 DUSP13Q9UII6 198 aa12.36□□□□□ -0.43
CPSF1-206ENST00000531480 GPR160Q9UJ42 338 aa12.36□□□□□ -0.43
CPSF1-206ENST00000531480 PURGQ9UJV8 347 aaKnown RBP12.36□□□□□ -0.43
CPSF1-206ENST00000531480 ITPR3Q14573 2671 aa12.35□□□□□ -0.43
CPSF1-206ENST00000531480 SLC1A7O00341 560 aa12.35□□□□□ -0.43
CPSF1-206ENST00000531480 XRCC2O43543 280 aa12.35□□□□□ -0.43
CPSF1-206ENST00000531480 RGS10O43665 173 aa12.35□□□□□ -0.43
CPSF1-206ENST00000531480 FADS2O95864 444 aaKnown RBP12.35□□□□□ -0.43
CPSF1-206ENST00000531480 IGLV3-1P01715 115 aa12.35□□□□□ -0.43
CPSF1-206ENST00000531480 PIPP12273 146 aaPredicted RBP12.35□□□□□ -0.43
CPSF1-206ENST00000531480 CRHBPP24387 322 aa12.35□□□□□ -0.43
CPSF1-206ENST00000531480 SLC6A9P48067 706 aa12.35□□□□□ -0.43
CPSF1-206ENST00000531480 MVKQ03426 396 aa12.35□□□□□ -0.43
CPSF1-206ENST00000531480 HLXQ14774 488 aaPredicted RBP12.35□□□□□ -0.43
CPSF1-206ENST00000531480 ALKBH6Q3KRA9 238 aa12.35□□□□□ -0.43
CPSF1-206ENST00000531480 CDONQ4KMG0 1287 aa12.35□□□□□ -0.43
CPSF1-206ENST00000531480 ACBD7Q8N6N7 88 aa12.35□□□□□ -0.43
CPSF1-206ENST00000531480 OR10H4Q8NGA5 316 aa12.35□□□□□ -0.43
CPSF1-206ENST00000531480 FCGR1BQ92637 280 aa12.35□□□□□ -0.43
CPSF1-206ENST00000531480 ITFG2Q969R8 447 aa12.35□□□□□ -0.43
CPSF1-206ENST00000531480 RNF166Q96A37 237 aaPredicted RBP12.35□□□□□ -0.43
CPSF1-206ENST00000531480 CMBLQ96DG6 245 aa12.35□□□□□ -0.43
CPSF1-206ENST00000531480 SORCS2Q96PQ0 1159 aa12.35□□□□□ -0.43
CPSF1-206ENST00000531480 RGCCQ9H4X1 137 aa12.35□□□□□ -0.43
CPSF1-206ENST00000531480 AMBNQ9NP70 447 aa12.35□□□□□ -0.43
CPSF1-206ENST00000531480 INPP5EQ9NRR6 644 aa12.35□□□□□ -0.43
CPSF1-206ENST00000531480 CYSLTR2Q9NS75 346 aa12.35□□□□□ -0.43
CPSF1-206ENST00000531480 NKIRAS2Q9NYR9 191 aa12.35□□□□□ -0.43
CPSF1-206ENST00000531480 TAAR3PQ9P1P4 343 aa12.35□□□□□ -0.43
CPSF1-206ENST00000531480 ZNF391Q9UJN7 358 aa12.35□□□□□ -0.43
CPSF1-206ENST00000531480 MED13LQ71F56 2210 aa12.34□□□□□ -0.43
CPSF1-206ENST00000531480 C17orf100A8MU93 164 aa12.34□□□□□ -0.43
CPSF1-206ENST00000531480 IQCF6A8MYZ5 107 aa12.34□□□□□ -0.43
CPSF1-206ENST00000531480 PTGES3LE9PB15 166 aa12.34□□□□□ -0.43
CPSF1-206ENST00000531480 NDUFS7O75251 213 aa12.34□□□□□ -0.43
CPSF1-206ENST00000531480 PNPP00491 289 aa12.34□□□□□ -0.43
CPSF1-206ENST00000531480 F12P00748 615 aaPredicted RBP12.34□□□□□ -0.43
CPSF1-206ENST00000531480 ADRA2AP08913 450 aa12.34□□□□□ -0.43
CPSF1-206ENST00000531480 SLC2A1P11166 492 aa12.34□□□□□ -0.43
CPSF1-206ENST00000531480 MYL12AP19105 171 aa12.34□□□□□ -0.43
CPSF1-206ENST00000531480 ALDH3B1P43353 468 aa12.34□□□□□ -0.43
CPSF1-206ENST00000531480 RIDAP52758 137 aaKnown RBP12.34□□□□□ -0.43
CPSF1-206ENST00000531480 EFNA4P52798 201 aa12.34□□□□□ -0.43
CPSF1-206ENST00000531480 ART1P52961 327 aa12.34□□□□□ -0.43
CPSF1-206ENST00000531480 ZNF92Q03936 586 aa12.34□□□□□ -0.43
CPSF1-206ENST00000531480 MALLQ13021 153 aa12.34□□□□□ -0.43
CPSF1-206ENST00000531480 GLYATL3Q5SZD4 288 aa12.34□□□□□ -0.43
CPSF1-206ENST00000531480 ZNF773Q6PK81 442 aa12.34□□□□□ -0.43
CPSF1-206ENST00000531480 SPNS3Q6ZMD2 512 aa12.34□□□□□ -0.43
CPSF1-206ENST00000531480 KRT74Q7RTS7 529 aa12.34□□□□□ -0.43
CPSF1-206ENST00000531480 KCTD20Q7Z5Y7 419 aa12.34□□□□□ -0.43
CPSF1-206ENST00000531480 OR52I1Q8NGK6 324 aa12.34□□□□□ -0.43
CPSF1-206ENST00000531480 SGK3Q96BR1 496 aa12.34□□□□□ -0.43
CPSF1-206ENST00000531480 BARX1Q9HBU1 254 aaPredicted RBP12.34□□□□□ -0.43
CPSF1-206ENST00000531480 G6PC2Q9NQR9 355 aa12.34□□□□□ -0.43
CPSF1-206ENST00000531480 FKBP14Q9NWM8 211 aa12.34□□□□□ -0.43
CPSF1-206ENST00000531480 PTTG3PQ9NZH4 202 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms