RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 TAF9Q16594 264 aa12.35□□□□□ -0.43
CAPN1-219ENST00000530495 C11orf91Q3C1V1 193 aa12.35□□□□□ -0.43
CAPN1-219ENST00000530495 METTL11BQ5VVY1 283 aa12.35□□□□□ -0.43
CAPN1-219ENST00000530495 SMARCD3Q6STE5 483 aa12.35□□□□□ -0.43
CAPN1-219ENST00000530495 LINC00346Q8IVM7 164 aa12.35□□□□□ -0.43
CAPN1-219ENST00000530495 ERMAPQ96PL5 475 aaPredicted RBP12.35□□□□□ -0.43
CAPN1-219ENST00000530495 MMADHCQ9H3L0 296 aaPredicted RBP12.35□□□□□ -0.43
CAPN1-219ENST00000530495 PNRC2Q9NPJ4 139 aaKnown RBP12.35□□□□□ -0.43
CAPN1-219ENST00000530495 TRIM36Q9NQ86 728 aa12.35□□□□□ -0.43
CAPN1-219ENST00000530495 NDUFAF4Q9P032 175 aa12.35□□□□□ -0.43
CAPN1-219ENST00000530495 CYB5R1Q9UHQ9 305 aa12.35□□□□□ -0.43
CAPN1-219ENST00000530495 AURKCQ9UQB9 309 aa12.35□□□□□ -0.43
CAPN1-219ENST00000530495 NOP16Q9Y3C1 178 aaKnown RBP12.35□□□□□ -0.43
CAPN1-219ENST00000530495 FAM32AQ9Y421 112 aaKnown RBP12.35□□□□□ -0.43
CAPN1-219ENST00000530495 TRAV38-1A0A0B4J264 116 aa12.34□□□□□ -0.43
CAPN1-219ENST00000530495 CD300LBA8K4G0 201 aa12.34□□□□□ -0.43
CAPN1-219ENST00000530495 NME4O00746 187 aa12.34□□□□□ -0.43
CAPN1-219ENST00000530495 ARPC3O15145 178 aa12.34□□□□□ -0.43
CAPN1-219ENST00000530495 SLC22A2O15244 555 aa12.34□□□□□ -0.43
CAPN1-219ENST00000530495 ADAM20O43506 726 aa12.34□□□□□ -0.43
CAPN1-219ENST00000530495 GPR137BO60478 399 aa12.34□□□□□ -0.43
CAPN1-219ENST00000530495 IGHV4-59P01825 116 aa12.34□□□□□ -0.43
CAPN1-219ENST00000530495 RHCEP18577 417 aa12.34□□□□□ -0.43
CAPN1-219ENST00000530495 GGT2P36268 569 aa12.34□□□□□ -0.43
CAPN1-219ENST00000530495 TPTEP56180 551 aa12.34□□□□□ -0.43
CAPN1-219ENST00000530495 SEC23BQ15437 767 aa12.34□□□□□ -0.43
CAPN1-219ENST00000530495 RFX4Q33E94 735 aa12.34□□□□□ -0.43
CAPN1-219ENST00000530495 SLC36A3Q495N2 470 aa12.34□□□□□ -0.43
CAPN1-219ENST00000530495 FGD3Q5JSP0 725 aa12.34□□□□□ -0.43
CAPN1-219ENST00000530495 MRPL21Q7Z2W9 205 aaKnown RBP12.34□□□□□ -0.43
CAPN1-219ENST00000530495 ZBTB46Q86UZ6 589 aa12.34□□□□□ -0.43
CAPN1-219ENST00000530495 LDLRAD3Q86YD5 345 aa12.34□□□□□ -0.43
CAPN1-219ENST00000530495 BOLLQ8N9W6 283 aaKnown RBP12.34□□□□□ -0.43
CAPN1-219ENST00000530495 OR2AJ1Q8NGZ0 328 aa12.34□□□□□ -0.43
CAPN1-219ENST00000530495 RP9Q8TA86 221 aaKnown RBP12.34□□□□□ -0.43
CAPN1-219ENST00000530495 LHX4Q969G2 390 aa12.34□□□□□ -0.43
CAPN1-219ENST00000530495 NMNAT3Q96T66 252 aa12.34□□□□□ -0.43
CAPN1-219ENST00000530495 PKP2Q99959 881 aa12.34□□□□□ -0.43
CAPN1-219ENST00000530495 HOPXQ9BPY8 73 aaPredicted RBP12.34□□□□□ -0.43
CAPN1-219ENST00000530495 FUZQ9BT04 418 aa12.34□□□□□ -0.43
CAPN1-219ENST00000530495 RASSF4Q9H2L5 321 aa12.34□□□□□ -0.43
CAPN1-219ENST00000530495 SMURF1Q9HCE7 757 aa12.34□□□□□ -0.43
CAPN1-219ENST00000530495 CAPN7Q9Y6W3 813 aa12.34□□□□□ -0.43
CAPN1-219ENST00000530495 TRBV4-1A0A0J9YWV2 114 aa12.33□□□□□ -0.44
CAPN1-219ENST00000530495 A0A0U1RQK1 487 aa12.33□□□□□ -0.44
CAPN1-219ENST00000530495 OOEPA6NGQ2 149 aa12.33□□□□□ -0.44
CAPN1-219ENST00000530495 C3orf80F5H4A9 247 aa12.33□□□□□ -0.44
CAPN1-219ENST00000530495 FCN3O75636 299 aa12.33□□□□□ -0.44
CAPN1-219ENST00000530495 ECDO95905 644 aaPredicted RBP12.33□□□□□ -0.44
CAPN1-219ENST00000530495 RENP00797 406 aa12.33□□□□□ -0.44
CAPN1-219ENST00000530495 GSK3BP49841 420 aa12.33□□□□□ -0.44
CAPN1-219ENST00000530495 ARF6P62330 175 aa12.33□□□□□ -0.44
CAPN1-219ENST00000530495 DBPQ10586 325 aaPredicted RBP12.33□□□□□ -0.44
CAPN1-219ENST00000530495 SF3A3Q12874 501 aaKnown RBP eCLIP12.33□□□□□ -0.442e-9■■■□□ 17.9
CAPN1-219ENST00000530495 OR8B8Q15620 311 aa12.33□□□□□ -0.44
CAPN1-219ENST00000530495 CGB2Q6NT52 195 aa12.33□□□□□ -0.44
CAPN1-219ENST00000530495 C8orf82Q6P1X6 216 aaPredicted RBP12.33□□□□□ -0.44
CAPN1-219ENST00000530495 BTN2A1Q7KYR7 527 aa12.33□□□□□ -0.44
CAPN1-219ENST00000530495 HDXQ7Z353 690 aa12.33□□□□□ -0.44
CAPN1-219ENST00000530495 ZSCAN4Q8NAM6 433 aaPredicted RBP12.33□□□□□ -0.44
CAPN1-219ENST00000530495 UBE2FQ969M7 185 aa12.33□□□□□ -0.44
CAPN1-219ENST00000530495 C7orf34Q96L11 122 aa12.33□□□□□ -0.44
CAPN1-219ENST00000530495 DHRS1Q96LJ7 313 aa12.33□□□□□ -0.44
CAPN1-219ENST00000530495 VIPAS39Q9H9C1 493 aa12.33□□□□□ -0.44
CAPN1-219ENST00000530495 KRCC1Q9NPI7 259 aaPredicted RBP12.33□□□□□ -0.44
CAPN1-219ENST00000530495 FGFR1OP2Q9NVK5 253 aa12.33□□□□□ -0.44
CAPN1-219ENST00000530495 SLC22A31A6NKX4 558 aa12.32□□□□□ -0.44
CAPN1-219ENST00000530495 DVL1O14640 695 aa12.32□□□□□ -0.44
CAPN1-219ENST00000530495 LHBP01229 141 aa12.32□□□□□ -0.44
CAPN1-219ENST00000530495 NCK1P16333 377 aa12.32□□□□□ -0.44
CAPN1-219ENST00000530495 HIST1H1CP16403 213 aaKnown RBP12.32□□□□□ -0.44
CAPN1-219ENST00000530495 SLC7A2P52569 658 aa12.32□□□□□ -0.44
CAPN1-219ENST00000530495 ZNF92Q03936 586 aa12.32□□□□□ -0.44
CAPN1-219ENST00000530495 GDPGP1Q6ZNW5 385 aa12.32□□□□□ -0.44
CAPN1-219ENST00000530495 PIP4P2Q8N4L2 257 aa12.32□□□□□ -0.44
CAPN1-219ENST00000530495 SPERTQ8NA61 448 aa12.32□□□□□ -0.44
CAPN1-219ENST00000530495 SCCPDHQ8NBX0 429 aa12.32□□□□□ -0.44
CAPN1-219ENST00000530495 OR4K13Q8NH42 304 aa12.32□□□□□ -0.44
CAPN1-219ENST00000530495 FAM162AQ96A26 154 aa12.32□□□□□ -0.44
CAPN1-219ENST00000530495 MAP6Q96JE9 813 aa12.32□□□□□ -0.44
CAPN1-219ENST00000530495 ADAT1Q9BUB4 502 aaKnown RBP12.32□□□□□ -0.44
CAPN1-219ENST00000530495 DPAGT1Q9H3H5 408 aa12.32□□□□□ -0.44
CAPN1-219ENST00000530495 C16orf95Q9H693 158 aa12.32□□□□□ -0.44
CAPN1-219ENST00000530495 CNTD2Q9H8S5 307 aa12.32□□□□□ -0.44
CAPN1-219ENST00000530495 TCF7L1Q9HCS4 588 aa12.32□□□□□ -0.44
CAPN1-219ENST00000530495 RPRD1BQ9NQG5 326 aaKnown RBP12.32□□□□□ -0.44
CAPN1-219ENST00000530495 C1orf123Q9NWV4 160 aa12.32□□□□□ -0.44
CAPN1-219ENST00000530495 MRPL15Q9P015 296 aaKnown RBP12.32□□□□□ -0.44
CAPN1-219ENST00000530495 KAAG1Q9UBP8 84 aa12.32□□□□□ -0.44
CAPN1-219ENST00000530495 OR6C68A6NDL8 312 aa12.31□□□□□ -0.44
CAPN1-219ENST00000530495 M0R135 149 aa12.31□□□□□ -0.44
CAPN1-219ENST00000530495 IDH3BO43837 385 aa12.31□□□□□ -0.44
CAPN1-219ENST00000530495 HLA-DQA2P01906 255 aa12.31□□□□□ -0.44
CAPN1-219ENST00000530495 GYPAP02724 150 aa12.31□□□□□ -0.44
CAPN1-219ENST00000530495 SLC6A6P31641 620 aa12.31□□□□□ -0.44
CAPN1-219ENST00000530495 SNAI3Q3KNW1 292 aa12.31□□□□□ -0.44
CAPN1-219ENST00000530495 CDONQ4KMG0 1287 aa12.31□□□□□ -0.44
CAPN1-219ENST00000530495 Q6ZSV7 163 aa12.31□□□□□ -0.44
CAPN1-219ENST00000530495 ZNF826PQ6ZT77 177 aa12.31□□□□□ -0.44
CAPN1-219ENST00000530495 FAM90A1Q86YD7 464 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms