RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 OR2AE1Q8NHA4 323 aa10.37□□□□□ -0.75
VEGFA-223ENST00000523125 ZNF418Q8TF45 676 aaPredicted RBP10.37□□□□□ -0.75
VEGFA-223ENST00000523125 ZFAND2BQ8WV99 257 aa10.37□□□□□ -0.75
VEGFA-223ENST00000523125 CANT1Q8WVQ1 401 aa10.37□□□□□ -0.75
VEGFA-223ENST00000523125 DVL3Q92997 716 aaPredicted RBP10.37□□□□□ -0.75
VEGFA-223ENST00000523125 SPTSSAQ969W0 71 aa10.37□□□□□ -0.75
VEGFA-223ENST00000523125 TMEM246Q9BRR3 403 aa10.37□□□□□ -0.75
VEGFA-223ENST00000523125 THTPAQ9BU02 230 aa10.37□□□□□ -0.75
VEGFA-223ENST00000523125 MED20Q9H944 212 aa10.37□□□□□ -0.75
VEGFA-223ENST00000523125 CMC2Q9NRP2 79 aa10.37□□□□□ -0.75
VEGFA-223ENST00000523125 INSIG2Q9Y5U4 225 aa10.37□□□□□ -0.75
VEGFA-223ENST00000523125 ARRDC5A6NEK1 342 aa10.36□□□□□ -0.75
VEGFA-223ENST00000523125 FAM183AA6NL82 134 aa10.36□□□□□ -0.75
VEGFA-223ENST00000523125 CD300LBA8K4G0 201 aa10.36□□□□□ -0.75
VEGFA-223ENST00000523125 CST1P01037 141 aa10.36□□□□□ -0.75
VEGFA-223ENST00000523125 SPARCP09486 303 aa10.36□□□□□ -0.75
VEGFA-223ENST00000523125 ZNF12P17014 697 aa10.36□□□□□ -0.75
VEGFA-223ENST00000523125 CA6P23280 308 aa10.36□□□□□ -0.75
VEGFA-223ENST00000523125 CD200P41217 278 aa10.36□□□□□ -0.75
VEGFA-223ENST00000523125 PRKXP51817 358 aa10.36□□□□□ -0.75
VEGFA-223ENST00000523125 ZNF154Q13106 437 aa10.36□□□□□ -0.75
VEGFA-223ENST00000523125 GK3PQ14409 553 aa10.36□□□□□ -0.75
VEGFA-223ENST00000523125 MPPED2Q15777 294 aa10.36□□□□□ -0.75
VEGFA-223ENST00000523125 GLYATL3Q5SZD4 288 aa10.36□□□□□ -0.75
VEGFA-223ENST00000523125 DRAM2Q6UX65 266 aa10.36□□□□□ -0.75
VEGFA-223ENST00000523125 MRPL21Q7Z2W9 205 aaKnown RBP10.36□□□□□ -0.75
VEGFA-223ENST00000523125 MUC20Q8N307 709 aaPredicted RBP10.36□□□□□ -0.75
VEGFA-223ENST00000523125 IQCF1Q8N6M8 205 aa10.36□□□□□ -0.75
VEGFA-223ENST00000523125 GIPC3Q8TF64 312 aa10.36□□□□□ -0.75
VEGFA-223ENST00000523125 SPRYD4Q8WW59 207 aaPredicted RBP10.36□□□□□ -0.75
VEGFA-223ENST00000523125 SLAMF6Q96DU3 332 aa10.36□□□□□ -0.75
VEGFA-223ENST00000523125 LRGUKQ96M69 825 aa10.36□□□□□ -0.75
VEGFA-223ENST00000523125 KCNJ15Q99712 375 aa10.36□□□□□ -0.75
VEGFA-223ENST00000523125 SLC6A7Q99884 636 aa10.36□□□□□ -0.75
VEGFA-223ENST00000523125 DHRS12A0PJE2 317 aa10.35□□□□□ -0.75
VEGFA-223ENST00000523125 AQP12BA6NM10 295 aa10.35□□□□□ -0.75
VEGFA-223ENST00000523125 RIIAD1A6NNX1 92 aa10.35□□□□□ -0.75
VEGFA-223ENST00000523125 PTBP3O95758 552 aaKnown RBP10.35□□□□□ -0.75
VEGFA-223ENST00000523125 IFNGP01579 166 aa10.35□□□□□ -0.75
VEGFA-223ENST00000523125 SLC2A1P11166 492 aa10.35□□□□□ -0.75
VEGFA-223ENST00000523125 ZNF3P17036 446 aa10.35□□□□□ -0.75
VEGFA-223ENST00000523125 CD80P33681 288 aa10.35□□□□□ -0.75
VEGFA-223ENST00000523125 GRK5P34947 590 aa10.35□□□□□ -0.75
VEGFA-223ENST00000523125 HOXA4Q00056 320 aaPredicted RBP10.35□□□□□ -0.75
VEGFA-223ENST00000523125 ZNF404Q494X3 552 aa10.35□□□□□ -0.75
VEGFA-223ENST00000523125 ESCO2Q56NI9 601 aa10.35□□□□□ -0.75
VEGFA-223ENST00000523125 KLF17Q5JT82 389 aaPredicted RBP10.35□□□□□ -0.75
VEGFA-223ENST00000523125 PRAMEF6Q5VXH4 476 aa10.35□□□□□ -0.75
VEGFA-223ENST00000523125 TRPM8Q7Z2W7 1104 aa10.35□□□□□ -0.75
VEGFA-223ENST00000523125 KLBQ86Z14 1044 aa10.35□□□□□ -0.75
VEGFA-223ENST00000523125 AQP12AQ8IXF9 295 aa10.35□□□□□ -0.75
VEGFA-223ENST00000523125 HS3ST5Q8IZT8 346 aa10.35□□□□□ -0.75
VEGFA-223ENST00000523125 OR6K6Q8NGW6 343 aa10.35□□□□□ -0.75
VEGFA-223ENST00000523125 Q8TCH9 128 aa10.35□□□□□ -0.75
VEGFA-223ENST00000523125 SPSB4Q96A44 273 aa10.35□□□□□ -0.75
VEGFA-223ENST00000523125 DACT3Q96B18 629 aaPredicted RBP10.35□□□□□ -0.75
VEGFA-223ENST00000523125 SLC7A6OSQ96CW6 309 aaPredicted RBP10.35□□□□□ -0.75
VEGFA-223ENST00000523125 COPS4Q9BT78 406 aa10.35□□□□□ -0.75
VEGFA-223ENST00000523125 MARCH7Q9H992 704 aa10.35□□□□□ -0.75
VEGFA-223ENST00000523125 ESM1Q9NQ30 184 aa10.35□□□□□ -0.75
VEGFA-223ENST00000523125 CENPMQ9NSP4 180 aa10.35□□□□□ -0.75
VEGFA-223ENST00000523125 MIOXQ9UGB7 285 aa10.35□□□□□ -0.75
VEGFA-223ENST00000523125 LRCH1Q9Y2L9 728 aa10.35□□□□□ -0.75
VEGFA-223ENST00000523125 LRRC30A6NM36 301 aa10.34□□□□□ -0.75
VEGFA-223ENST00000523125 ZNF878C9JN71 531 aa10.34□□□□□ -0.75
VEGFA-223ENST00000523125 GMDSO60547 372 aa10.34□□□□□ -0.75
VEGFA-223ENST00000523125 FAM20BO75063 409 aa10.34□□□□□ -0.75
VEGFA-223ENST00000523125 CPT2P23786 658 aa10.34□□□□□ -0.75
VEGFA-223ENST00000523125 BLVRAP53004 296 aa10.34□□□□□ -0.75
VEGFA-223ENST00000523125 PAX8Q06710 450 aa10.34□□□□□ -0.75
VEGFA-223ENST00000523125 OR8G1Q15617 311 aa10.34□□□□□ -0.75
VEGFA-223ENST00000523125 LYPD2Q6UXB3 125 aa10.34□□□□□ -0.75
VEGFA-223ENST00000523125 SPATC1Q76KD6 591 aa10.34□□□□□ -0.75
VEGFA-223ENST00000523125 PRSS45Q7RTY3 260 aa10.34□□□□□ -0.75
VEGFA-223ENST00000523125 DPY19L4Q7Z388 723 aa10.34□□□□□ -0.75
VEGFA-223ENST00000523125 TIGD4Q8IY51 512 aa10.34□□□□□ -0.75
VEGFA-223ENST00000523125 ZDHHC22Q8N966 263 aa10.34□□□□□ -0.75
VEGFA-223ENST00000523125 TEX47Q8TBZ9 253 aa10.34□□□□□ -0.75
VEGFA-223ENST00000523125 FAM216AQ8WUB2 273 aa10.34□□□□□ -0.75
VEGFA-223ENST00000523125 C22orf15Q8WYQ4 148 aa10.34□□□□□ -0.75
VEGFA-223ENST00000523125 ERGIC1Q969X5 290 aa10.34□□□□□ -0.75
VEGFA-223ENST00000523125 AMELYQ99218 206 aa10.34□□□□□ -0.75
VEGFA-223ENST00000523125 ABHD6Q9BV23 337 aa10.34□□□□□ -0.75
VEGFA-223ENST00000523125 SSBP3Q9BWW4 388 aaPredicted RBP10.34□□□□□ -0.75
VEGFA-223ENST00000523125 SUCNR1Q9BXA5 334 aa10.34□□□□□ -0.75
VEGFA-223ENST00000523125 UFSP2Q9NUQ7 469 aa10.34□□□□□ -0.75
VEGFA-223ENST00000523125 PDP1Q9P0J1 537 aaPredicted RBP10.34□□□□□ -0.75
VEGFA-223ENST00000523125 PPIAL4AQ9Y536 164 aa10.34□□□□□ -0.75
VEGFA-223ENST00000523125 AUP1Q9Y679 476 aa10.34□□□□□ -0.75
VEGFA-223ENST00000523125 NBEAL1Q6ZS30 2694 aa10.34□□□□□ -0.75
VEGFA-223ENST00000523125 TCRBV3S1A0A5B6 114 aa10.33□□□□□ -0.76
VEGFA-223ENST00000523125 GGT3PA6NGU5 568 aa10.33□□□□□ -0.76
VEGFA-223ENST00000523125 H3BN98 237 aa10.33□□□□□ -0.76
VEGFA-223ENST00000523125 GLCEO94923 617 aa10.33□□□□□ -0.76
VEGFA-223ENST00000523125 RPS2P15880 293 aaKnown RBP10.33□□□□□ -0.76
VEGFA-223ENST00000523125 PRKACGP22612 351 aa10.33□□□□□ -0.76
VEGFA-223ENST00000523125 GSTT1P30711 240 aa10.33□□□□□ -0.76
VEGFA-223ENST00000523125 CDK5Q00535 292 aa10.33□□□□□ -0.76
VEGFA-223ENST00000523125 EIF2B1Q14232 305 aaKnown RBP10.33□□□□□ -0.76
VEGFA-223ENST00000523125 GINS1Q14691 196 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms