RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 HCAR1Q9BXC0 346 aa8.81□□□□□ -1
CPSF1-203ENST00000527916 DGCR6LQ9BY27 220 aa8.81□□□□□ -1
CPSF1-203ENST00000527916 EGLN3Q9H6Z9 239 aa8.81□□□□□ -1
CPSF1-203ENST00000527916 PATZ1Q9HBE1 687 aaKnown RBP8.81□□□□□ -1
CPSF1-203ENST00000527916 GCM1Q9NP62 436 aa8.81□□□□□ -1
CPSF1-203ENST00000527916 PNRC2Q9NPJ4 139 aaKnown RBP8.81□□□□□ -1
CPSF1-203ENST00000527916 PTTG3PQ9NZH4 202 aa8.81□□□□□ -1
CPSF1-203ENST00000527916 OR5V1Q9UGF6 321 aa8.81□□□□□ -1
CPSF1-203ENST00000527916 PRPF19Q9UMS4 504 aaKnown RBP8.81□□□□□ -1
CPSF1-203ENST00000527916 BAIAP2Q9UQB8 552 aa8.81□□□□□ -1
CPSF1-203ENST00000527916 NOTCH3Q9UM47 2321 aa8.8□□□□□ -1
CPSF1-203ENST00000527916 SRRM5B3KS81 715 aa8.8□□□□□ -1
CPSF1-203ENST00000527916 F5H5K5 113 aa8.8□□□□□ -1
CPSF1-203ENST00000527916 TMEM178BH3BS89 294 aa8.8□□□□□ -1
CPSF1-203ENST00000527916 HLA-DQA2P01906 255 aa8.8□□□□□ -1
CPSF1-203ENST00000527916 IGHV4-38-2P0DP08 117 aa8.8□□□□□ -1
CPSF1-203ENST00000527916 ZNF823P16415 610 aa8.8□□□□□ -1
CPSF1-203ENST00000527916 OTX1P32242 354 aaPredicted RBP8.8□□□□□ -1
CPSF1-203ENST00000527916 SLC6A9P48067 706 aa8.8□□□□□ -1
CPSF1-203ENST00000527916 SRP9P49458 86 aaKnown RBP8.8□□□□□ -1
CPSF1-203ENST00000527916 ERFP50548 548 aa8.8□□□□□ -1
CPSF1-203ENST00000527916 TPTEP56180 551 aa8.8□□□□□ -1
CPSF1-203ENST00000527916 BTG1P62324 171 aa8.8□□□□□ -1
CPSF1-203ENST00000527916 MS4A2Q01362 244 aa8.8□□□□□ -1
CPSF1-203ENST00000527916 PCK2Q16822 640 aa8.8□□□□□ -1
CPSF1-203ENST00000527916 MICAQ29983 383 aa8.8□□□□□ -1
CPSF1-203ENST00000527916 FAM98BQ52LJ0 330 aaKnown RBP8.8□□□□□ -1
CPSF1-203ENST00000527916 ESCO2Q56NI9 601 aa8.8□□□□□ -1
CPSF1-203ENST00000527916 TEX30Q5JUR7 227 aa8.8□□□□□ -1
CPSF1-203ENST00000527916 CLEC12AQ5QGZ9 265 aa8.8□□□□□ -1
CPSF1-203ENST00000527916 OR2T5Q6IEZ7 315 aa8.8□□□□□ -1
CPSF1-203ENST00000527916 OR2T2Q6IF00 324 aa8.8□□□□□ -1
CPSF1-203ENST00000527916 BTNL3Q6UXE8 466 aa8.8□□□□□ -1
CPSF1-203ENST00000527916 CD300LDQ6UXZ3 194 aa8.8□□□□□ -1
CPSF1-203ENST00000527916 REC114Q7Z4M0 266 aa8.8□□□□□ -1
CPSF1-203ENST00000527916 MUC20Q8N307 709 aaPredicted RBP8.8□□□□□ -1
CPSF1-203ENST00000527916 CELF2-AS1Q8N7Q2 184 aa8.8□□□□□ -1
CPSF1-203ENST00000527916 ATG16L2Q8NAA4 619 aa8.8□□□□□ -1
CPSF1-203ENST00000527916 OR9Q2Q8NGE9 314 aa8.8□□□□□ -1
CPSF1-203ENST00000527916 OR2T29Q8NH02 315 aa8.8□□□□□ -1
CPSF1-203ENST00000527916 ERGIC1Q969X5 290 aa8.8□□□□□ -1
CPSF1-203ENST00000527916 ASB9Q96DX5 294 aa8.8□□□□□ -1
CPSF1-203ENST00000527916 MEGF10Q96KG7 1140 aa8.8□□□□□ -1
CPSF1-203ENST00000527916 TMEM100Q9NV29 134 aa8.8□□□□□ -1
CPSF1-203ENST00000527916 MRPL22Q9NWU5 206 aaKnown RBP8.8□□□□□ -1
CPSF1-203ENST00000527916 DCAF16Q9NXF7 216 aa8.8□□□□□ -1
CPSF1-203ENST00000527916 TENM3Q9P273 2699 aa8.79□□□□□ -1
CPSF1-203ENST00000527916 IGHV3OR16-10A0A075B7F0 116 aa8.79□□□□□ -1
CPSF1-203ENST00000527916 A8MXK9 166 aa8.79□□□□□ -1
CPSF1-203ENST00000527916 F5H0A9 414 aaPredicted RBP8.79□□□□□ -1
CPSF1-203ENST00000527916 C3orf80F5H4A9 247 aa8.79□□□□□ -1
CPSF1-203ENST00000527916 WNT2P09544 360 aa8.79□□□□□ -1
CPSF1-203ENST00000527916 RAP2AP10114 183 aa8.79□□□□□ -1
CPSF1-203ENST00000527916 HOXB6P17509 224 aaKnown RBP8.79□□□□□ -1
CPSF1-203ENST00000527916 MDH2P40926 338 aaKnown RBP8.79□□□□□ -1
CPSF1-203ENST00000527916 GATA4P43694 442 aa8.79□□□□□ -1
CPSF1-203ENST00000527916 BLVRAP53004 296 aa8.79□□□□□ -1
CPSF1-203ENST00000527916 SLC25A1P53007 311 aa8.79□□□□□ -1
CPSF1-203ENST00000527916 RPL15P61313 204 aaKnown RBP8.79□□□□□ -1
CPSF1-203ENST00000527916 PAX8Q06710 450 aa8.79□□□□□ -1
CPSF1-203ENST00000527916 TRAP1Q12931 704 aaKnown RBP8.79□□□□□ -1
CPSF1-203ENST00000527916 MALLQ13021 153 aa8.79□□□□□ -1
CPSF1-203ENST00000527916 GK2Q14410 553 aaPredicted RBP8.79□□□□□ -1
CPSF1-203ENST00000527916 ZMYND11Q15326 602 aa8.79□□□□□ -1
CPSF1-203ENST00000527916 FIP1L1Q6UN15 594 aaKnown RBP8.79□□□□□ -1
CPSF1-203ENST00000527916 DRAM2Q6UX65 266 aa8.79□□□□□ -1
CPSF1-203ENST00000527916 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.79□□□□□ -1
CPSF1-203ENST00000527916 NAA40Q86UY6 237 aa8.79□□□□□ -1
CPSF1-203ENST00000527916 LINC00346Q8IVM7 164 aa8.79□□□□□ -1
CPSF1-203ENST00000527916 OR5AS1Q8N127 324 aa8.79□□□□□ -1
CPSF1-203ENST00000527916 AQP11Q8NBQ7 271 aa8.79□□□□□ -1
CPSF1-203ENST00000527916 SLC37A3Q8NCC5 494 aa8.79□□□□□ -1
CPSF1-203ENST00000527916 CCDC197Q8NCU1 140 aa8.79□□□□□ -1
CPSF1-203ENST00000527916 OR8D4Q8NGM9 314 aa8.79□□□□□ -1
CPSF1-203ENST00000527916 SPTSSAQ969W0 71 aa8.79□□□□□ -1
CPSF1-203ENST00000527916 MAP6Q96JE9 813 aa8.79□□□□□ -1
CPSF1-203ENST00000527916 NMNAT2Q9BZQ4 307 aa8.79□□□□□ -1
CPSF1-203ENST00000527916 SLC22A4Q9H015 551 aa8.79□□□□□ -1
CPSF1-203ENST00000527916 FN3KQ9H479 309 aa8.79□□□□□ -1
CPSF1-203ENST00000527916 REEP1Q9H902 201 aa8.79□□□□□ -1
CPSF1-203ENST00000527916 TCF7L1Q9HCS4 588 aa8.79□□□□□ -1
CPSF1-203ENST00000527916 TAS2R1Q9NYW7 299 aa8.79□□□□□ -1
CPSF1-203ENST00000527916 C1RLQ9NZP8 487 aa8.79□□□□□ -1
CPSF1-203ENST00000527916 RNF114Q9Y508 228 aa8.79□□□□□ -1
CPSF1-203ENST00000527916 RYR3Q15413 4870 aa8.78□□□□□ -1
CPSF1-203ENST00000527916 ARRDC5A6NEK1 342 aa8.78□□□□□ -1
CPSF1-203ENST00000527916 H0YL77 283 aa8.78□□□□□ -1
CPSF1-203ENST00000527916 M0R135 149 aa8.78□□□□□ -1
CPSF1-203ENST00000527916 ACOT8O14734 319 aa8.78□□□□□ -1
CPSF1-203ENST00000527916 MLNRO43193 412 aa8.78□□□□□ -1
CPSF1-203ENST00000527916 TSPAN15O95858 294 aa8.78□□□□□ -1
CPSF1-203ENST00000527916 PLATP00750 562 aa8.78□□□□□ -1
CPSF1-203ENST00000527916 LCATP04180 440 aa8.78□□□□□ -1
CPSF1-203ENST00000527916 FMO3P31513 532 aa8.78□□□□□ -1
CPSF1-203ENST00000527916 PYCR1P32322 319 aa8.78□□□□□ -1
CPSF1-203ENST00000527916 CD80P33681 288 aa8.78□□□□□ -1
CPSF1-203ENST00000527916 MMP16P51512 607 aa8.78□□□□□ -1
CPSF1-203ENST00000527916 BPIFB3P59826 476 aa8.78□□□□□ -1
CPSF1-203ENST00000527916 C2orf68Q2NKX9 166 aa8.78□□□□□ -1
CPSF1-203ENST00000527916 LRRN1Q6UXK5 716 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms