RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 DCTN6O00399 190 aa4.46□□□□□ -1.7
PCF11-202ENST00000528336 PLPP3O14495 311 aa4.46□□□□□ -1.7
PCF11-202ENST00000528336 EI24O14681 340 aa4.46□□□□□ -1.7
PCF11-202ENST00000528336 ZNF354AO60765 605 aaPredicted RBP4.46□□□□□ -1.7
PCF11-202ENST00000528336 RAMP1O60894 148 aa4.46□□□□□ -1.7
PCF11-202ENST00000528336 OR7A10O76100 309 aa4.46□□□□□ -1.7
PCF11-202ENST00000528336 VENTXO95231 258 aa4.46□□□□□ -1.7
PCF11-202ENST00000528336 JCHAINP01591 159 aa4.46□□□□□ -1.7
PCF11-202ENST00000528336 OR4E1P0C645 316 aa4.46□□□□□ -1.7
PCF11-202ENST00000528336 PSMC3P17980 439 aa4.46□□□□□ -1.7
PCF11-202ENST00000528336 FASP25445 335 aa4.46□□□□□ -1.7
PCF11-202ENST00000528336 CALML3P27482 149 aa4.46□□□□□ -1.7
PCF11-202ENST00000528336 RPL4P36578 427 aaKnown RBP4.46□□□□□ -1.7
PCF11-202ENST00000528336 COILP38432 576 aaPredicted RBP4.46□□□□□ -1.7
PCF11-202ENST00000528336 XCR1P46094 333 aa4.46□□□□□ -1.7
PCF11-202ENST00000528336 YAP1P46937 504 aaKnown RBP4.46□□□□□ -1.7
PCF11-202ENST00000528336 TUFMP49411 452 aaKnown RBP4.46□□□□□ -1.7
PCF11-202ENST00000528336 GNG10P50151 68 aa4.46□□□□□ -1.7
PCF11-202ENST00000528336 CLDN6P56747 220 aa4.46□□□□□ -1.7
PCF11-202ENST00000528336 C2orf80Q0P641 193 aa4.46□□□□□ -1.7
PCF11-202ENST00000528336 CAPRIN1Q14444 709 aaKnown RBP4.46□□□□□ -1.7
PCF11-202ENST00000528336 LAGE3Q14657 143 aa4.46□□□□□ -1.7
PCF11-202ENST00000528336 PDK2Q15119 407 aa4.46□□□□□ -1.7
PCF11-202ENST00000528336 CCL14Q16627 93 aa4.46□□□□□ -1.7
PCF11-202ENST00000528336 UNC93AQ86WB7 457 aa4.46□□□□□ -1.7
PCF11-202ENST00000528336 CYP4Z2PQ8N1L4 340 aa4.46□□□□□ -1.7
PCF11-202ENST00000528336 KIR3DL3Q8N743 410 aa4.46□□□□□ -1.7
PCF11-202ENST00000528336 CCDC112Q8NEF3 446 aa4.46□□□□□ -1.7
PCF11-202ENST00000528336 CCDC26Q8TAB7 109 aa4.46□□□□□ -1.7
PCF11-202ENST00000528336 FBXO25Q8TCJ0 367 aa4.46□□□□□ -1.7
PCF11-202ENST00000528336 NEIL2Q969S2 332 aa4.46□□□□□ -1.7
PCF11-202ENST00000528336 CENPNQ96H22 339 aaPredicted RBP4.46□□□□□ -1.7
PCF11-202ENST00000528336 OR5B2Q96R09 309 aa4.46□□□□□ -1.7
PCF11-202ENST00000528336 SLC35A5Q9BS91 424 aa4.46□□□□□ -1.7
PCF11-202ENST00000528336 DCUN1D5Q9BTE7 237 aa4.46□□□□□ -1.7
PCF11-202ENST00000528336 PLEKHA1Q9HB21 404 aa4.46□□□□□ -1.7
PCF11-202ENST00000528336 HRASLSQ9HDD0 168 aa4.46□□□□□ -1.7
PCF11-202ENST00000528336 PLEKHJ1Q9NW61 149 aa4.46□□□□□ -1.7
PCF11-202ENST00000528336 TAS2R7Q9NYW3 318 aa4.46□□□□□ -1.7
PCF11-202ENST00000528336 EIF3KQ9UBQ5 218 aaKnown RBP4.46□□□□□ -1.7
PCF11-202ENST00000528336 CLEC4EQ9ULY5 219 aa4.46□□□□□ -1.7
PCF11-202ENST00000528336 RCL1Q9Y2P8 373 aaKnown RBP4.46□□□□□ -1.7
PCF11-202ENST00000528336 PRG3Q9Y2Y8 225 aaPredicted RBP4.46□□□□□ -1.7
PCF11-202ENST00000528336 ZNF337Q9Y3M9 751 aa4.46□□□□□ -1.7
PCF11-202ENST00000528336 RALGAPA1Q6GYQ0 2036 aa4.46□□□□□ -1.7
PCF11-202ENST00000528336 COL11A1P12107 1806 aaPredicted RBP4.46□□□□□ -1.7
PCF11-202ENST00000528336 ASTN1O14525 1302 aa4.46□□□□□ -1.7
PCF11-202ENST00000528336 AGRNO00468 2067 aa4.45□□□□□ -1.7
PCF11-202ENST00000528336 IGLV3-10A0A075B6K4 115 aa4.45□□□□□ -1.7
PCF11-202ENST00000528336 HSD17B6O14756 317 aa4.45□□□□□ -1.7
PCF11-202ENST00000528336 PHOX2AO14813 284 aa4.45□□□□□ -1.7
PCF11-202ENST00000528336 PPIHO43447 177 aaKnown RBP4.45□□□□□ -1.7
PCF11-202ENST00000528336 CXCL13O43927 109 aa4.45□□□□□ -1.7
PCF11-202ENST00000528336 OAS1P00973 400 aaKnown RBP4.45□□□□□ -1.7
PCF11-202ENST00000528336 FGGP02679 453 aa4.45□□□□□ -1.7
PCF11-202ENST00000528336 OCM2P0CE71 109 aa4.45□□□□□ -1.7
PCF11-202ENST00000528336 POLR2EP19388 210 aaKnown RBP4.45□□□□□ -1.7
PCF11-202ENST00000528336 ATP5A1P25705 553 aaKnown RBP4.45□□□□□ -1.7
PCF11-202ENST00000528336 ELK3P41970 407 aa4.45□□□□□ -1.7
PCF11-202ENST00000528336 NKX2-5P52952 324 aaPredicted RBP4.45□□□□□ -1.7
PCF11-202ENST00000528336 S100A12P80511 92 aa4.45□□□□□ -1.7
PCF11-202ENST00000528336 CDC20Q12834 499 aa4.45□□□□□ -1.7
PCF11-202ENST00000528336 TPBGQ13641 420 aa4.45□□□□□ -1.7
PCF11-202ENST00000528336 GNMTQ14749 295 aa4.45□□□□□ -1.7
PCF11-202ENST00000528336 MAD2L1BPQ15013 274 aaPredicted RBP4.45□□□□□ -1.7
PCF11-202ENST00000528336 GABRA6Q16445 453 aa4.45□□□□□ -1.7
PCF11-202ENST00000528336 NDUFA9Q16795 377 aa4.45□□□□□ -1.7
PCF11-202ENST00000528336 DUSP7Q16829 419 aa4.45□□□□□ -1.7
PCF11-202ENST00000528336 TMEM249Q2WGJ8 235 aa4.45□□□□□ -1.7
PCF11-202ENST00000528336 RBM48Q5RL73 367 aaKnown RBP4.45□□□□□ -1.7
PCF11-202ENST00000528336 PPM1LQ5SGD2 360 aa4.45□□□□□ -1.7
PCF11-202ENST00000528336 DCST2Q5T1A1 773 aa4.45□□□□□ -1.7
PCF11-202ENST00000528336 ZNF836Q6ZNA1 936 aa4.45□□□□□ -1.7
PCF11-202ENST00000528336 SSX7Q7RTT5 188 aa4.45□□□□□ -1.7
PCF11-202ENST00000528336 GID4Q8IVV7 300 aa4.45□□□□□ -1.7
PCF11-202ENST00000528336 C2orf73Q8N5S3 287 aaPredicted RBP4.45□□□□□ -1.7
PCF11-202ENST00000528336 CCDC71LQ8N9Z2 235 aa4.45□□□□□ -1.7
PCF11-202ENST00000528336 OR52H1Q8NGJ2 320 aa4.45□□□□□ -1.7
PCF11-202ENST00000528336 OR1K1Q8NGR3 316 aa4.45□□□□□ -1.7
PCF11-202ENST00000528336 OR6K2Q8NGY2 324 aa4.45□□□□□ -1.7
PCF11-202ENST00000528336 ACTL9Q8TC94 416 aa4.45□□□□□ -1.7
PCF11-202ENST00000528336 ZPLD1Q8TCW7 415 aa4.45□□□□□ -1.7
PCF11-202ENST00000528336 AGAP11Q8TF27 550 aa4.45□□□□□ -1.7
PCF11-202ENST00000528336 WDR34Q96EX3 536 aa4.45□□□□□ -1.7
PCF11-202ENST00000528336 NAA50Q9GZZ1 169 aaKnown RBP4.45□□□□□ -1.7
PCF11-202ENST00000528336 CHRNA10Q9GZZ6 450 aa4.45□□□□□ -1.7
PCF11-202ENST00000528336 C6orf50Q9HD87 102 aa4.45□□□□□ -1.7
PCF11-202ENST00000528336 ABCB10Q9NRK6 738 aa4.45□□□□□ -1.7
PCF11-202ENST00000528336 ZNF581Q9P0T4 197 aa4.45□□□□□ -1.7
PCF11-202ENST00000528336 CYB5R1Q9UHQ9 305 aa4.45□□□□□ -1.7
PCF11-202ENST00000528336 UBQLN1Q9UMX0 589 aaKnown RBP4.45□□□□□ -1.7
PCF11-202ENST00000528336 MRPS18BQ9Y676 258 aaKnown RBP4.45□□□□□ -1.7
PCF11-202ENST00000528336 BAZ2BQ9UIF8 2168 aaKnown RBP4.45□□□□□ -1.7
PCF11-202ENST00000528336 CASP8AP2Q9UKL3 1982 aa4.45□□□□□ -1.7
PCF11-202ENST00000528336 ZSWIM8A7E2V4 1837 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 A0A0A6YYD5 115 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 PP2D1A8MPX8 630 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 TMEM114B3SHH9 223 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 GOSR2O14653 212 aa4.44□□□□□ -1.7
PCF11-202ENST00000528336 RCBTB2O95199 551 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms