RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 ZNF337Q9Y3M9 751 aa3.19□□□□□ -1.9
RNU4-60P-201ENST00000517239 TNRQ92752 1358 aa3.19□□□□□ -1.9
RNU4-60P-201ENST00000517239 CAMSAP1Q5T5Y3 1602 aa3.19□□□□□ -1.9
RNU4-60P-201ENST00000517239 ABCC11Q96J66 1382 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 IGHV3OR16-12A0A075B7B8 117 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 IGHV2OR16-5A0A0B4J2B6 119 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 TINCRA0A1B0GVN0 87 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 GNG14A0A1W2PPG7 69 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 ZNF726A6NNF4 738 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 EFCAB9A8MZ26 197 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 SMIM1B2RUZ4 78 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 K7EQG2 157 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 M0R1B8 84 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 FABP7O15540 132 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 RAD1O60671 282 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 ENTPD6O75354 484 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 GATBO75879 557 aaKnown RBP3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 CD74P04233 296 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 IFNA16P05015 189 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 EIF4EP06730 217 aaKnown RBP3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 PGA5P0DJD9 388 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 C8orf88P0DMB2 117 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 VDAC1P21796 283 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 ME2P23368 584 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 MAGEA12P43365 314 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 INHBCP55103 352 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 NDUFV3P56181 108 aaKnown RBP3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 OR12D2P58182 307 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 PPP1CBP62140 327 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 SNRPD1P62314 119 aaKnown RBP3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 RANP62826 216 aaKnown RBP3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 SRPXP78539 464 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 S100A12P80511 92 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 IL5RAQ01344 420 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 TMEM30BQ3MIR4 351 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 TMEM176BQ3YBM2 270 aaPredicted RBP3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 TFDP3Q5H9I0 405 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 KLF17Q5JT82 389 aaPredicted RBP3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 OR2T5Q6IEZ7 315 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 PWWP2BQ6NUJ5 590 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 LRRN1Q6UXK5 716 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 FAM92BQ6ZTR7 304 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 PRSS58Q8IYP2 241 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 RDH10Q8IZV5 341 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 RFLNBQ8N5W9 214 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 OR4K17Q8NGC6 315 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 OR2A12Q8NGT7 310 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 OR2T29Q8NH02 315 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 AGAP11Q8TF27 550 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 SDR42E1Q8WUS8 393 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 FGF14Q92915 247 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 RAB8BQ92930 207 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 TMEM230Q96A57 120 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 NTAN1Q96AB6 310 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 ANKRD9Q96BM1 317 aaPredicted RBP3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 ZMYND19Q96E35 227 aaPredicted RBP3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 MRAP2Q96G30 205 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 Q96MT0 163 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 NOL4LQ96MY1 436 aaPredicted RBP3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 RILPQ96NA2 401 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 DHRS9Q9BPW9 319 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 TRABDQ9H4I3 376 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 ZNF71Q9NQZ8 489 aaPredicted RBP3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 FBXO6Q9NRD1 293 aaPredicted RBP3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 FAM206AQ9NX38 181 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 TREM2Q9NZC2 230 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 UBIAD1Q9Y5Z9 338 aa3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 MTCL1Q9Y4B5 1905 aaKnown RBP3.18□□□□□ -1.9
RNU4-60P-201ENST00000517239 PCF11O94913 1555 aaKnown RBP3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 IGKV1D-13A0A0B4J2D9 117 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 A0A1W2PRG6 482 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 ZNF233A6NK53 670 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 H7C1H1 209 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 K7ENP7 123 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 TNFRSF11BO00300 401 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 ZNF593O00488 134 aaPredicted RBP3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 SYNGR1O43759 233 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 CNIH1O95406 144 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 CTDNEP1O95476 244 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 CLDN1O95832 211 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 CRYAAP02489 173 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 PCCAP05165 728 aaPredicted RBP3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 BCHEP06276 602 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 CD48P09326 243 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 PGA4P0DJD7 388 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 PGA3P0DJD8 388 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 IGKV1-13P0DP09 117 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 THRAP10827 490 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 CD37P11049 281 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 UCHL3P15374 230 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 PSMA1P25786 263 aaKnown RBP3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 HTR1DP28221 377 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 ALDH3A1P30838 453 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 SERPINB5P36952 375 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 CD79BP40259 229 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 NR4A2P43354 598 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 KIR2DS2P43631 304 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 SLCO1A2P46721 670 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 RIDAP52758 137 aaKnown RBP3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 ERVPABLB-1P60509 514 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms