RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 GAL3ST4Q96RP7 486 aa4.48□□□□□ -1.69
SDC2-204ENST00000519914 ELF4Q99607 663 aaPredicted RBP4.48□□□□□ -1.69
SDC2-204ENST00000519914 C12orf57Q99622 126 aa4.48□□□□□ -1.69
SDC2-204ENST00000519914 ZNF251Q9BRH9 671 aa4.48□□□□□ -1.69
SDC2-204ENST00000519914 MRPL13Q9BYD1 178 aaKnown RBP4.48□□□□□ -1.69
SDC2-204ENST00000519914 OR10A4Q9H209 315 aa4.48□□□□□ -1.69
SDC2-204ENST00000519914 METTL17Q9H7H0 456 aaPredicted RBP4.48□□□□□ -1.69
SDC2-204ENST00000519914 UBE2ZQ9H832 354 aaPredicted RBP4.48□□□□□ -1.69
SDC2-204ENST00000519914 MOB1AQ9H8S9 216 aa4.48□□□□□ -1.69
SDC2-204ENST00000519914 APMAPQ9HDC9 416 aa4.48□□□□□ -1.69
SDC2-204ENST00000519914 CHST11Q9NPF2 352 aa4.48□□□□□ -1.69
SDC2-204ENST00000519914 UFSP2Q9NUQ7 469 aa4.48□□□□□ -1.69
SDC2-204ENST00000519914 ALKBH4Q9NXW9 302 aa4.48□□□□□ -1.69
SDC2-204ENST00000519914 DHCR7Q9UBM7 475 aaKnown RBP4.48□□□□□ -1.69
SDC2-204ENST00000519914 UPB1Q9UBR1 384 aa4.48□□□□□ -1.69
SDC2-204ENST00000519914 WNT16Q9UBV4 365 aa4.48□□□□□ -1.69
SDC2-204ENST00000519914 NDRG3Q9UGV2 375 aa4.48□□□□□ -1.69
SDC2-204ENST00000519914 UBQLN2Q9UHD9 624 aa4.48□□□□□ -1.69
SDC2-204ENST00000519914 OPN4Q9UHM6 478 aa4.48□□□□□ -1.69
SDC2-204ENST00000519914 ING1Q9UK53 422 aaPredicted RBP4.48□□□□□ -1.69
SDC2-204ENST00000519914 HHLA2Q9UM44 414 aa4.48□□□□□ -1.69
SDC2-204ENST00000519914 CLEC4AQ9UMR7 237 aa4.48□□□□□ -1.69
SDC2-204ENST00000519914 DHDHQ9UQ10 334 aa4.48□□□□□ -1.69
SDC2-204ENST00000519914 B3GALT5Q9Y2C3 310 aa4.48□□□□□ -1.69
SDC2-204ENST00000519914 LRP12Q9Y561 859 aa4.48□□□□□ -1.69
SDC2-204ENST00000519914 CABIN1Q9Y6J0 2220 aa4.48□□□□□ -1.69
SDC2-204ENST00000519914 PI4KAP42356 2102 aa4.48□□□□□ -1.69
SDC2-204ENST00000519914 KIAA1549Q9HCM3 1950 aa4.48□□□□□ -1.69
SDC2-204ENST00000519914 ASCC3Q8N3C0 2202 aaKnown RBP4.48□□□□□ -1.69
SDC2-204ENST00000519914 CCDC163A0A0D9SF12 145 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 LY6G6EA0A0G2JKS1 128 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 A0A1B0GTI1 187 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 LOC107986453A0A1B0GWG9 222 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 UBE2QL1A1L167 161 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 MCRIP1C9JLW8 97 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 C11orf98E9PRG8 122 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 PYCARD-AS1I3L0S3 204 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 K7ESF4 209 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 ZNF354AO60765 605 aaPredicted RBP4.47□□□□□ -1.69
SDC2-204ENST00000519914 ALOX12BO75342 701 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 OR6A2O95222 327 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 PMS2P2O95744 297 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 GPANK1O95872 356 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 CD8AP01732 235 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 MAS1P04201 325 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 GLI4P10075 376 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 RRASP10301 218 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 TBPP20226 339 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 CCL1P22362 96 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 HTR2CP28335 458 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 CCKBRP32239 447 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 MEOX2P50222 304 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 EFNB2P52799 333 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 ADAM8P78325 824 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 HSF1Q00613 529 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 MFGE8Q08431 387 aaPredicted RBP4.47□□□□□ -1.69
SDC2-204ENST00000519914 EXOSC2Q13868 293 aaKnown RBP4.47□□□□□ -1.69
SDC2-204ENST00000519914 EIF2B1Q14232 305 aaKnown RBP4.47□□□□□ -1.69
SDC2-204ENST00000519914 OPCMLQ14982 345 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 HIST3H3Q16695 136 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 PCGF3Q3KNV8 242 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 RNASE12Q5GAN4 147 aaKnown RBP4.47□□□□□ -1.69
SDC2-204ENST00000519914 THEM4Q5T1C6 240 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 RAB12Q6IQ22 244 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 STEAP1BQ6NZ63 245 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 LPCAT3Q6P1A2 487 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 TMEM65Q6PI78 240 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 ZNF813Q6ZN06 617 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 FOXL2NBQ6ZUU3 175 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 LANCL3Q6ZV70 420 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 NDUFAF7Q7L592 441 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 TMPRSS9Q7Z410 1059 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 GABRG1Q8N1C3 465 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 EIF4E3Q8N5X7 224 aaKnown RBP4.47□□□□□ -1.69
SDC2-204ENST00000519914 FADS6Q8N9I5 356 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 ZNF248Q8NDW4 579 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 BEST4Q8NFU0 473 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 OR2AK2Q8NG84 335 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 OR5L2Q8NGL0 311 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 RNASE11Q8TAA1 199 aaKnown RBP4.47□□□□□ -1.69
SDC2-204ENST00000519914 POC1BQ8TC44 478 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 STT3BQ8TCJ2 826 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 SSC4DQ8WTU2 575 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 CCDC107Q8WV48 283 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 TSEN15Q8WW01 171 aaKnown RBP4.47□□□□□ -1.69
SDC2-204ENST00000519914 ATOH1Q92858 354 aaPredicted RBP4.47□□□□□ -1.69
SDC2-204ENST00000519914 GCDHQ92947 438 aaPredicted RBP4.47□□□□□ -1.69
SDC2-204ENST00000519914 ZBTB8AQ96BR9 441 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 SEH1LQ96EE3 360 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 SHDQ96IW2 340 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 SYT3Q9BQG1 590 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 SEC22CQ9BRL7 303 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 GINS4Q9BRT9 223 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 PRO3102Q9H379 93 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 CDCP1Q9H5V8 836 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 CA10Q9NS85 328 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 FGF21Q9NSA1 209 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 HPF1Q9NWY4 346 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 FAM206AQ9NX38 181 aa4.47□□□□□ -1.69
SDC2-204ENST00000519914 TAS2R4Q9NYW5 299 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms