RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 ST6GALNAC2Q9UJ37 374 aa5.56□□□□□ -1.52
CD44-214ENST00000525211 IKZF2Q9UKS7 526 aa5.56□□□□□ -1.52
CD44-214ENST00000525211 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.56□□□□□ -1.52
CD44-214ENST00000525211 DIMT1Q9UNQ2 313 aaKnown RBP5.56□□□□□ -1.52
CD44-214ENST00000525211 LSM2Q9Y333 95 aaKnown RBP5.56□□□□□ -1.52
CD44-214ENST00000525211 RPL36Q9Y3U8 105 aaKnown RBP5.56□□□□□ -1.52
CD44-214ENST00000525211 RNF115Q9Y4L5 304 aa5.56□□□□□ -1.52
CD44-214ENST00000525211 USF3Q68DE3 2245 aa5.56□□□□□ -1.52
CD44-214ENST00000525211 LRBAP50851 2863 aa5.56□□□□□ -1.52
CD44-214ENST00000525211 LOC100289279A0A1B0GTE1 492 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 A0A1B0GTI1 187 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 PNMA8CA0A1B0GUJ8 204 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 TRIM64A6NGJ6 449 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 A6NIN4 97 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 METTL15A6NJ78 407 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 H0YL77 283 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 HS3ST1O14792 307 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 EIF4EBP3O60516 100 aaPredicted RBP5.55□□□□□ -1.52
CD44-214ENST00000525211 TTRP02766 147 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 LCATP04180 440 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 DANCRP0C864 163 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 SMIM18P0DKX4 95 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 PIPP12273 146 aaPredicted RBP5.55□□□□□ -1.52
CD44-214ENST00000525211 PCMT1P22061 227 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 PTAFRP25105 342 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 ACKR3P25106 362 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 ATP6V1E1P36543 226 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 ALDH3B1P43353 468 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 FABP6P51161 128 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 BLVRAP53004 296 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 PLP2Q04941 152 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 RAB40BQ12829 278 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 PSG7Q13046 419 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 TMED1Q13445 227 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 INSL4Q14641 139 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 TBC1D28Q2M2D7 210 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 WDR38Q5JTN6 314 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 DPPA2Q7Z7J5 298 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 CATSPERDQ86XM0 798 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 TGIF2LYQ8IUE0 185 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 ZNF679Q8IYX0 411 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 OR5AS1Q8N127 324 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 YIPF7Q8N8F6 280 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 OR1J1Q8NGS3 322 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 OR13C5Q8NGS8 318 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 IPCEF1Q8WWN9 437 aaPredicted RBP5.55□□□□□ -1.52
CD44-214ENST00000525211 DVL3Q92997 716 aaPredicted RBP5.55□□□□□ -1.52
CD44-214ENST00000525211 ORAI1Q96D31 301 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 CMBLQ96DG6 245 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 WDR89Q96FK6 387 aaPredicted RBP5.55□□□□□ -1.52
CD44-214ENST00000525211 TMEM80Q96HE8 168 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 Q96MT0 163 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 DCLRE1CQ96SD1 692 aaKnown RBP5.55□□□□□ -1.52
CD44-214ENST00000525211 JAM3Q9BX67 310 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 UBTD1Q9HAC8 227 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 CA10Q9NS85 328 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 CISD1Q9NZ45 108 aaKnown RBP5.55□□□□□ -1.52
CD44-214ENST00000525211 CNOT2Q9NZN8 540 aaKnown RBP5.55□□□□□ -1.52
CD44-214ENST00000525211 GNG8Q9UK08 70 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 ARFGEF3Q5TH69 2177 aa5.55□□□□□ -1.52
CD44-214ENST00000525211 IGHV3-64DA0A0J9YX35 117 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 EFCAB10A6NFE3 127 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 OR4C45A6NMZ5 311 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 P2RY10O00398 339 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 TBX1O43435 398 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 TMCC2O75069 709 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 LY6HO94772 140 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 FADS2O95864 444 aaKnown RBP5.54□□□□□ -1.52
CD44-214ENST00000525211 IGLV3-1P01715 115 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 CRYAAP02489 173 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 ANXA2P07355 339 aaKnown RBP5.54□□□□□ -1.52
CD44-214ENST00000525211 OR4A8P0C604 315 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 CCDC159P0C7I6 412 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 CD53P19397 219 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 SLC6A9P48067 706 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 RIDAP52758 137 aaKnown RBP5.54□□□□□ -1.52
CD44-214ENST00000525211 EGR3Q06889 387 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 MED21Q13503 144 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 GK2Q14410 553 aaPredicted RBP5.54□□□□□ -1.52
CD44-214ENST00000525211 TAF13Q15543 124 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 GFOD2Q3B7J2 385 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 KLHL22Q53GT1 634 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 RBM48Q5RL73 367 aaKnown RBP5.54□□□□□ -1.52
CD44-214ENST00000525211 ASPHD2Q6ICH7 369 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 OR2T2Q6IF00 324 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 REC114Q7Z4M0 266 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 TMEM200AQ86VY9 491 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 KLBQ86Z14 1044 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 SPARTQ8N0X7 666 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 STX19Q8N4C7 294 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 NANOGP1Q8N7R0 232 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 NUP37Q8NFH4 326 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 OR51A4Q8NGJ6 313 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 OR2G2Q8NGZ5 317 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 OR51E1Q8TCB6 317 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 RPS4Y2Q8TD47 263 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 KLF14Q8TD94 323 aaPredicted RBP5.54□□□□□ -1.52
CD44-214ENST00000525211 UBASH3BQ8TF42 649 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 ASB17Q8WXJ9 295 aa5.54□□□□□ -1.52
CD44-214ENST00000525211 C14orf79Q96F83 325 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms