RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 HPNP05981 417 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 PTGER4P35408 488 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 CRYBA2P53672 197 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 ZNF85Q03923 595 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 HNF4GQ14541 408 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 OR52W1Q6IF63 320 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 ADAM5Q6NVV9 412 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 OR2G3Q8NGZ4 309 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 PPP1R1CQ8WVI7 109 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 TSC2P49815 1807 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 H7C1Q1 480 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 SULT1A3P0DMM9 295 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 SULT1A4P0DMN0 295 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 AADACP22760 399 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 DUSP1P28562 367 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 PTCRAQ6ISU1 281 aaPredicted RBP12.47□□□□□ -0.41
SYNPO-205ENST00000522122 MRGPRX4Q96LA9 322 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 OXGR1Q96P68 337 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 UBL7Q96S82 380 aaPredicted RBP12.47□□□□□ -0.41
SYNPO-205ENST00000522122 SPACA1Q9HBV2 294 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 MMP25Q9NPA2 562 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 FLVCR1Q9Y5Y0 555 aa12.47□□□□□ -0.41
SYNPO-205ENST00000522122 MPPED1O15442 326 aa12.46□□□□□ -0.41
SYNPO-205ENST00000522122 TUSC2O75896 110 aa12.46□□□□□ -0.41
SYNPO-205ENST00000522122 NDUFB6O95139 128 aa12.46□□□□□ -0.41
SYNPO-205ENST00000522122 ZFPL1O95159 310 aa12.46□□□□□ -0.41
SYNPO-205ENST00000522122 HOXD11P31277 338 aaPredicted RBP12.46□□□□□ -0.41
SYNPO-205ENST00000522122 CD80P33681 288 aa12.46□□□□□ -0.41
SYNPO-205ENST00000522122 SLC25A1P53007 311 aa12.46□□□□□ -0.41
SYNPO-205ENST00000522122 BRICD5Q6PL45 260 aa12.46□□□□□ -0.41
SYNPO-205ENST00000522122 CD200R1LQ6Q8B3 271 aa12.46□□□□□ -0.41
SYNPO-205ENST00000522122 C17orf107Q6ZR85 190 aa12.46□□□□□ -0.41
SYNPO-205ENST00000522122 LYG2Q86SG7 212 aa12.46□□□□□ -0.41
SYNPO-205ENST00000522122 OR1S2Q8NGQ3 325 aa12.46□□□□□ -0.41
SYNPO-205ENST00000522122 SFT2D1Q8WV19 159 aa12.46□□□□□ -0.41
SYNPO-205ENST00000522122 C8orf44Q96CB5 159 aa12.46□□□□□ -0.41
SYNPO-205ENST00000522122 C17orf112F2Z3M2 114 aa12.46□□□□□ -0.41
SYNPO-205ENST00000522122 GSTP1P09211 210 aaKnown RBP12.46□□□□□ -0.41
SYNPO-205ENST00000522122 ABOP16442 354 aa12.46□□□□□ -0.41
SYNPO-205ENST00000522122 GALNT16Q8N428 558 aa12.46□□□□□ -0.41
SYNPO-205ENST00000522122 ZNF610Q8N9Z0 462 aa12.46□□□□□ -0.41
SYNPO-205ENST00000522122 TERB2Q8NHR7 220 aa12.46□□□□□ -0.41
SYNPO-205ENST00000522122 KTI12Q96EK9 354 aaPredicted RBP12.46□□□□□ -0.41
SYNPO-205ENST00000522122 C14orf79Q96F83 325 aa12.46□□□□□ -0.41
SYNPO-205ENST00000522122 PLEKHF2Q9H8W4 249 aa12.46□□□□□ -0.41
SYNPO-205ENST00000522122 HAO2Q9NYQ3 351 aa12.46□□□□□ -0.41
SYNPO-205ENST00000522122 ELF5Q9UKW6 265 aaPredicted RBP12.46□□□□□ -0.41
SYNPO-205ENST00000522122 IGHV3-9P01782 118 aa12.46□□□□□ -0.42
SYNPO-205ENST00000522122 OPRM1P35372 400 aa12.46□□□□□ -0.42
SYNPO-205ENST00000522122 GUCA2AQ02747 115 aa12.46□□□□□ -0.42
SYNPO-205ENST00000522122 PLGLAQ15195 96 aa12.46□□□□□ -0.42
SYNPO-205ENST00000522122 TRIM61Q5EBN2 209 aa12.46□□□□□ -0.42
SYNPO-205ENST00000522122 TFAP2EQ6VUC0 442 aa12.46□□□□□ -0.42
SYNPO-205ENST00000522122 OR51F2Q8NH61 342 aa12.46□□□□□ -0.42
SYNPO-205ENST00000522122 ST8SIA2Q92186 375 aa12.46□□□□□ -0.42
SYNPO-205ENST00000522122 SCMH1Q96GD3 660 aa12.46□□□□□ -0.42
SYNPO-205ENST00000522122 OR2A5Q96R48 311 aa12.46□□□□□ -0.42
SYNPO-205ENST00000522122 C7orf66A4D0T2 115 aa12.46□□□□□ -0.42
SYNPO-205ENST00000522122 ARGFXA6NJG6 315 aa12.46□□□□□ -0.42
SYNPO-205ENST00000522122 FCGR2CP31995 323 aa12.46□□□□□ -0.42
SYNPO-205ENST00000522122 TAGLN2P37802 199 aaKnown RBP12.46□□□□□ -0.42
SYNPO-205ENST00000522122 F2RL1P55085 397 aa12.46□□□□□ -0.42
SYNPO-205ENST00000522122 UBE2IP63279 158 aaKnown RBP12.46□□□□□ -0.42
SYNPO-205ENST00000522122 TAF9Q16594 264 aa12.46□□□□□ -0.42
SYNPO-205ENST00000522122 MRM1Q6IN84 353 aaKnown RBP12.46□□□□□ -0.42
SYNPO-205ENST00000522122 YRDCQ86U90 279 aaKnown RBP12.46□□□□□ -0.42
SYNPO-205ENST00000522122 BHLHE23Q8NDY6 225 aa12.46□□□□□ -0.42
SYNPO-205ENST00000522122 OR52H1Q8NGJ2 320 aa12.46□□□□□ -0.42
SYNPO-205ENST00000522122 MUCL1Q96DR8 90 aa12.46□□□□□ -0.42
SYNPO-205ENST00000522122 SPAG17Q6Q759 2223 aa12.46□□□□□ -0.42
SYNPO-205ENST00000522122 ERVH48-1M5A8F1 160 aa12.45□□□□□ -0.42
SYNPO-205ENST00000522122 CTXN2P0C2S0 81 aa12.45□□□□□ -0.42
SYNPO-205ENST00000522122 TBXA2RP21731 343 aa12.45□□□□□ -0.42
SYNPO-205ENST00000522122 SNCAP37840 140 aa12.45□□□□□ -0.42
SYNPO-205ENST00000522122 LYPD8Q6UX82 237 aa12.45□□□□□ -0.42
SYNPO-205ENST00000522122 THSD4Q6ZMP0 1018 aa12.45□□□□□ -0.42
SYNPO-205ENST00000522122 SAMD10Q9BYL1 202 aa12.45□□□□□ -0.42
SYNPO-205ENST00000522122 TIMM8AO60220 97 aaPredicted RBP12.45□□□□□ -0.42
SYNPO-205ENST00000522122 OR13C7P0DN81 318 aa12.45□□□□□ -0.42
SYNPO-205ENST00000522122 CBR1P16152 277 aa12.45□□□□□ -0.42
SYNPO-205ENST00000522122 PAN3Q58A45 887 aaKnown RBP12.45□□□□□ -0.42
SYNPO-205ENST00000522122 TMEM229BQ8NBD8 167 aa12.45□□□□□ -0.42
SYNPO-205ENST00000522122 KCNJ15Q99712 375 aa12.45□□□□□ -0.42
SYNPO-205ENST00000522122 GDF2Q9UK05 429 aaPredicted RBP12.45□□□□□ -0.42
SYNPO-205ENST00000522122 FBXL4Q9UKA2 621 aa12.45□□□□□ -0.42
SYNPO-205ENST00000522122 TIMM10BQ9Y5J6 103 aa12.45□□□□□ -0.42
SYNPO-205ENST00000522122 GLSO94925 669 aaPredicted RBP12.45□□□□□ -0.42
SYNPO-205ENST00000522122 BAXQ07812 192 aa12.45□□□□□ -0.42
SYNPO-205ENST00000522122 TOMM34Q15785 309 aaPredicted RBP12.45□□□□□ -0.42
SYNPO-205ENST00000522122 TCTN1Q2MV58 587 aa12.45□□□□□ -0.42
SYNPO-205ENST00000522122 CDONQ4KMG0 1287 aa12.45□□□□□ -0.42
SYNPO-205ENST00000522122 ZFP82Q8N141 532 aa12.45□□□□□ -0.42
SYNPO-205ENST00000522122 RAB39BQ96DA2 213 aa12.45□□□□□ -0.42
SYNPO-205ENST00000522122 LILRA5A6NI73 299 aa12.45□□□□□ -0.42
SYNPO-205ENST00000522122 ZNF354AO60765 605 aaPredicted RBP12.45□□□□□ -0.42
SYNPO-205ENST00000522122 H2AFB1P0C5Y9 115 aa12.45□□□□□ -0.42
SYNPO-205ENST00000522122 PTHLHP12272 177 aa12.45□□□□□ -0.42
SYNPO-205ENST00000522122 SHBQ15464 509 aa12.45□□□□□ -0.42
SYNPO-205ENST00000522122 OR51H1Q8NH63 302 aa12.45□□□□□ -0.42
SYNPO-205ENST00000522122 APH1AQ96BI3 265 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms