RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 MROQ9BYG7 248 aa10.11□□□□□ -0.79
HPS4-218ENST00000519774 CHD3Q12873 2000 aaKnown RBP10.11□□□□□ -0.79
HPS4-218ENST00000519774 SNTNA6NMZ2 147 aa10.1□□□□□ -0.79
HPS4-218ENST00000519774 XRCC2O43543 280 aa10.1□□□□□ -0.79
HPS4-218ENST00000519774 DAOP14920 347 aa10.1□□□□□ -0.79
HPS4-218ENST00000519774 SELEP16581 610 aa10.1□□□□□ -0.79
HPS4-218ENST00000519774 CAPGP40121 348 aa10.1□□□□□ -0.79
HPS4-218ENST00000519774 MMP15P51511 669 aa10.1□□□□□ -0.79
HPS4-218ENST00000519774 RIDAP52758 137 aaKnown RBP10.1□□□□□ -0.79
HPS4-218ENST00000519774 ADARB1P78563 741 aaKnown RBP10.1□□□□□ -0.79
HPS4-218ENST00000519774 ZNF92Q03936 586 aa10.1□□□□□ -0.79
HPS4-218ENST00000519774 TSTQ16762 297 aaKnown RBP10.1□□□□□ -0.79
HPS4-218ENST00000519774 TIGD6Q17RP2 521 aa10.1□□□□□ -0.79
HPS4-218ENST00000519774 ZNF691Q5VV52 312 aa10.1□□□□□ -0.79
HPS4-218ENST00000519774 PLEKHG7Q6ZR37 379 aa10.1□□□□□ -0.79
HPS4-218ENST00000519774 RHOUQ7L0Q8 258 aa10.1□□□□□ -0.79
HPS4-218ENST00000519774 SSX6Q7RTT6 188 aa10.1□□□□□ -0.79
HPS4-218ENST00000519774 ZNF679Q8IYX0 411 aa10.1□□□□□ -0.79
HPS4-218ENST00000519774 SETD9Q8NE22 299 aa10.1□□□□□ -0.79
HPS4-218ENST00000519774 CNIH3Q8TBE1 160 aa10.1□□□□□ -0.79
HPS4-218ENST00000519774 APH1BQ8WW43 257 aa10.1□□□□□ -0.79
HPS4-218ENST00000519774 FAM168AQ92567 244 aa10.1□□□□□ -0.79
HPS4-218ENST00000519774 Q96MT0 163 aa10.1□□□□□ -0.79
HPS4-218ENST00000519774 OR10A2Q9H208 303 aa10.1□□□□□ -0.79
HPS4-218ENST00000519774 NIPAL2Q9H841 368 aa10.1□□□□□ -0.79
HPS4-218ENST00000519774 SP140LQ9H930 580 aa10.1□□□□□ -0.79
HPS4-218ENST00000519774 AMBNQ9NP70 447 aa10.1□□□□□ -0.79
HPS4-218ENST00000519774 CYSLTR2Q9NS75 346 aa10.1□□□□□ -0.79
HPS4-218ENST00000519774 CGGBP1Q9UFW8 167 aaPredicted RBP10.1□□□□□ -0.79
HPS4-218ENST00000519774 GTF2A1LQ9UNN4 478 aa10.1□□□□□ -0.79
HPS4-218ENST00000519774 AKAP9Q99996 3911 aa10.1□□□□□ -0.79
HPS4-218ENST00000519774 ITPR3Q14573 2671 aa10.1□□□□□ -0.79
HPS4-218ENST00000519774 A0A1W2PQL4 384 aaPredicted RBP10.09□□□□□ -0.79
HPS4-218ENST00000519774 GGT3PA6NGU5 568 aa10.09□□□□□ -0.79
HPS4-218ENST00000519774 LYNX1G3V0Z9 82 aa10.09□□□□□ -0.79
HPS4-218ENST00000519774 ATP6V1G2O95670 118 aa10.09□□□□□ -0.79
HPS4-218ENST00000519774 IGHV1-46P01743 117 aa10.09□□□□□ -0.79
HPS4-218ENST00000519774 HPXP02790 462 aa10.09□□□□□ -0.79
HPS4-218ENST00000519774 KRT8P05787 483 aa10.09□□□□□ -0.79
HPS4-218ENST00000519774 CSF3P09919 207 aa10.09□□□□□ -0.79
HPS4-218ENST00000519774 OR2T7P0C7T2 308 aa10.09□□□□□ -0.79
HPS4-218ENST00000519774 LYNX1P0DP58 116 aa10.09□□□□□ -0.79
HPS4-218ENST00000519774 DBTP11182 482 aaKnown RBP10.09□□□□□ -0.79
HPS4-218ENST00000519774 LIPAP38571 399 aa10.09□□□□□ -0.79
HPS4-218ENST00000519774 PDLIM4P50479 330 aa10.09□□□□□ -0.79
HPS4-218ENST00000519774 AQP4P55087 323 aa10.09□□□□□ -0.79
HPS4-218ENST00000519774 ROM1Q03395 351 aa10.09□□□□□ -0.79
HPS4-218ENST00000519774 MFGE8Q08431 387 aaPredicted RBP10.09□□□□□ -0.79
HPS4-218ENST00000519774 TNK1Q13470 666 aa10.09□□□□□ -0.79
HPS4-218ENST00000519774 SMN1Q16637 294 aaKnown RBP10.09□□□□□ -0.79
HPS4-218ENST00000519774 ZNF829Q3KNS6 432 aaPredicted RBP10.09□□□□□ -0.79
HPS4-218ENST00000519774 PCGF3Q3KNV8 242 aa10.09□□□□□ -0.79
HPS4-218ENST00000519774 DEGS2Q6QHC5 323 aa10.09□□□□□ -0.79
HPS4-218ENST00000519774 Q6ZR03 302 aa10.09□□□□□ -0.79
HPS4-218ENST00000519774 YIPF7Q8N8F6 280 aa10.09□□□□□ -0.79
HPS4-218ENST00000519774 OR8G5Q8NG78 346 aa10.09□□□□□ -0.79
HPS4-218ENST00000519774 OR52H1Q8NGJ2 320 aa10.09□□□□□ -0.79
HPS4-218ENST00000519774 OR2T27Q8NH04 317 aa10.09□□□□□ -0.79
HPS4-218ENST00000519774 UBASH3BQ8TF42 649 aa10.09□□□□□ -0.79
HPS4-218ENST00000519774 SPRYD4Q8WW59 207 aaPredicted RBP10.09□□□□□ -0.79
HPS4-218ENST00000519774 LGALS12Q96DT0 336 aa10.09□□□□□ -0.79
HPS4-218ENST00000519774 ELMOD3Q96FG2 381 aa10.09□□□□□ -0.79
HPS4-218ENST00000519774 REEP6Q96HR9 211 aa10.09□□□□□ -0.79
HPS4-218ENST00000519774 RHNO1Q9BSD3 238 aa10.09□□□□□ -0.79
HPS4-218ENST00000519774 DECR2Q9NUI1 292 aa10.09□□□□□ -0.79
HPS4-218ENST00000519774 MRM2Q9UI43 246 aaKnown RBP10.09□□□□□ -0.79
HPS4-218ENST00000519774 IGHV4-30-2A0A087WSY4 118 aa10.08□□□□□ -0.8
HPS4-218ENST00000519774 TMEM269A0A1B0GVZ9 245 aa10.08□□□□□ -0.8
HPS4-218ENST00000519774 DAPL1A0PJW8 107 aa10.08□□□□□ -0.8
HPS4-218ENST00000519774 IQCF6A8MYZ5 107 aa10.08□□□□□ -0.8
HPS4-218ENST00000519774 RNF223E7ERA6 249 aa10.08□□□□□ -0.8
HPS4-218ENST00000519774 H0YAE9 185 aa10.08□□□□□ -0.8
HPS4-218ENST00000519774 H7C1Q1 480 aa10.08□□□□□ -0.8
HPS4-218ENST00000519774 SMAD7O15105 426 aaKnown RBP10.08□□□□□ -0.8
HPS4-218ENST00000519774 CDC14BO60729 498 aa10.08□□□□□ -0.8
HPS4-218ENST00000519774 LILRA1O75019 489 aa10.08□□□□□ -0.8
HPS4-218ENST00000519774 ZNF254O75437 659 aa10.08□□□□□ -0.8
HPS4-218ENST00000519774 WBP4O75554 376 aaKnown RBP10.08□□□□□ -0.8
HPS4-218ENST00000519774 RPP14O95059 124 aaKnown RBP10.08□□□□□ -0.8
HPS4-218ENST00000519774 GNAO1P09471 354 aa10.08□□□□□ -0.8
HPS4-218ENST00000519774 CD99P14209 185 aa10.08□□□□□ -0.8
HPS4-218ENST00000519774 ACTC1P68032 377 aa10.08□□□□□ -0.8
HPS4-218ENST00000519774 ACTA1P68133 377 aa10.08□□□□□ -0.8
HPS4-218ENST00000519774 TNFAIP6P98066 277 aaPredicted RBP10.08□□□□□ -0.8
HPS4-218ENST00000519774 ZNF85Q03923 595 aa10.08□□□□□ -0.8
HPS4-218ENST00000519774 EGR3Q06889 387 aa10.08□□□□□ -0.8
HPS4-218ENST00000519774 IL18R1Q13478 541 aa10.08□□□□□ -0.8
HPS4-218ENST00000519774 PRSS45Q7RTY3 260 aa10.08□□□□□ -0.8
HPS4-218ENST00000519774 C8orf59Q8N0T1 100 aaPredicted RBP10.08□□□□□ -0.8
HPS4-218ENST00000519774 OR2Z1Q8NG97 314 aa10.08□□□□□ -0.8
HPS4-218ENST00000519774 OR10AD1Q8NGE0 317 aa10.08□□□□□ -0.8
HPS4-218ENST00000519774 OR8B12Q8NGG6 310 aa10.08□□□□□ -0.8
HPS4-218ENST00000519774 OR56B2PQ8NGI1 322 aa10.08□□□□□ -0.8
HPS4-218ENST00000519774 PIMREGQ9BSJ6 248 aa10.08□□□□□ -0.8
HPS4-218ENST00000519774 VCX3BQ9H321 246 aa10.08□□□□□ -0.8
HPS4-218ENST00000519774 OPA3Q9H6K4 179 aa10.08□□□□□ -0.8
HPS4-218ENST00000519774 SAP30LQ9HAJ7 183 aa10.08□□□□□ -0.8
HPS4-218ENST00000519774 MYOZ1Q9NP98 299 aaPredicted RBP10.08□□□□□ -0.8
HPS4-218ENST00000519774 FAM206AQ9NX38 181 aa10.08□□□□□ -0.8
HPS4-218ENST00000519774 ZNF319Q9P2F9 582 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms