RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 H7C0C1 242 aa2.76□□□□□ -1.97
HMGCS1-207ENST00000514610 M0R3G1 203 aa2.76□□□□□ -1.97
HMGCS1-207ENST00000514610 CDC40O60508 579 aaKnown RBP eCLIP2.76□□□□□ -1.97
HMGCS1-207ENST00000514610 FGFR1OPO95684 399 aaKnown RBP2.76□□□□□ -1.97
HMGCS1-207ENST00000514610 IGLV3-25P01717 112 aa2.76□□□□□ -1.97
HMGCS1-207ENST00000514610 HLA-HP01893 362 aa2.76□□□□□ -1.97
HMGCS1-207ENST00000514610 IFNW1P05000 195 aa2.76□□□□□ -1.97
HMGCS1-207ENST00000514610 ANXA8P13928 327 aa2.76□□□□□ -1.97
HMGCS1-207ENST00000514610 TNFSF9P41273 254 aa2.76□□□□□ -1.97
HMGCS1-207ENST00000514610 ATP5OP48047 213 aa2.76□□□□□ -1.97
HMGCS1-207ENST00000514610 RAB7AP51149 207 aa2.76□□□□□ -1.97
HMGCS1-207ENST00000514610 NCF4Q15080 339 aa2.76□□□□□ -1.97
HMGCS1-207ENST00000514610 ANXA8L1Q5VT79 327 aa2.76□□□□□ -1.97
HMGCS1-207ENST00000514610 SLC25A34Q6PIV7 304 aa2.76□□□□□ -1.97
HMGCS1-207ENST00000514610 CLEC2AQ6UVW9 174 aa2.76□□□□□ -1.97
HMGCS1-207ENST00000514610 PP632Q6XCG6 107 aa2.76□□□□□ -1.97
HMGCS1-207ENST00000514610 NEGR1Q7Z3B1 354 aa2.76□□□□□ -1.97
HMGCS1-207ENST00000514610 HORMAD1Q86X24 394 aa2.76□□□□□ -1.97
HMGCS1-207ENST00000514610 OR5AR1Q8NGP9 310 aa2.76□□□□□ -1.97
HMGCS1-207ENST00000514610 SLC25A46Q96AG3 418 aa2.76□□□□□ -1.97
HMGCS1-207ENST00000514610 RMI2Q96E14 147 aa2.76□□□□□ -1.97
HMGCS1-207ENST00000514610 RTBDNQ9BSG5 229 aaPredicted RBP2.76□□□□□ -1.97
HMGCS1-207ENST00000514610 LYRM4Q9HD34 91 aa2.76□□□□□ -1.97
HMGCS1-207ENST00000514610 MYOZ1Q9NP98 299 aaPredicted RBP2.76□□□□□ -1.97
HMGCS1-207ENST00000514610 PDP1Q9P0J1 537 aaPredicted RBP2.76□□□□□ -1.97
HMGCS1-207ENST00000514610 UBIAD1Q9Y5Z9 338 aa2.76□□□□□ -1.97
HMGCS1-207ENST00000514610 COL27A1Q8IZC6 1860 aaPredicted RBP2.75□□□□□ -1.97
HMGCS1-207ENST00000514610 IGLV3-12A0A075B6K2 115 aa2.75□□□□□ -1.97
HMGCS1-207ENST00000514610 IGHV3-72A0A0B4J1Y9 119 aa2.75□□□□□ -1.97
HMGCS1-207ENST00000514610 BCKDKO14874 412 aa2.75□□□□□ -1.97
HMGCS1-207ENST00000514610 CHST10O43529 356 aa2.75□□□□□ -1.97
HMGCS1-207ENST00000514610 GLSO94925 669 aaPredicted RBP2.75□□□□□ -1.97
HMGCS1-207ENST00000514610 HLA-DQB1P01920 261 aa2.75□□□□□ -1.97
HMGCS1-207ENST00000514610 DCNP07585 359 aaKnown RBP2.75□□□□□ -1.97
HMGCS1-207ENST00000514610 ZNF688P0C7X2 276 aa2.75□□□□□ -1.97
HMGCS1-207ENST00000514610 GABRG2P18507 467 aa2.75□□□□□ -1.97
HMGCS1-207ENST00000514610 CD70P32970 193 aa2.75□□□□□ -1.97
HMGCS1-207ENST00000514610 POLR2IP36954 125 aaKnown RBP2.75□□□□□ -1.97
HMGCS1-207ENST00000514610 FABP6P51161 128 aa2.75□□□□□ -1.97
HMGCS1-207ENST00000514610 CYP24A1Q07973 514 aa2.75□□□□□ -1.97
HMGCS1-207ENST00000514610 PRSS8Q16651 343 aa2.75□□□□□ -1.97
HMGCS1-207ENST00000514610 TMEM256Q8N2U0 113 aa2.75□□□□□ -1.97
HMGCS1-207ENST00000514610 C8orf31Q8N9H6 132 aa2.75□□□□□ -1.97
HMGCS1-207ENST00000514610 BPIFCQ8NFQ6 507 aa2.75□□□□□ -1.97
HMGCS1-207ENST00000514610 OR10W1Q8NGF6 305 aa2.75□□□□□ -1.97
HMGCS1-207ENST00000514610 RNF157Q96PX1 679 aa2.75□□□□□ -1.97
HMGCS1-207ENST00000514610 ULBP2Q9BZM5 246 aa2.75□□□□□ -1.97
HMGCS1-207ENST00000514610 C1orf198Q9H425 327 aa2.75□□□□□ -1.97
HMGCS1-207ENST00000514610 ZNF442Q9H7R0 627 aa2.75□□□□□ -1.97
HMGCS1-207ENST00000514610 FBXO6Q9NRD1 293 aaPredicted RBP2.75□□□□□ -1.97
HMGCS1-207ENST00000514610 AHSPQ9NZD4 102 aa2.75□□□□□ -1.97
HMGCS1-207ENST00000514610 MYEF2Q9P2K5 600 aaKnown RBP2.75□□□□□ -1.97
HMGCS1-207ENST00000514610 IGKV1-27A0A075B6S5 117 aa2.74□□□□□ -1.97
HMGCS1-207ENST00000514610 TRAV25A0A0B4J276 109 aa2.74□□□□□ -1.97
HMGCS1-207ENST00000514610 IGHV3OR16-9A0A0B4J2B5 98 aa2.74□□□□□ -1.97
HMGCS1-207ENST00000514610 ME2P23368 584 aa2.74□□□□□ -1.97
HMGCS1-207ENST00000514610 PFN2P35080 140 aa2.74□□□□□ -1.97
HMGCS1-207ENST00000514610 CCNG1P51959 295 aa2.74□□□□□ -1.97
HMGCS1-207ENST00000514610 TAS2R46P59540 309 aa2.74□□□□□ -1.97
HMGCS1-207ENST00000514610 ZNF616Q08AN1 781 aa2.74□□□□□ -1.97
HMGCS1-207ENST00000514610 IL18Q14116 193 aa2.74□□□□□ -1.97
HMGCS1-207ENST00000514610 STUMQ69YW2 141 aa2.74□□□□□ -1.97
HMGCS1-207ENST00000514610 KATNAL2Q8IYT4 538 aa2.74□□□□□ -1.97
HMGCS1-207ENST00000514610 CSGALNACT2Q8N6G5 542 aa2.74□□□□□ -1.97
HMGCS1-207ENST00000514610 ZNF645Q8N7E2 425 aa2.74□□□□□ -1.97
HMGCS1-207ENST00000514610 TTLQ8NG68 377 aa2.74□□□□□ -1.97
HMGCS1-207ENST00000514610 OR51F2Q8NH61 342 aa2.74□□□□□ -1.97
HMGCS1-207ENST00000514610 ZNF721Q8TF20 911 aa2.74□□□□□ -1.97
HMGCS1-207ENST00000514610 SGTBQ96EQ0 304 aa2.74□□□□□ -1.97
HMGCS1-207ENST00000514610 BTN2A3PQ96KV6 586 aa2.74□□□□□ -1.97
HMGCS1-207ENST00000514610 CTRCQ99895 268 aa2.74□□□□□ -1.97
HMGCS1-207ENST00000514610 MTG1Q9BT17 334 aaPredicted RBP2.74□□□□□ -1.97
HMGCS1-207ENST00000514610 TMEM243Q9BU79 118 aa2.74□□□□□ -1.97
HMGCS1-207ENST00000514610 BRWD3Q6RI45 1802 aa2.74□□□□□ -1.97
HMGCS1-207ENST00000514610 TSPOAP1O95153 1857 aa2.73□□□□□ -1.97
HMGCS1-207ENST00000514610 IGHV7-4-1A0A0J9YVY3 117 aa2.73□□□□□ -1.97
HMGCS1-207ENST00000514610 ERI3O43414 337 aaKnown RBP2.73□□□□□ -1.97
HMGCS1-207ENST00000514610 TPM2P07951 284 aa2.73□□□□□ -1.97
HMGCS1-207ENST00000514610 UBCP0CG48 685 aaKnown RBP2.73□□□□□ -1.97
HMGCS1-207ENST00000514610 SIGLEC14Q08ET2 396 aa2.73□□□□□ -1.97
HMGCS1-207ENST00000514610 PIGHQ14442 188 aaPredicted RBP2.73□□□□□ -1.97
HMGCS1-207ENST00000514610 DNLZQ5SXM8 178 aa2.73□□□□□ -1.97
HMGCS1-207ENST00000514610 AP1ARQ63HQ0 302 aa2.73□□□□□ -1.97
HMGCS1-207ENST00000514610 MYOCDQ8IZQ8 938 aa2.73□□□□□ -1.97
HMGCS1-207ENST00000514610 GATSQ8NAP1 163 aa2.73□□□□□ -1.97
HMGCS1-207ENST00000514610 OR52K2Q8NGK3 314 aa2.73□□□□□ -1.97
HMGCS1-207ENST00000514610 OR10G6Q8NH81 332 aa2.73□□□□□ -1.97
HMGCS1-207ENST00000514610 TBL1YQ9BQ87 522 aa2.73□□□□□ -1.97
HMGCS1-207ENST00000514610 RSG1Q9BU20 258 aa2.73□□□□□ -1.97
HMGCS1-207ENST00000514610 OSBPL11Q9BXB4 747 aa2.73□□□□□ -1.97
HMGCS1-207ENST00000514610 PIGUQ9H490 435 aa2.73□□□□□ -1.97
HMGCS1-207ENST00000514610 RGS18Q9NS28 235 aa2.73□□□□□ -1.97
HMGCS1-207ENST00000514610 LRRIQ4A6NIV6 560 aa2.72□□□□□ -1.97
HMGCS1-207ENST00000514610 OR5H1A6NKK0 313 aa2.72□□□□□ -1.97
HMGCS1-207ENST00000514610 CASQ2O14958 399 aaPredicted RBP2.72□□□□□ -1.97
HMGCS1-207ENST00000514610 ZBTB5O15062 677 aa2.72□□□□□ -1.97
HMGCS1-207ENST00000514610 SERPINB7O75635 380 aa2.72□□□□□ -1.97
HMGCS1-207ENST00000514610 IGHV3-11P01762 117 aa2.72□□□□□ -1.97
HMGCS1-207ENST00000514610 IL4P05112 153 aa2.72□□□□□ -1.97
HMGCS1-207ENST00000514610 SCN1AP35498 2009 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms