RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 COL8A2P25067 703 aa18.69■□□□□ 0.58
VEGFA-217ENST00000518538 PEX2P28328 305 aa18.69■□□□□ 0.58
VEGFA-217ENST00000518538 ROM1Q03395 351 aa18.69■□□□□ 0.58
VEGFA-217ENST00000518538 ZNF92Q03936 586 aa18.69■□□□□ 0.58
VEGFA-217ENST00000518538 LOXL1Q08397 574 aaPredicted RBP18.69■□□□□ 0.58
VEGFA-217ENST00000518538 RIN1Q13671 783 aa18.69■□□□□ 0.58
VEGFA-217ENST00000518538 MEDAGQ5VYS4 303 aa18.69■□□□□ 0.58
VEGFA-217ENST00000518538 USP51Q70EK9 711 aa18.69■□□□□ 0.58
VEGFA-217ENST00000518538 GALNT4Q8N4A0 578 aa18.69■□□□□ 0.58
VEGFA-217ENST00000518538 PACRGLQ8N7B6 248 aa18.69■□□□□ 0.58
VEGFA-217ENST00000518538 MAPK1IP1LQ8NDC0 245 aa18.69■□□□□ 0.58
VEGFA-217ENST00000518538 OR52H1Q8NGJ2 320 aa18.69■□□□□ 0.58
VEGFA-217ENST00000518538 OR2AE1Q8NHA4 323 aa18.69■□□□□ 0.58
VEGFA-217ENST00000518538 YIPF5Q969M3 257 aa18.69■□□□□ 0.58
VEGFA-217ENST00000518538 OR8B4Q96RC9 309 aa18.69■□□□□ 0.58
VEGFA-217ENST00000518538 REPIN1Q9BWE0 567 aaKnown RBP18.69■□□□□ 0.58
VEGFA-217ENST00000518538 MROQ9BYG7 248 aa18.69■□□□□ 0.58
VEGFA-217ENST00000518538 BPESC1Q9GZL8 116 aa18.69■□□□□ 0.58
VEGFA-217ENST00000518538 EGLN1Q9GZT9 426 aa18.69■□□□□ 0.58
VEGFA-217ENST00000518538 DCLRE1BQ9H816 532 aa18.69■□□□□ 0.58
VEGFA-217ENST00000518538 CHD3Q12873 2000 aaKnown RBP18.69■□□□□ 0.58
VEGFA-217ENST00000518538 ZNF469Q96JG9 3925 aaPredicted RBP18.68■□□□□ 0.58
VEGFA-217ENST00000518538 IGHV1-69-2A0A0G2JMI3 117 aa18.68■□□□□ 0.58
VEGFA-217ENST00000518538 DLGAP1O14490 977 aa18.68■□□□□ 0.58
VEGFA-217ENST00000518538 SLC16A6O15403 523 aa18.68■□□□□ 0.58
VEGFA-217ENST00000518538 TBX1O43435 398 aa18.68■□□□□ 0.58
VEGFA-217ENST00000518538 ZNF254O75437 659 aa18.68■□□□□ 0.58
VEGFA-217ENST00000518538 RP2O75695 350 aa18.68■□□□□ 0.58
VEGFA-217ENST00000518538 TNFSF4P23510 183 aa18.68■□□□□ 0.58
VEGFA-217ENST00000518538 CRYBB2P43320 205 aa18.68■□□□□ 0.58
VEGFA-217ENST00000518538 PRSS12P56730 875 aa18.68■□□□□ 0.58
VEGFA-217ENST00000518538 PSMA6P60900 246 aaKnown RBP18.68■□□□□ 0.58
VEGFA-217ENST00000518538 TNFAIP6P98066 277 aaPredicted RBP18.68■□□□□ 0.58
VEGFA-217ENST00000518538 OCLNQ16625 522 aa18.68■□□□□ 0.58
VEGFA-217ENST00000518538 FAM57BQ71RH2 274 aa18.68■□□□□ 0.58
VEGFA-217ENST00000518538 BHLHE23Q8NDY6 225 aa18.68■□□□□ 0.58
VEGFA-217ENST00000518538 OR2Z1Q8NG97 314 aa18.68■□□□□ 0.58
VEGFA-217ENST00000518538 OR13G1Q8NGZ3 307 aa18.68■□□□□ 0.58
VEGFA-217ENST00000518538 SPSB4Q96A44 273 aa18.68■□□□□ 0.58
VEGFA-217ENST00000518538 ELMOD3Q96FG2 381 aa18.68■□□□□ 0.58
VEGFA-217ENST00000518538 SMR3AQ99954 134 aa18.68■□□□□ 0.58
VEGFA-217ENST00000518538 SLC30A2Q9BRI3 323 aa18.68■□□□□ 0.58
VEGFA-217ENST00000518538 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.68■□□□□ 0.583e-7■■□□□ 12.6
VEGFA-217ENST00000518538 PRR32B1ATL7 298 aa18.67■□□□□ 0.58
VEGFA-217ENST00000518538 ZNF670-ZNF695F2Z2N8 137 aa18.67■□□□□ 0.58
VEGFA-217ENST00000518538 CASQ2O14958 399 aaPredicted RBP18.67■□□□□ 0.58
VEGFA-217ENST00000518538 MPZL2O60487 215 aa18.67■□□□□ 0.58
VEGFA-217ENST00000518538 LILRA1O75019 489 aa18.67■□□□□ 0.58
VEGFA-217ENST00000518538 ENTPD6O75354 484 aa18.67■□□□□ 0.58
VEGFA-217ENST00000518538 USF1P22415 310 aaPredicted RBP18.67■□□□□ 0.58
VEGFA-217ENST00000518538 DCTDP32321 178 aa18.67■□□□□ 0.58
VEGFA-217ENST00000518538 CXCR4P61073 352 aa18.67■□□□□ 0.58
VEGFA-217ENST00000518538 ENTHD1Q8IYW4 607 aa18.67■□□□□ 0.58
VEGFA-217ENST00000518538 ZNF679Q8IYX0 411 aa18.67■□□□□ 0.58
VEGFA-217ENST00000518538 RFLNBQ8N5W9 214 aa18.67■□□□□ 0.58
VEGFA-217ENST00000518538 ZNF555Q8NEP9 628 aa18.67■□□□□ 0.58
VEGFA-217ENST00000518538 OR10A2Q9H208 303 aa18.67■□□□□ 0.58
VEGFA-217ENST00000518538 GSX1Q9H4S2 264 aaPredicted RBP18.67■□□□□ 0.58
VEGFA-217ENST00000518538 BRD7Q9NPI1 651 aa18.67■□□□□ 0.58
VEGFA-217ENST00000518538 ZNF275Q9NSD4 429 aaPredicted RBP18.67■□□□□ 0.58
VEGFA-217ENST00000518538 A0A1B0GWJ7 208 aa18.66■□□□□ 0.58
VEGFA-217ENST00000518538 GGT3PA6NGU5 568 aa18.66■□□□□ 0.58
VEGFA-217ENST00000518538 CD300LBA8K4G0 201 aa18.66■□□□□ 0.58
VEGFA-217ENST00000518538 PSMD9O00233 223 aa18.66■□□□□ 0.58
VEGFA-217ENST00000518538 CDC14BO60729 498 aa18.66■□□□□ 0.58
VEGFA-217ENST00000518538 GABRB1P18505 474 aa18.66■□□□□ 0.58
VEGFA-217ENST00000518538 ATP6V1E1P36543 226 aa18.66■□□□□ 0.58
VEGFA-217ENST00000518538 TMEM33P57088 247 aa18.66■□□□□ 0.58
VEGFA-217ENST00000518538 TIGD6Q17RP2 521 aa18.66■□□□□ 0.58
VEGFA-217ENST00000518538 OGFRL1Q5TC84 451 aaPredicted RBP18.66■□□□□ 0.58
VEGFA-217ENST00000518538 ZNF322Q6U7Q0 402 aaPredicted RBP18.66■□□□□ 0.58
VEGFA-217ENST00000518538 SPRYD4Q8WW59 207 aaPredicted RBP18.66■□□□□ 0.58
VEGFA-217ENST00000518538 PGAM5Q96HS1 289 aa18.66■□□□□ 0.58
VEGFA-217ENST00000518538 TTTY10Q9BZA0 68 aa18.66■□□□□ 0.58
VEGFA-217ENST00000518538 RGCCQ9H4X1 137 aa18.66■□□□□ 0.58
VEGFA-217ENST00000518538 TMEM100Q9NV29 134 aa18.66■□□□□ 0.58
VEGFA-217ENST00000518538 ZNF319Q9P2F9 582 aa18.66■□□□□ 0.58
VEGFA-217ENST00000518538 IL19Q9UHD0 177 aa18.66■□□□□ 0.58
VEGFA-217ENST00000518538 IKZF2Q9UKS7 526 aa18.66■□□□□ 0.58
VEGFA-217ENST00000518538 SNTNA6NMZ2 147 aa18.65■□□□□ 0.58
VEGFA-217ENST00000518538 APOL3O95236 402 aa18.65■□□□□ 0.58
VEGFA-217ENST00000518538 OR2T7P0C7T2 308 aa18.65■□□□□ 0.58
VEGFA-217ENST00000518538 CFL1P23528 166 aaKnown RBP18.65■□□□□ 0.58
VEGFA-217ENST00000518538 MTNR1AP48039 350 aa18.65■□□□□ 0.58
VEGFA-217ENST00000518538 RIDAP52758 137 aaKnown RBP18.65■□□□□ 0.58
VEGFA-217ENST00000518538 EGR3Q06889 387 aa18.65■□□□□ 0.58
VEGFA-217ENST00000518538 CLEC9AQ6UXN8 241 aa18.65■□□□□ 0.58
VEGFA-217ENST00000518538 OR10AD1Q8NGE0 317 aa18.65■□□□□ 0.58
VEGFA-217ENST00000518538 OR2T27Q8NH04 317 aa18.65■□□□□ 0.58
VEGFA-217ENST00000518538 RHOXF1Q8NHV9 184 aa18.65■□□□□ 0.58
VEGFA-217ENST00000518538 SGK3Q96BR1 496 aa18.65■□□□□ 0.58
VEGFA-217ENST00000518538 REEP6Q96HR9 211 aa18.65■□□□□ 0.58
VEGFA-217ENST00000518538 ACANP16112 2415 aa18.65■□□□□ 0.58
VEGFA-217ENST00000518538 IGHV4-61A0A0C4DH41 118 aa18.64■□□□□ 0.57
VEGFA-217ENST00000518538 ACOD1A6NK06 481 aa18.64■□□□□ 0.57
VEGFA-217ENST00000518538 MLNRO43193 412 aa18.64■□□□□ 0.57
VEGFA-217ENST00000518538 LY6G6DO95868 133 aa18.64■□□□□ 0.57
VEGFA-217ENST00000518538 TNFRSF1AP19438 455 aa18.64■□□□□ 0.57
VEGFA-217ENST00000518538 GPR6P46095 362 aaPredicted RBP18.64■□□□□ 0.57
VEGFA-217ENST00000518538 HFEQ30201 348 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms