RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 ZNF799Q96GE5 643 aa13.16□□□□□ -0.3
CHMP4A-204ENST00000530996 EFCAB1Q9HAE3 211 aa13.16□□□□□ -0.3
CHMP4A-204ENST00000530996 NOX4Q9NPH5 578 aa13.16□□□□□ -0.3
CHMP4A-204ENST00000530996 RNF7Q9UBF6 113 aa13.16□□□□□ -0.3
CHMP4A-204ENST00000530996 MMP24Q9Y5R2 645 aa13.16□□□□□ -0.3
CHMP4A-204ENST00000530996 PKD1L1Q8TDX9 2849 aa13.15□□□□□ -0.3
CHMP4A-204ENST00000530996 LGALS8O00214 317 aa13.15□□□□□ -0.3
CHMP4A-204ENST00000530996 P2RY10O00398 339 aa13.15□□□□□ -0.3
CHMP4A-204ENST00000530996 OR10H3O60404 316 aa13.15□□□□□ -0.3
CHMP4A-204ENST00000530996 CCDC22O60826 627 aa13.15□□□□□ -0.3
CHMP4A-204ENST00000530996 GADD45GO95257 159 aa13.15□□□□□ -0.3
CHMP4A-204ENST00000530996 FSTL3O95633 263 aa13.15□□□□□ -0.3
CHMP4A-204ENST00000530996 BPIFB3P59826 476 aa13.15□□□□□ -0.3
CHMP4A-204ENST00000530996 OLFML2AQ68BL7 652 aa13.15□□□□□ -0.3
CHMP4A-204ENST00000530996 FAM86B1Q8N7N1 296 aa13.15□□□□□ -0.3
CHMP4A-204ENST00000530996 PROKR2Q8NFJ6 384 aa13.15□□□□□ -0.3
CHMP4A-204ENST00000530996 SSMEM1Q8WWF3 244 aa13.15□□□□□ -0.3
CHMP4A-204ENST00000530996 ADA2Q9NZK5 511 aa13.15□□□□□ -0.3
CHMP4A-204ENST00000530996 CTSZQ9UBR2 303 aa13.15□□□□□ -0.3
CHMP4A-204ENST00000530996 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.14□□□□□ -0.31
CHMP4A-204ENST00000530996 ZNF879B4DU55 563 aa13.14□□□□□ -0.31
CHMP4A-204ENST00000530996 M0QZ24 198 aa13.14□□□□□ -0.31
CHMP4A-204ENST00000530996 MELTFP08582 738 aa13.14□□□□□ -0.31
CHMP4A-204ENST00000530996 H2AFXP16104 143 aaPredicted RBP13.14□□□□□ -0.31
CHMP4A-204ENST00000530996 ZNF823P16415 610 aa13.14□□□□□ -0.31
CHMP4A-204ENST00000530996 SMIM11AP58511 58 aa13.14□□□□□ -0.31
CHMP4A-204ENST00000530996 PSME3P61289 254 aa13.14□□□□□ -0.31
CHMP4A-204ENST00000530996 SLC35F1Q5T1Q4 408 aa13.14□□□□□ -0.31
CHMP4A-204ENST00000530996 GLYATQ6IB77 296 aa13.14□□□□□ -0.31
CHMP4A-204ENST00000530996 ZNF841Q6ZN19 808 aa13.14□□□□□ -0.31
CHMP4A-204ENST00000530996 NAA40Q86UY6 237 aa13.14□□□□□ -0.31
CHMP4A-204ENST00000530996 RNF148Q8N7C7 305 aa13.14□□□□□ -0.31
CHMP4A-204ENST00000530996 PNLDC1Q8NA58 520 aaKnown RBP13.14□□□□□ -0.31
CHMP4A-204ENST00000530996 OR52L1Q8NGH7 329 aa13.14□□□□□ -0.31
CHMP4A-204ENST00000530996 OR2AE1Q8NHA4 323 aa13.14□□□□□ -0.31
CHMP4A-204ENST00000530996 LHX4Q969G2 390 aa13.14□□□□□ -0.31
CHMP4A-204ENST00000530996 UBE2FQ969M7 185 aa13.14□□□□□ -0.31
CHMP4A-204ENST00000530996 COPS4Q9BT78 406 aa13.14□□□□□ -0.31
CHMP4A-204ENST00000530996 SLC22A4Q9H015 551 aa13.14□□□□□ -0.31
CHMP4A-204ENST00000530996 SPAG4Q9NPE6 437 aa13.14□□□□□ -0.31
CHMP4A-204ENST00000530996 TRIM36Q9NQ86 728 aa13.14□□□□□ -0.31
CHMP4A-204ENST00000530996 C1orf123Q9NWV4 160 aa13.14□□□□□ -0.31
CHMP4A-204ENST00000530996 C1RLQ9NZP8 487 aa13.14□□□□□ -0.31
CHMP4A-204ENST00000530996 N6AMT1Q9Y5N5 214 aa13.14□□□□□ -0.31
CHMP4A-204ENST00000530996 TRRAPQ9Y4A5 3859 aa13.13□□□□□ -0.31
CHMP4A-204ENST00000530996 TRAV38-1A0A0B4J264 116 aa13.13□□□□□ -0.31
CHMP4A-204ENST00000530996 A0A1B0GWJ7 208 aa13.13□□□□□ -0.31
CHMP4A-204ENST00000530996 CD300LBA8K4G0 201 aa13.13□□□□□ -0.31
CHMP4A-204ENST00000530996 GYPAP02724 150 aa13.13□□□□□ -0.31
CHMP4A-204ENST00000530996 GRPP07492 148 aa13.13□□□□□ -0.31
CHMP4A-204ENST00000530996 IFNGR2P38484 337 aa13.13□□□□□ -0.31
CHMP4A-204ENST00000530996 PSMB10P40306 273 aa13.13□□□□□ -0.31
CHMP4A-204ENST00000530996 PDCD1Q15116 288 aa13.13□□□□□ -0.31
CHMP4A-204ENST00000530996 RSPO1Q2MKA7 263 aaPredicted RBP13.13□□□□□ -0.31
CHMP4A-204ENST00000530996 RFX4Q33E94 735 aa13.13□□□□□ -0.31
CHMP4A-204ENST00000530996 SNAI3Q3KNW1 292 aa13.13□□□□□ -0.31
CHMP4A-204ENST00000530996 KRTAP27-1Q3LI81 207 aa13.13□□□□□ -0.31
CHMP4A-204ENST00000530996 HACD2Q6Y1H2 254 aa13.13□□□□□ -0.31
CHMP4A-204ENST00000530996 Q6YL49 198 aa13.13□□□□□ -0.31
CHMP4A-204ENST00000530996 PDZD9Q8IXQ8 264 aa13.13□□□□□ -0.31
CHMP4A-204ENST00000530996 TMEM86BQ8N661 226 aa13.13□□□□□ -0.31
CHMP4A-204ENST00000530996 OR4C15Q8NGM1 316 aa13.13□□□□□ -0.31
CHMP4A-204ENST00000530996 ST8SIA4Q92187 359 aa13.13□□□□□ -0.31
CHMP4A-204ENST00000530996 MCUR1Q96AQ8 359 aa13.13□□□□□ -0.31
CHMP4A-204ENST00000530996 FAM71F1Q96KD3 344 aaPredicted RBP13.13□□□□□ -0.31
CHMP4A-204ENST00000530996 WDFY2Q96P53 400 aa13.13□□□□□ -0.31
CHMP4A-204ENST00000530996 TRIM15Q9C019 465 aa13.13□□□□□ -0.31
CHMP4A-204ENST00000530996 DCAF13Q9NV06 445 aaKnown RBP13.13□□□□□ -0.31
CHMP4A-204ENST00000530996 PDP1Q9P0J1 537 aaPredicted RBP13.13□□□□□ -0.31
CHMP4A-204ENST00000530996 CYB5R1Q9UHQ9 305 aa13.13□□□□□ -0.31
CHMP4A-204ENST00000530996 KCNG2Q9UJ96 466 aa13.13□□□□□ -0.31
CHMP4A-204ENST00000530996 POMT1Q9Y6A1 747 aa13.13□□□□□ -0.31
CHMP4A-204ENST00000530996 CLPSL1A2RUU4 121 aa13.12□□□□□ -0.31
CHMP4A-204ENST00000530996 OOEPA6NGQ2 149 aa13.12□□□□□ -0.31
CHMP4A-204ENST00000530996 ARPC3O15145 178 aa13.12□□□□□ -0.31
CHMP4A-204ENST00000530996 GMDSO60547 372 aa13.12□□□□□ -0.31
CHMP4A-204ENST00000530996 NDUFA7O95182 113 aa13.12□□□□□ -0.31
CHMP4A-204ENST00000530996 LIPFP07098 398 aa13.12□□□□□ -0.31
CHMP4A-204ENST00000530996 PYCR1P32322 319 aa13.12□□□□□ -0.31
CHMP4A-204ENST00000530996 RPS27P42677 84 aaKnown RBP13.12□□□□□ -0.31
CHMP4A-204ENST00000530996 ZNF92Q03936 586 aa13.12□□□□□ -0.31
CHMP4A-204ENST00000530996 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.12□□□□□ -0.31
CHMP4A-204ENST00000530996 TAF13Q15543 124 aa13.12□□□□□ -0.31
CHMP4A-204ENST00000530996 C8orf82Q6P1X6 216 aaPredicted RBP13.12□□□□□ -0.31
CHMP4A-204ENST00000530996 ZNF620Q6ZNG0 422 aa13.12□□□□□ -0.31
CHMP4A-204ENST00000530996 ZBTB46Q86UZ6 589 aa13.12□□□□□ -0.31
CHMP4A-204ENST00000530996 TBC1D15Q8TC07 691 aa13.12□□□□□ -0.31
CHMP4A-204ENST00000530996 MAP6Q96JE9 813 aa13.12□□□□□ -0.31
CHMP4A-204ENST00000530996 C7orf34Q96L11 122 aa13.12□□□□□ -0.31
CHMP4A-204ENST00000530996 DHRS1Q96LJ7 313 aa13.12□□□□□ -0.31
CHMP4A-204ENST00000530996 TBX15Q96SF7 602 aa13.12□□□□□ -0.31
CHMP4A-204ENST00000530996 SMURF1Q9HCE7 757 aa13.12□□□□□ -0.31
CHMP4A-204ENST00000530996 PNRC2Q9NPJ4 139 aaKnown RBP13.12□□□□□ -0.31
CHMP4A-204ENST00000530996 ACOXLQ9NUZ1 547 aa13.12□□□□□ -0.31
CHMP4A-204ENST00000530996 ABCD2Q9UBJ2 740 aa13.12□□□□□ -0.31
CHMP4A-204ENST00000530996 IGHV1-69DA0A0B4J2H0 117 aa13.11□□□□□ -0.31
CHMP4A-204ENST00000530996 CENPVL3A0A0U1RRI6 287 aa13.11□□□□□ -0.31
CHMP4A-204ENST00000530996 OR6C68A6NDL8 312 aa13.11□□□□□ -0.31
CHMP4A-204ENST00000530996 TVP23AA6NH52 213 aa13.11□□□□□ -0.31
CHMP4A-204ENST00000530996 TIMM23O14925 209 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms