RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 RPS8P62241 208 aaKnown RBP5.21□□□□□ -1.58
CD44-225ENST00000527326 RAB11AP62491 216 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 PPP2CBP62714 309 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 PPP2CAP67775 309 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 RBPJQ06330 500 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 CHIT1Q13231 466 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 CRMP1Q14194 572 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 GPR18Q14330 331 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 GPNMBQ14956 572 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 BATFQ16520 125 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 HYAL4Q2M3T9 481 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 LRRC37A5PQ49AS3 106 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 MIDNQ504T8 468 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 CT45A2Q5DJT8 189 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 FBXO47Q5MNV8 452 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 C9orf135Q5VTT2 229 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 DMKNQ6E0U4 476 aaPredicted RBP5.21□□□□□ -1.58
CD44-225ENST00000527326 FAAP20Q6NZ36 180 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 STEAP1BQ6NZ63 245 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 TMEM108Q6UXF1 575 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 UNQ9370/PRO34162Q6UXP9 181 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 CHST9Q7L1S5 443 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 COMMD6Q7Z4G1 85 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 C17orf64Q86WR6 236 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 TGIF2LYQ8IUE0 185 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 COX18Q8N8Q8 333 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 SLC38A9Q8NBW4 561 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 SLC26A10Q8NG04 563 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 OR8G5Q8NG78 346 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 OR9K2Q8NGE7 335 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 OR4D6Q8NGJ1 314 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 OR4D5Q8NGN0 318 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 SYNPRQ8TBG9 265 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 GPX8Q8TED1 209 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 MITD1Q8WV92 249 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 DNAJB3Q8WWF6 145 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 DNASE2BQ8WZ79 361 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 SMPDL3BQ92485 455 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 RGP1Q92546 391 aaPredicted RBP5.21□□□□□ -1.58
CD44-225ENST00000527326 MAL2Q969L2 176 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 HPDLQ96IR7 371 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 NKX3-1Q99801 234 aaPredicted RBP5.21□□□□□ -1.58
CD44-225ENST00000527326 SLC6A7Q99884 636 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 ZFYVE21Q9BQ24 234 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 G6PC3Q9BUM1 346 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 BOCQ9BWV1 1114 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 SCRT1Q9BWW7 348 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 ULBP1Q9BZM6 244 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 SLC5A7Q9GZV3 580 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 ZBP1Q9H171 429 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 SRD5A3Q9H8P0 318 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 ELL3Q9HB65 397 aaPredicted RBP5.21□□□□□ -1.58
CD44-225ENST00000527326 OSER1Q9NX31 292 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 FBXW11Q9UKB1 542 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 C19orf53Q9UNZ5 99 aaPredicted RBP5.21□□□□□ -1.58
CD44-225ENST00000527326 MRPS2Q9Y399 296 aaKnown RBP5.21□□□□□ -1.58
CD44-225ENST00000527326 OARD1Q9Y530 152 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 SIRT4Q9Y6E7 314 aaPredicted RBP5.21□□□□□ -1.58
CD44-225ENST00000527326 RALGAPA2Q2PPJ7 1873 aa5.21□□□□□ -1.58
CD44-225ENST00000527326 PDCD11Q14690 1871 aaKnown RBP5.2□□□□□ -1.58
CD44-225ENST00000527326 IGHV2OR16-5A0A0B4J2B6 119 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 OR51F1A6NGY5 319 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 ZNF705FA8MVS1 300 aaPredicted RBP5.2□□□□□ -1.58
CD44-225ENST00000527326 FTCDNL1E5RQL4 147 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 FAM227AF5H4B4 570 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 PRAMEF26H0Y7S4 382 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 H3BQ15 152 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 CLDN34H7C241 214 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 RNASET2O00584 256 aaKnown RBP5.2□□□□□ -1.58
CD44-225ENST00000527326 XKRYO14609 159 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 GEMIN2O14893 280 aaKnown RBP5.2□□□□□ -1.58
CD44-225ENST00000527326 FGF10O15520 208 aaPredicted RBP5.2□□□□□ -1.58
CD44-225ENST00000527326 FFAR2O15552 330 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 LDB2O43679 373 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 TOX4O94842 621 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 NDUFB8O95169 186 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 OR6A2O95222 327 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 LRATO95237 230 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 HLA-AP01891 365 aaKnown RBP5.2□□□□□ -1.58
CD44-225ENST00000527326 FGF1P05230 155 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 MMP7P09237 267 aaPredicted RBP5.2□□□□□ -1.58
CD44-225ENST00000527326 ZNF286BP0CG31 522 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 ZNF705DP0CH99 300 aaPredicted RBP5.2□□□□□ -1.58
CD44-225ENST00000527326 ZNF705BP0CI00 300 aaPredicted RBP5.2□□□□□ -1.58
CD44-225ENST00000527326 ALPPL2P10696 532 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 HOXB2P14652 356 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 ZNF7P17097 686 aaPredicted RBP5.2□□□□□ -1.58
CD44-225ENST00000527326 TNFSF4P23510 183 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 MMP11P24347 488 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 EDNRBP24530 442 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 CDK2P24941 298 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 FPR2P25090 351 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 S100A7P31151 101 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 PSMB10P40306 273 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 NSG1P42857 185 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 CEBPDP49716 269 aaPredicted RBP5.2□□□□□ -1.58
CD44-225ENST00000527326 COMPP49747 757 aaPredicted RBP5.2□□□□□ -1.58
CD44-225ENST00000527326 LIM2P55344 173 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 RHOGP84095 191 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 PNRC1Q12796 327 aaPredicted RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms