RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 C12orf10Q9HB07 376 aa11.71□□□□□ -0.53
PCDHGB1-201ENST00000523390 NGBQ9NPG2 151 aa11.71□□□□□ -0.53
PCDHGB1-201ENST00000523390 KLK11Q9UBX7 282 aa11.71□□□□□ -0.53
PCDHGB1-201ENST00000523390 PLEKHB1Q9UF11 243 aaPredicted RBP11.71□□□□□ -0.53
PCDHGB1-201ENST00000523390 PIGBOS1A0A0B4J2F0 54 aa11.71□□□□□ -0.54
PCDHGB1-201ENST00000523390 A0A1W2PQD3 144 aa11.71□□□□□ -0.54
PCDHGB1-201ENST00000523390 SDCBPO00560 298 aaPredicted RBP11.71□□□□□ -0.54
PCDHGB1-201ENST00000523390 ATG12O94817 140 aa11.71□□□□□ -0.54
PCDHGB1-201ENST00000523390 DCTDP32321 178 aa11.71□□□□□ -0.54
PCDHGB1-201ENST00000523390 MEOX1P50221 254 aa11.71□□□□□ -0.54
PCDHGB1-201ENST00000523390 POU4F3Q15319 338 aa11.71□□□□□ -0.54
PCDHGB1-201ENST00000523390 PHLDA2Q53GA4 152 aa11.71□□□□□ -0.54
PCDHGB1-201ENST00000523390 PAN3Q58A45 887 aaKnown RBP11.71□□□□□ -0.54
PCDHGB1-201ENST00000523390 MESTQ5EB52 335 aa11.71□□□□□ -0.54
PCDHGB1-201ENST00000523390 ZNF362Q5T0B9 420 aaPredicted RBP11.71□□□□□ -0.54
PCDHGB1-201ENST00000523390 NPEPL1Q8NDH3 523 aa11.71□□□□□ -0.54
PCDHGB1-201ENST00000523390 EIF5A2Q9GZV4 153 aaKnown RBP11.71□□□□□ -0.54
PCDHGB1-201ENST00000523390 ICAM5Q9UMF0 924 aa11.71□□□□□ -0.54
PCDHGB1-201ENST00000523390 COPS3Q9UNS2 423 aa11.71□□□□□ -0.54
PCDHGB1-201ENST00000523390 THSD7BQ9C0I4 1608 aa11.71□□□□□ -0.54
PCDHGB1-201ENST00000523390 DOCK4Q8N1I0 1966 aa11.71□□□□□ -0.54
PCDHGB1-201ENST00000523390 SPTAN1Q13813 2472 aaKnown RBP11.71□□□□□ -0.54
PCDHGB1-201ENST00000523390 TRAV17A0A0B4J275 112 aa11.7□□□□□ -0.54
PCDHGB1-201ENST00000523390 PATE4P0C8F1 98 aa11.7□□□□□ -0.54
PCDHGB1-201ENST00000523390 ZNF728P0DKX0 622 aa11.7□□□□□ -0.54
PCDHGB1-201ENST00000523390 INSM1Q01101 510 aaPredicted RBP11.7□□□□□ -0.54
PCDHGB1-201ENST00000523390 EDDM3AQ14507 147 aa11.7□□□□□ -0.54
PCDHGB1-201ENST00000523390 RDH5Q92781 318 aa11.7□□□□□ -0.54
PCDHGB1-201ENST00000523390 MCHR2Q969V1 340 aa11.7□□□□□ -0.54
PCDHGB1-201ENST00000523390 SNX18Q96RF0 628 aa11.7□□□□□ -0.54
PCDHGB1-201ENST00000523390 TSNAXQ99598 290 aaKnown RBP11.7□□□□□ -0.54
PCDHGB1-201ENST00000523390 ASF1BQ9NVP2 202 aa11.7□□□□□ -0.54
PCDHGB1-201ENST00000523390 FLVCR2Q9UPI3 526 aa11.7□□□□□ -0.54
PCDHGB1-201ENST00000523390 WNT11O96014 354 aa11.7□□□□□ -0.54
PCDHGB1-201ENST00000523390 SRD5A2P31213 254 aa11.7□□□□□ -0.54
PCDHGB1-201ENST00000523390 TMPRSS7Q7RTY8 843 aa11.7□□□□□ -0.54
PCDHGB1-201ENST00000523390 POM121CA8CG34 1229 aa11.7□□□□□ -0.54
PCDHGB1-201ENST00000523390 SLC17A2O00624 439 aa11.7□□□□□ -0.54
PCDHGB1-201ENST00000523390 HS3ST1O14792 307 aa11.7□□□□□ -0.54
PCDHGB1-201ENST00000523390 AGPAT2O15120 278 aa11.7□□□□□ -0.54
PCDHGB1-201ENST00000523390 ANGPTL7O43827 346 aa11.7□□□□□ -0.54
PCDHGB1-201ENST00000523390 AADACL3Q5VUY0 350 aa11.7□□□□□ -0.54
PCDHGB1-201ENST00000523390 RHOUQ7L0Q8 258 aa11.7□□□□□ -0.54
PCDHGB1-201ENST00000523390 GABRG1Q8N1C3 465 aa11.7□□□□□ -0.54
PCDHGB1-201ENST00000523390 RNF128Q8TEB7 428 aa11.7□□□□□ -0.54
PCDHGB1-201ENST00000523390 PTTG3PQ9NZH4 202 aa11.7□□□□□ -0.54
PCDHGB1-201ENST00000523390 MLXQ9UH92 298 aa11.7□□□□□ -0.54
PCDHGB1-201ENST00000523390 MED12Q93074 2177 aa11.7□□□□□ -0.54
PCDHGB1-201ENST00000523390 TNFSF12O43508 249 aa11.7□□□□□ -0.54
PCDHGB1-201ENST00000523390 EDDM3BP56851 147 aa11.7□□□□□ -0.54
PCDHGB1-201ENST00000523390 ERVK-16P61578 105 aa11.7□□□□□ -0.54
PCDHGB1-201ENST00000523390 ARF1P84077 181 aaKnown RBP11.7□□□□□ -0.54
PCDHGB1-201ENST00000523390 ZNF85Q03923 595 aa11.7□□□□□ -0.54
PCDHGB1-201ENST00000523390 GK2Q14410 553 aaPredicted RBP11.7□□□□□ -0.54
PCDHGB1-201ENST00000523390 SPATA46Q5T0L3 261 aa11.7□□□□□ -0.54
PCDHGB1-201ENST00000523390 SLC25A26Q70HW3 274 aa11.7□□□□□ -0.54
PCDHGB1-201ENST00000523390 PROCRQ9UNN8 238 aa11.7□□□□□ -0.54
PCDHGB1-201ENST00000523390 OR6C6A6NF89 314 aa11.69□□□□□ -0.54
PCDHGB1-201ENST00000523390 FIGNL2A6NMB9 653 aa11.69□□□□□ -0.54
PCDHGB1-201ENST00000523390 CCSO14618 274 aa11.69□□□□□ -0.54
PCDHGB1-201ENST00000523390 CD3DP04234 171 aa11.69□□□□□ -0.54
PCDHGB1-201ENST00000523390 CELA2AP08217 269 aa11.69□□□□□ -0.54
PCDHGB1-201ENST00000523390 SMIM10L1P0DMW3 83 aa11.69□□□□□ -0.54
PCDHGB1-201ENST00000523390 GNB3P16520 340 aa11.69□□□□□ -0.54
PCDHGB1-201ENST00000523390 PRKACAP17612 351 aa11.69□□□□□ -0.54
PCDHGB1-201ENST00000523390 ARR3P36575 388 aa11.69□□□□□ -0.54
PCDHGB1-201ENST00000523390 ZNF133P52736 654 aaPredicted RBP11.69□□□□□ -0.54
PCDHGB1-201ENST00000523390 UBE2MP61081 183 aaKnown RBP11.69□□□□□ -0.54
PCDHGB1-201ENST00000523390 GPR157Q5UAW9 335 aa11.69□□□□□ -0.54
PCDHGB1-201ENST00000523390 SMIM10Q96HG1 83 aa11.69□□□□□ -0.54
PCDHGB1-201ENST00000523390 FABP6P51161 128 aa11.69□□□□□ -0.54
PCDHGB1-201ENST00000523390 GUCA2AQ02747 115 aa11.69□□□□□ -0.54
PCDHGB1-201ENST00000523390 MAMSTRQ6ZN01 415 aa11.69□□□□□ -0.54
PCDHGB1-201ENST00000523390 COMMD7Q86VX2 200 aa11.69□□□□□ -0.54
PCDHGB1-201ENST00000523390 EXD3Q8N9H8 876 aa11.69□□□□□ -0.54
PCDHGB1-201ENST00000523390 KCNJ15Q99712 375 aa11.69□□□□□ -0.54
PCDHGB1-201ENST00000523390 PRSS27Q9BQR3 290 aa11.69□□□□□ -0.54
PCDHGB1-201ENST00000523390 NELFAQ9H3P2 528 aa11.69□□□□□ -0.54
PCDHGB1-201ENST00000523390 SCPEP1Q9HB40 452 aa11.69□□□□□ -0.54
PCDHGB1-201ENST00000523390 RPA2P15927 270 aa11.69□□□□□ -0.54
PCDHGB1-201ENST00000523390 PRSS12P56730 875 aa11.69□□□□□ -0.54
PCDHGB1-201ENST00000523390 BTG1P62324 171 aa11.69□□□□□ -0.54
PCDHGB1-201ENST00000523390 CLVS2Q5SYC1 327 aa11.69□□□□□ -0.54
PCDHGB1-201ENST00000523390 SAP25Q8TEE9 199 aa11.69□□□□□ -0.54
PCDHGB1-201ENST00000523390 ZNF416Q9BWM5 594 aa11.69□□□□□ -0.54
PCDHGB1-201ENST00000523390 HRASLSQ9HDD0 168 aa11.69□□□□□ -0.54
PCDHGB1-201ENST00000523390 CYSLTR2Q9NS75 346 aa11.69□□□□□ -0.54
PCDHGB1-201ENST00000523390 PCDHB10Q9UN67 800 aa11.69□□□□□ -0.54
PCDHGB1-201ENST00000523390 PI3P19957 117 aa11.69□□□□□ -0.54
PCDHGB1-201ENST00000523390 CDONQ4KMG0 1287 aa11.69□□□□□ -0.54
PCDHGB1-201ENST00000523390 OR11L1Q8NGX0 322 aa11.69□□□□□ -0.54
PCDHGB1-201ENST00000523390 OR1F12Q8NHA8 337 aa11.69□□□□□ -0.54
PCDHGB1-201ENST00000523390 PTDSS2Q9BVG9 487 aa11.69□□□□□ -0.54
PCDHGB1-201ENST00000523390 MRM2Q9UI43 246 aaKnown RBP11.69□□□□□ -0.54
PCDHGB1-201ENST00000523390 A0A1W2PPC1 479 aa11.68□□□□□ -0.54
PCDHGB1-201ENST00000523390 A0A1W2PQM1 296 aa11.68□□□□□ -0.54
PCDHGB1-201ENST00000523390 XRCC2O43543 280 aa11.68□□□□□ -0.54
PCDHGB1-201ENST00000523390 AVPR2P30518 371 aa11.68□□□□□ -0.54
PCDHGB1-201ENST00000523390 RAB1AP62820 205 aa11.68□□□□□ -0.54
PCDHGB1-201ENST00000523390 OR8G1Q15617 311 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms