RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 SCGB2A2Q13296 93 aa20.62■□□□□ 0.89
SNF8-213ENST00000514929 EIF2B1Q14232 305 aaKnown RBP20.62■□□□□ 0.89
SNF8-213ENST00000514929 MOGAT3Q86VF5 341 aa20.62■□□□□ 0.89
SNF8-213ENST00000514929 ERI1Q8IV48 349 aaKnown RBP20.62■□□□□ 0.89
SNF8-213ENST00000514929 OR6N2Q8NGY6 317 aa20.62■□□□□ 0.89
SNF8-213ENST00000514929 INTS14Q96SY0 518 aa20.62■□□□□ 0.89
SNF8-213ENST00000514929 OR51V1Q9H2C8 321 aa20.62■□□□□ 0.89
SNF8-213ENST00000514929 OCEL1Q9H607 264 aa20.62■□□□□ 0.89
SNF8-213ENST00000514929 PATZ1Q9HBE1 687 aaKnown RBP20.62■□□□□ 0.89
SNF8-213ENST00000514929 A0A1B0GWJ7 208 aa20.61■□□□□ 0.89
SNF8-213ENST00000514929 J3QLI3 93 aa20.61■□□□□ 0.89
SNF8-213ENST00000514929 GLCEO94923 617 aa20.61■□□□□ 0.89
SNF8-213ENST00000514929 ANXA8P13928 327 aa20.61■□□□□ 0.89
SNF8-213ENST00000514929 GATA3P23771 443 aa20.61■□□□□ 0.89
SNF8-213ENST00000514929 MDH2P40926 338 aaKnown RBP20.61■□□□□ 0.89
SNF8-213ENST00000514929 SLC15A1P46059 708 aa20.61■□□□□ 0.89
SNF8-213ENST00000514929 RAD23AP54725 363 aa20.61■□□□□ 0.89
SNF8-213ENST00000514929 ZNF92Q03936 586 aa20.61■□□□□ 0.89
SNF8-213ENST00000514929 GLYATL3Q5SZD4 288 aa20.61■□□□□ 0.89
SNF8-213ENST00000514929 DPY19L4Q7Z388 723 aa20.61■□□□□ 0.89
SNF8-213ENST00000514929 MUC20Q8N307 709 aaPredicted RBP20.61■□□□□ 0.89
SNF8-213ENST00000514929 PAPD5Q8NDF8 572 aaKnown RBP20.61■□□□□ 0.89
SNF8-213ENST00000514929 OR2AE1Q8NHA4 323 aa20.61■□□□□ 0.89
SNF8-213ENST00000514929 CADM1Q9BY67 442 aaKnown RBP20.61■□□□□ 0.89
SNF8-213ENST00000514929 TMPRSS13Q9BYE2 586 aa20.61■□□□□ 0.89
SNF8-213ENST00000514929 LOC105371242A0A075B767 164 aa20.6■□□□□ 0.89
SNF8-213ENST00000514929 GGT3PA6NGU5 568 aa20.6■□□□□ 0.89
SNF8-213ENST00000514929 LRRC30A6NM36 301 aa20.6■□□□□ 0.89
SNF8-213ENST00000514929 CD300LBA8K4G0 201 aa20.6■□□□□ 0.89
SNF8-213ENST00000514929 PRR23D1E9PI22 279 aaPredicted RBP20.6■□□□□ 0.89
SNF8-213ENST00000514929 CYB5R3P00387 301 aaPredicted RBP20.6■□□□□ 0.89
SNF8-213ENST00000514929 AVPP01185 164 aa20.6■□□□□ 0.89
SNF8-213ENST00000514929 HMGN1P05114 100 aa20.6■□□□□ 0.89
SNF8-213ENST00000514929 PRR23D2P0DMB1 279 aaPredicted RBP20.6■□□□□ 0.89
SNF8-213ENST00000514929 SLC2A1P11166 492 aa20.6■□□□□ 0.89
SNF8-213ENST00000514929 GRB2P62993 217 aaKnown RBP20.6■□□□□ 0.89
SNF8-213ENST00000514929 BNIP1Q12981 228 aa20.6■□□□□ 0.89
SNF8-213ENST00000514929 NOP16Q9Y3C1 178 aaKnown RBP20.6■□□□□ 0.89
SNF8-213ENST00000514929 C5orf63A6NC05 138 aa20.59■□□□□ 0.89
SNF8-213ENST00000514929 CA6P23280 308 aa20.59■□□□□ 0.89
SNF8-213ENST00000514929 HSD11B1P28845 292 aa20.59■□□□□ 0.89
SNF8-213ENST00000514929 OR8G1Q15617 311 aa20.59■□□□□ 0.89
SNF8-213ENST00000514929 PLBD1Q6P4A8 553 aa20.59■□□□□ 0.89
SNF8-213ENST00000514929 C1orf229Q6ZS94 237 aaPredicted RBP20.59■□□□□ 0.89
SNF8-213ENST00000514929 SHFQ7M4L6 423 aa20.59■□□□□ 0.89
SNF8-213ENST00000514929 C1orf87Q8N0U7 546 aa20.59■□□□□ 0.89
SNF8-213ENST00000514929 ABHD6Q9BV23 337 aa20.59■□□□□ 0.89
SNF8-213ENST00000514929 REPIN1Q9BWE0 567 aaKnown RBP20.59■□□□□ 0.89
SNF8-213ENST00000514929 SLC22A4Q9H015 551 aa20.59■□□□□ 0.89
SNF8-213ENST00000514929 C7orf69Q9H7B7 122 aa20.59■□□□□ 0.89
SNF8-213ENST00000514929 ZNF205O95201 554 aa20.58■□□□□ 0.89
SNF8-213ENST00000514929 IRF2P14316 349 aa20.58■□□□□ 0.89
SNF8-213ENST00000514929 ANOS1P23352 680 aa20.58■□□□□ 0.89
SNF8-213ENST00000514929 ZFP36P26651 326 aaKnown RBP20.58■□□□□ 0.89
SNF8-213ENST00000514929 CX3CR1P49238 355 aa20.58■□□□□ 0.89
SNF8-213ENST00000514929 RASSF2P50749 326 aa20.58■□□□□ 0.89
SNF8-213ENST00000514929 MAB21L1Q13394 359 aa20.58■□□□□ 0.89
SNF8-213ENST00000514929 ZNF181Q2M3W8 571 aa20.58■□□□□ 0.89
SNF8-213ENST00000514929 KLHL12Q53G59 568 aa20.58■□□□□ 0.89
SNF8-213ENST00000514929 CELF2-AS1Q8N7Q2 184 aa20.58■□□□□ 0.89
SNF8-213ENST00000514929 ZMYND19Q96E35 227 aaPredicted RBP20.58■□□□□ 0.89
SNF8-213ENST00000514929 PLEKHA8Q96JA3 519 aa20.58■□□□□ 0.89
SNF8-213ENST00000514929 ADAT1Q9BUB4 502 aaKnown RBP20.58■□□□□ 0.89
SNF8-213ENST00000514929 C19orf24Q9BVV8 132 aa20.58■□□□□ 0.89
SNF8-213ENST00000514929 TEX12Q9BXU0 123 aa20.58■□□□□ 0.89
SNF8-213ENST00000514929 TOR3AQ9H497 397 aa20.58■□□□□ 0.89
SNF8-213ENST00000514929 OPA3Q9H6K4 179 aa20.58■□□□□ 0.89
SNF8-213ENST00000514929 MARCH7Q9H992 704 aa20.58■□□□□ 0.89
SNF8-213ENST00000514929 KIF17Q9P2E2 1029 aa20.58■□□□□ 0.89
SNF8-213ENST00000514929 CEACAM18A8MTB9 384 aa20.57■□□□□ 0.88
SNF8-213ENST00000514929 TBX1O43435 398 aa20.57■□□□□ 0.88
SNF8-213ENST00000514929 XRCC2O43543 280 aa20.57■□□□□ 0.88
SNF8-213ENST00000514929 TIPRLO75663 272 aa20.57■□□□□ 0.88
SNF8-213ENST00000514929 APOC1P02654 83 aa20.57■□□□□ 0.88
SNF8-213ENST00000514929 ANXA2P07355 339 aaKnown RBP20.57■□□□□ 0.88
SNF8-213ENST00000514929 CD200P41217 278 aa20.57■□□□□ 0.88
SNF8-213ENST00000514929 GATA4P43694 442 aa20.57■□□□□ 0.88
SNF8-213ENST00000514929 SEC61A1P61619 476 aaKnown RBP20.57■□□□□ 0.88
SNF8-213ENST00000514929 CDK5Q00535 292 aa20.57■□□□□ 0.88
SNF8-213ENST00000514929 ESCO2Q56NI9 601 aa20.57■□□□□ 0.88
SNF8-213ENST00000514929 OR11L1Q8NGX0 322 aa20.57■□□□□ 0.88
SNF8-213ENST00000514929 RNF133Q8WVZ7 376 aa20.57■□□□□ 0.88
SNF8-213ENST00000514929 ERGIC1Q969X5 290 aa20.57■□□□□ 0.88
SNF8-213ENST00000514929 SP140LQ9H930 580 aa20.57■□□□□ 0.88
SNF8-213ENST00000514929 PPIAL4EA0A075B759 164 aa20.56■□□□□ 0.88
SNF8-213ENST00000514929 PPIAL4CA0A0B4J2A2 164 aa20.56■□□□□ 0.88
SNF8-213ENST00000514929 F5H0A9 414 aaPredicted RBP20.56■□□□□ 0.88
SNF8-213ENST00000514929 PPIAL4DF5H284 164 aa20.56■□□□□ 0.88
SNF8-213ENST00000514929 PPIAL4FP0DN26 164 aa20.56■□□□□ 0.88
SNF8-213ENST00000514929 ADRA2CP18825 462 aa20.56■□□□□ 0.88
SNF8-213ENST00000514929 PMELP40967 661 aa20.56■□□□□ 0.88
SNF8-213ENST00000514929 PRAMEF6Q5VXH4 476 aa20.56■□□□□ 0.88
SNF8-213ENST00000514929 TMEM236Q5W0B7 351 aa20.56■□□□□ 0.88
SNF8-213ENST00000514929 C1QL2Q7Z5L3 287 aa20.56■□□□□ 0.88
SNF8-213ENST00000514929 CPOQ8IVL8 374 aa20.56■□□□□ 0.88
SNF8-213ENST00000514929 TIGD4Q8IY51 512 aa20.56■□□□□ 0.88
SNF8-213ENST00000514929 NANPQ8TBE9 248 aa20.56■□□□□ 0.88
SNF8-213ENST00000514929 DNAJC9Q8WXX5 260 aa20.56■□□□□ 0.88
SNF8-213ENST00000514929 NRBF2Q96F24 287 aa20.56■□□□□ 0.88
SNF8-213ENST00000514929 NTN4Q9HB63 628 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms