RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 SPRYD4Q8WW59 207 aaPredicted RBP9.69□□□□□ -0.86
VCAN-212ENST00000515397 TMEM186Q96B77 213 aa9.69□□□□□ -0.86
VCAN-212ENST00000515397 SLC30A2Q9BRI3 323 aa9.69□□□□□ -0.86
VCAN-212ENST00000515397 SEMA6AQ9H2E6 1030 aa9.69□□□□□ -0.86
VCAN-212ENST00000515397 PPP1R3EQ9H7J1 279 aa9.69□□□□□ -0.86
VCAN-212ENST00000515397 GCM1Q9NP62 436 aa9.69□□□□□ -0.86
VCAN-212ENST00000515397 TUBG2Q9NRH3 451 aa9.69□□□□□ -0.86
VCAN-212ENST00000515397 PAPOLBQ9NRJ5 636 aaKnown RBP9.69□□□□□ -0.86
VCAN-212ENST00000515397 DDX28Q9NUL7 540 aaKnown RBP9.69□□□□□ -0.86
VCAN-212ENST00000515397 UFSP2Q9NUQ7 469 aa9.69□□□□□ -0.86
VCAN-212ENST00000515397 CGGBP1Q9UFW8 167 aaPredicted RBP9.69□□□□□ -0.86
VCAN-212ENST00000515397 IL19Q9UHD0 177 aa9.69□□□□□ -0.86
VCAN-212ENST00000515397 KLHDC2Q9Y2U9 406 aa9.69□□□□□ -0.86
VCAN-212ENST00000515397 AP4S1Q9Y587 144 aa9.69□□□□□ -0.86
VCAN-212ENST00000515397 NPTNQ9Y639 398 aa9.69□□□□□ -0.86
VCAN-212ENST00000515397 STAB1Q9NY15 2570 aa9.69□□□□□ -0.86
VCAN-212ENST00000515397 GGT3PA6NGU5 568 aa9.68□□□□□ -0.86
VCAN-212ENST00000515397 CD300LBA8K4G0 201 aa9.68□□□□□ -0.86
VCAN-212ENST00000515397 PSMD9O00233 223 aa9.68□□□□□ -0.86
VCAN-212ENST00000515397 ATP5HO75947 161 aa9.68□□□□□ -0.86
VCAN-212ENST00000515397 IGHV2-70P01814 119 aa9.68□□□□□ -0.86
VCAN-212ENST00000515397 HMGN1P05114 100 aa9.68□□□□□ -0.86
VCAN-212ENST00000515397 ANXA2P07355 339 aaKnown RBP9.68□□□□□ -0.86
VCAN-212ENST00000515397 MRPL3P09001 348 aaKnown RBP9.68□□□□□ -0.86
VCAN-212ENST00000515397 TNFRSF1AP19438 455 aa9.68□□□□□ -0.86
VCAN-212ENST00000515397 OTX1P32242 354 aaPredicted RBP9.68□□□□□ -0.86
VCAN-212ENST00000515397 CRISP1P54107 249 aa9.68□□□□□ -0.86
VCAN-212ENST00000515397 DVL1P1P54792 670 aaPredicted RBP9.68□□□□□ -0.86
VCAN-212ENST00000515397 SEC61A1P61619 476 aaKnown RBP9.68□□□□□ -0.86
VCAN-212ENST00000515397 MAB21L1Q13394 359 aa9.68□□□□□ -0.86
VCAN-212ENST00000515397 APOFQ13790 326 aa9.68□□□□□ -0.86
VCAN-212ENST00000515397 GK3PQ14409 553 aa9.68□□□□□ -0.86
VCAN-212ENST00000515397 ZMYND11Q15326 602 aa9.68□□□□□ -0.86
VCAN-212ENST00000515397 MPPED2Q15777 294 aa9.68□□□□□ -0.86
VCAN-212ENST00000515397 GFOD2Q3B7J2 385 aa9.68□□□□□ -0.86
VCAN-212ENST00000515397 TEX30Q5JUR7 227 aa9.68□□□□□ -0.86
VCAN-212ENST00000515397 FAHD1Q6P587 224 aa9.68□□□□□ -0.86
VCAN-212ENST00000515397 C1orf229Q6ZS94 237 aaPredicted RBP9.68□□□□□ -0.86
VCAN-212ENST00000515397 FAM57BQ71RH2 274 aa9.68□□□□□ -0.86
VCAN-212ENST00000515397 GLCCI1Q86VQ1 547 aa9.68□□□□□ -0.86
VCAN-212ENST00000515397 OR51F2Q8NH61 342 aa9.68□□□□□ -0.86
VCAN-212ENST00000515397 OR5K1Q8NHB7 308 aa9.68□□□□□ -0.86
VCAN-212ENST00000515397 PLEKHA8Q96JA3 519 aa9.68□□□□□ -0.86
VCAN-212ENST00000515397 SIGLEC11Q96RL6 698 aa9.68□□□□□ -0.86
VCAN-212ENST00000515397 KCNJ15Q99712 375 aa9.68□□□□□ -0.86
VCAN-212ENST00000515397 TTTY10Q9BZA0 68 aa9.68□□□□□ -0.86
VCAN-212ENST00000515397 ZNF319Q9P2F9 582 aa9.68□□□□□ -0.86
VCAN-212ENST00000515397 LPAR3Q9UBY5 353 aa9.68□□□□□ -0.86
VCAN-212ENST00000515397 PCDHB10Q9UN67 800 aa9.68□□□□□ -0.86
VCAN-212ENST00000515397 LOC105371242A0A075B767 164 aa9.67□□□□□ -0.86
VCAN-212ENST00000515397 RNF212BA8MTL3 300 aa9.67□□□□□ -0.86
VCAN-212ENST00000515397 C3orf80F5H4A9 247 aa9.67□□□□□ -0.86
VCAN-212ENST00000515397 TMEM178BH3BS89 294 aa9.67□□□□□ -0.86
VCAN-212ENST00000515397 J3QW42 95 aa9.67□□□□□ -0.86
VCAN-212ENST00000515397 PHF1O43189 567 aaPredicted RBP9.67□□□□□ -0.86
VCAN-212ENST00000515397 PRKYO43930 277 aa9.67□□□□□ -0.86
VCAN-212ENST00000515397 ADRA2CP18825 462 aa9.67□□□□□ -0.86
VCAN-212ENST00000515397 HNF1AP20823 631 aa9.67□□□□□ -0.86
VCAN-212ENST00000515397 PAICSP22234 425 aaKnown RBP9.67□□□□□ -0.86
VCAN-212ENST00000515397 HSD11B1P28845 292 aa9.67□□□□□ -0.86
VCAN-212ENST00000515397 POLR2IP36954 125 aaKnown RBP9.67□□□□□ -0.86
VCAN-212ENST00000515397 CX3CR1P49238 355 aa9.67□□□□□ -0.86
VCAN-212ENST00000515397 MMP16P51512 607 aa9.67□□□□□ -0.86
VCAN-212ENST00000515397 ZNF121P58317 390 aaPredicted RBP9.67□□□□□ -0.86
VCAN-212ENST00000515397 SLC3A1Q07837 685 aa9.67□□□□□ -0.86
VCAN-212ENST00000515397 PTGES3Q15185 160 aaKnown RBP9.67□□□□□ -0.86
VCAN-212ENST00000515397 OR8G1Q15617 311 aa9.67□□□□□ -0.86
VCAN-212ENST00000515397 ATP6AP1Q15904 470 aa9.67□□□□□ -0.86
VCAN-212ENST00000515397 DRAM2Q6UX65 266 aa9.67□□□□□ -0.86
VCAN-212ENST00000515397 CXXC5Q7LFL8 322 aaKnown RBP9.67□□□□□ -0.86
VCAN-212ENST00000515397 PEG10Q86TG7 708 aaKnown RBP9.67□□□□□ -0.86
VCAN-212ENST00000515397 BOLLQ8N9W6 283 aaKnown RBP9.67□□□□□ -0.86
VCAN-212ENST00000515397 DEFB108BQ8NET1 73 aa9.67□□□□□ -0.86
VCAN-212ENST00000515397 OR56B2PQ8NGI1 322 aa9.67□□□□□ -0.86
VCAN-212ENST00000515397 PYDC1Q8WXC3 89 aa9.67□□□□□ -0.86
VCAN-212ENST00000515397 SGK3Q96BR1 496 aa9.67□□□□□ -0.86
VCAN-212ENST00000515397 REPIN1Q9BWE0 567 aaKnown RBP9.67□□□□□ -0.86
VCAN-212ENST00000515397 SAC3D1A6NKF1 404 aa9.66□□□□□ -0.86
VCAN-212ENST00000515397 ZNF878C9JN71 531 aa9.66□□□□□ -0.86
VCAN-212ENST00000515397 G3V2T6 193 aa9.66□□□□□ -0.86
VCAN-212ENST00000515397 MAGEB4O15481 346 aaPredicted RBP9.66□□□□□ -0.86
VCAN-212ENST00000515397 CIB2O75838 187 aa9.66□□□□□ -0.86
VCAN-212ENST00000515397 GRPP07492 148 aa9.66□□□□□ -0.86
VCAN-212ENST00000515397 H2BFMP0C1H6 154 aa9.66□□□□□ -0.86
VCAN-212ENST00000515397 HOXB6P17509 224 aaKnown RBP9.66□□□□□ -0.86
VCAN-212ENST00000515397 FASP25445 335 aa9.66□□□□□ -0.86
VCAN-212ENST00000515397 OPRL1P41146 370 aa9.66□□□□□ -0.86
VCAN-212ENST00000515397 SRP9P49458 86 aaKnown RBP9.66□□□□□ -0.86
VCAN-212ENST00000515397 BTG1P62324 171 aa9.66□□□□□ -0.86
VCAN-212ENST00000515397 LRRN1Q6UXK5 716 aa9.66□□□□□ -0.86
VCAN-212ENST00000515397 SHFQ7M4L6 423 aa9.66□□□□□ -0.86
VCAN-212ENST00000515397 LRRC28Q86X40 367 aaPredicted RBP9.66□□□□□ -0.86
VCAN-212ENST00000515397 RNF133Q8WVZ7 376 aa9.66□□□□□ -0.86
VCAN-212ENST00000515397 RAB39BQ96DA2 213 aa9.66□□□□□ -0.86
VCAN-212ENST00000515397 NRBF2Q96F24 287 aa9.66□□□□□ -0.86
VCAN-212ENST00000515397 METTL17Q9H7H0 456 aaPredicted RBP9.66□□□□□ -0.86
VCAN-212ENST00000515397 MARCH7Q9H992 704 aa9.66□□□□□ -0.86
VCAN-212ENST00000515397 TMEM165Q9HC07 324 aa9.66□□□□□ -0.86
VCAN-212ENST00000515397 SLC25A19Q9HC21 320 aa9.66□□□□□ -0.86
VCAN-212ENST00000515397 G6PC2Q9NQR9 355 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms