RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 CKAP2Q8WWK9 683 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 OSTF1Q92882 214 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 ITFG2Q969R8 447 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 PLEKHA8Q96JA3 519 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 SAMD8Q96LT4 415 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 JSRP1Q96MG2 331 aaPredicted RBP1.16□□□□□ -2.22
CD44-212ENST00000524922 ZNF681Q96N22 645 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 SERPINB12Q96P63 405 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 ZIM3Q96PE6 472 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 STACQ99469 402 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 SERPINI1Q99574 410 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 NRTNQ99748 197 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 BPIFA3Q9BQP9 254 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 TM2D3Q9BRN9 247 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 FAIM2Q9BWQ8 316 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 ERVK-6Q9BXR3 956 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 PRRG4Q9BZD6 226 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 BCL2L14Q9BZR8 327 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 SLC19A3Q9BZV2 496 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 DERL2Q9GZP9 239 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 NMUR2Q9GZQ4 415 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 AICDAQ9GZX7 198 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 HAUS4Q9H6D7 363 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 MTHFD2LQ9H903 347 aaPredicted RBP1.16□□□□□ -2.22
CD44-212ENST00000524922 PATZ1Q9HBE1 687 aaKnown RBP1.16□□□□□ -2.22
CD44-212ENST00000524922 NOX3Q9HBY0 568 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 XAB2Q9HCS7 855 aaKnown RBP1.16□□□□□ -2.22
CD44-212ENST00000524922 PALMDQ9NP74 551 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 DYNLRB1Q9NP97 96 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 POLE3Q9NRF9 147 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 UBQLN4Q9NRR5 601 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 MED17Q9NVC6 651 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 NMRK1Q9NWW6 199 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 NSMCE4AQ9NXX6 385 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 AHSPQ9NZD4 102 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 MAT2BQ9NZL9 334 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 ZNRD1Q9P1U0 126 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 CPSF2Q9P2I0 782 aaKnown RBP1.16□□□□□ -2.22
CD44-212ENST00000524922 KAAG1Q9UBP8 84 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 ZNF69Q9UC07 566 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 MIOXQ9UGB7 285 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 ATPIF1Q9UII2 106 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 TRMT6Q9UJA5 497 aaKnown RBP1.16□□□□□ -2.22
CD44-212ENST00000524922 LEF1Q9UJU2 399 aaPredicted RBP1.16□□□□□ -2.22
CD44-212ENST00000524922 CES1P1Q9UKY3 287 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 TMCO1Q9UM00 188 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 CLEC4AQ9UMR7 237 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 ERVK-19Q9WJR5 959 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 TMED3Q9Y3Q3 217 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 OARD1Q9Y530 152 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 ASB4Q9Y574 426 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 HEY1Q9Y5J3 304 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 KPTNQ9Y664 436 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 IGHV1-18A0A0C4DH31 117 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 A0A0J9YW62 118 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 A0A1B0GVI7 797 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 A0A1W2PPQ1 181 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 CIB4A0PJX0 185 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 GMNCA6NCL1 334 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 NUPR2A6NF83 97 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 ZNF99A8MXY4 864 aaPredicted RBP1.15□□□□□ -2.23
CD44-212ENST00000524922 MIF4GDA9UHW6 222 aaKnown RBP1.15□□□□□ -2.23
CD44-212ENST00000524922 ZNF879B4DU55 563 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 B4DXG7 233 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 TRIM49D1C9J1S8 452 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 H3BNH8 94 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 M0QZK8 103 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 PLPP1O14494 284 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 ARPC2O15144 300 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 SURF4O15260 269 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 CXCL13O43927 109 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 ERAL1O75616 437 aaKnown RBP1.15□□□□□ -2.23
CD44-212ENST00000524922 STK16O75716 305 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 LYZL6O75951 148 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 UBL3O95164 117 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 WISP3O95389 354 aaPredicted RBP1.15□□□□□ -2.23
CD44-212ENST00000524922 PTBP3O95758 552 aaKnown RBP1.15□□□□□ -2.23
CD44-212ENST00000524922 ANGPTL1O95841 491 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 C6orf47O95873 294 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 CCDC159P0C7I6 412 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 FAM58BPP0C7Q3 252 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 CECR9P0C854 216 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 NR2C1P13056 603 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 ETS1P14921 441 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 ZNF14P17017 642 aaPredicted RBP1.15□□□□□ -2.23
CD44-212ENST00000524922 AZGP1P25311 298 aaKnown RBP1.15□□□□□ -2.23
CD44-212ENST00000524922 TIA1P31483 386 aaKnown RBP eCLIP1.15□□□□□ -2.23
CD44-212ENST00000524922 MPIP34949 423 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 RPL22P35268 128 aaKnown RBP1.15□□□□□ -2.23
CD44-212ENST00000524922 ARL3P36405 182 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 PSMB10P40306 273 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 GRIA1P42261 906 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 SSR2P43308 183 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 SLC15A1P46059 708 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 KCNJ1P48048 391 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 P2RX1P51575 399 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 XKP51811 444 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 STX17P56962 302 aa1.15□□□□□ -2.23
CD44-212ENST00000524922 UBE2NP61088 152 aaKnown RBP1.15□□□□□ -2.23
CD44-212ENST00000524922 BTG1P62324 171 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms