RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 ASB17Q8WXJ9 295 aa11.87□□□□□ -0.51
USP46-209ENST00000514536 RDH5Q92781 318 aa11.87□□□□□ -0.51
USP46-209ENST00000514536 RDH12Q96NR8 316 aa11.87□□□□□ -0.51
USP46-209ENST00000514536 OR8B4Q96RC9 309 aa11.87□□□□□ -0.51
USP46-209ENST00000514536 SMR3AQ99954 134 aa11.87□□□□□ -0.51
USP46-209ENST00000514536 PIMREGQ9BSJ6 248 aa11.87□□□□□ -0.51
USP46-209ENST00000514536 REPIN1Q9BWE0 567 aaKnown RBP11.87□□□□□ -0.51
USP46-209ENST00000514536 SP140LQ9H930 580 aa11.87□□□□□ -0.51
USP46-209ENST00000514536 NKX1-2Q9UD57 310 aaPredicted RBP11.87□□□□□ -0.51
USP46-209ENST00000514536 LRP12Q9Y561 859 aa11.87□□□□□ -0.51
USP46-209ENST00000514536 ZNF469Q96JG9 3925 aaPredicted RBP11.87□□□□□ -0.51
USP46-209ENST00000514536 IQCF6A8MYZ5 107 aa11.86□□□□□ -0.51
USP46-209ENST00000514536 PRR32B1ATL7 298 aa11.86□□□□□ -0.51
USP46-209ENST00000514536 ZNF670-ZNF695F2Z2N8 137 aa11.86□□□□□ -0.51
USP46-209ENST00000514536 NDUFS8O00217 210 aa11.86□□□□□ -0.51
USP46-209ENST00000514536 MAGEB4O15481 346 aaPredicted RBP11.86□□□□□ -0.51
USP46-209ENST00000514536 LILRA1O75019 489 aa11.86□□□□□ -0.51
USP46-209ENST00000514536 ADH4P08319 380 aa11.86□□□□□ -0.51
USP46-209ENST00000514536 GABRB1P18505 474 aa11.86□□□□□ -0.51
USP46-209ENST00000514536 CXCR4P61073 352 aa11.86□□□□□ -0.51
USP46-209ENST00000514536 TNFAIP6P98066 277 aaPredicted RBP11.86□□□□□ -0.51
USP46-209ENST00000514536 POU4F2Q12837 409 aa11.86□□□□□ -0.51
USP46-209ENST00000514536 FAM209AQ5JX71 171 aa11.86□□□□□ -0.51
USP46-209ENST00000514536 OGFRL1Q5TC84 451 aaPredicted RBP11.86□□□□□ -0.51
USP46-209ENST00000514536 MEDAGQ5VYS4 303 aa11.86□□□□□ -0.51
USP46-209ENST00000514536 DEGS2Q6QHC5 323 aa11.86□□□□□ -0.51
USP46-209ENST00000514536 ZNF322Q6U7Q0 402 aaPredicted RBP11.86□□□□□ -0.51
USP46-209ENST00000514536 ENTHD1Q8IYW4 607 aa11.86□□□□□ -0.51
USP46-209ENST00000514536 PACRGLQ8N7B6 248 aa11.86□□□□□ -0.51
USP46-209ENST00000514536 YIPF5Q969M3 257 aa11.86□□□□□ -0.51
USP46-209ENST00000514536 SGK3Q96BR1 496 aa11.86□□□□□ -0.51
USP46-209ENST00000514536 PGAM5Q96HS1 289 aa11.86□□□□□ -0.51
USP46-209ENST00000514536 DIRC2Q96SL1 478 aa11.86□□□□□ -0.51
USP46-209ENST00000514536 MNTQ99583 582 aa11.86□□□□□ -0.51
USP46-209ENST00000514536 TBX5Q99593 518 aa11.86□□□□□ -0.51
USP46-209ENST00000514536 MROQ9BYG7 248 aa11.86□□□□□ -0.51
USP46-209ENST00000514536 GSX1Q9H4S2 264 aaPredicted RBP11.86□□□□□ -0.51
USP46-209ENST00000514536 NIPAL2Q9H841 368 aa11.86□□□□□ -0.51
USP46-209ENST00000514536 SAP30LQ9HAJ7 183 aa11.86□□□□□ -0.51
USP46-209ENST00000514536 C8orf4Q9NR00 106 aa11.86□□□□□ -0.51
USP46-209ENST00000514536 CLN6Q9NWW5 311 aa11.86□□□□□ -0.51
USP46-209ENST00000514536 ZNF319Q9P2F9 582 aa11.86□□□□□ -0.51
USP46-209ENST00000514536 IKZF2Q9UKS7 526 aa11.86□□□□□ -0.51
USP46-209ENST00000514536 GGT3PA6NGU5 568 aa11.85□□□□□ -0.51
USP46-209ENST00000514536 VWC2LB2RUY7 222 aa11.85□□□□□ -0.51
USP46-209ENST00000514536 CASQ2O14958 399 aaPredicted RBP11.85□□□□□ -0.51
USP46-209ENST00000514536 XRCC2O43543 280 aa11.85□□□□□ -0.51
USP46-209ENST00000514536 NR4A2P43354 598 aa11.85□□□□□ -0.51
USP46-209ENST00000514536 ROM1Q03395 351 aa11.85□□□□□ -0.51
USP46-209ENST00000514536 SLC34A1Q06495 639 aa11.85□□□□□ -0.51
USP46-209ENST00000514536 SPRNQ5BIV9 151 aa11.85□□□□□ -0.51
USP46-209ENST00000514536 ZNF679Q8IYX0 411 aa11.85□□□□□ -0.51
USP46-209ENST00000514536 OR52H1Q8NGJ2 320 aa11.85□□□□□ -0.51
USP46-209ENST00000514536 OR13G1Q8NGZ3 307 aa11.85□□□□□ -0.51
USP46-209ENST00000514536 RHOXF1Q8NHV9 184 aa11.85□□□□□ -0.51
USP46-209ENST00000514536 SPRYD4Q8WW59 207 aaPredicted RBP11.85□□□□□ -0.51
USP46-209ENST00000514536 ELMOD3Q96FG2 381 aa11.85□□□□□ -0.51
USP46-209ENST00000514536 APOL4Q9BPW4 351 aa11.85□□□□□ -0.51
USP46-209ENST00000514536 EGLN1Q9GZT9 426 aa11.85□□□□□ -0.51
USP46-209ENST00000514536 TMEM100Q9NV29 134 aa11.85□□□□□ -0.51
USP46-209ENST00000514536 TREM2Q9NZC2 230 aa11.85□□□□□ -0.51
USP46-209ENST00000514536 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.85□□□□□ -0.51
USP46-209ENST00000514536 ACANP16112 2415 aa11.85□□□□□ -0.51
USP46-209ENST00000514536 IGHV1-69-2A0A0G2JMI3 117 aa11.84□□□□□ -0.51
USP46-209ENST00000514536 CD300LBA8K4G0 201 aa11.84□□□□□ -0.51
USP46-209ENST00000514536 H0YL77 283 aa11.84□□□□□ -0.51
USP46-209ENST00000514536 PHYHO14832 338 aa11.84□□□□□ -0.51
USP46-209ENST00000514536 MPZL2O60487 215 aa11.84□□□□□ -0.51
USP46-209ENST00000514536 ZNF254O75437 659 aa11.84□□□□□ -0.51
USP46-209ENST00000514536 CD55P08174 381 aa11.84□□□□□ -0.51
USP46-209ENST00000514536 OR2T7P0C7T2 308 aa11.84□□□□□ -0.51
USP46-209ENST00000514536 ACHEP22303 614 aa11.84□□□□□ -0.51
USP46-209ENST00000514536 TNFSF4P23510 183 aa11.84□□□□□ -0.51
USP46-209ENST00000514536 GIFP27352 417 aa11.84□□□□□ -0.51
USP46-209ENST00000514536 CRYBB2P43320 205 aa11.84□□□□□ -0.51
USP46-209ENST00000514536 MTNR1AP48039 350 aa11.84□□□□□ -0.51
USP46-209ENST00000514536 PSMA6P60900 246 aaKnown RBP11.84□□□□□ -0.51
USP46-209ENST00000514536 MRPS11P82912 194 aaKnown RBP11.84□□□□□ -0.51
USP46-209ENST00000514536 RIN1Q13671 783 aa11.84□□□□□ -0.51
USP46-209ENST00000514536 TIGD6Q17RP2 521 aa11.84□□□□□ -0.51
USP46-209ENST00000514536 SSX6Q7RTT6 188 aa11.84□□□□□ -0.51
USP46-209ENST00000514536 DHRSXQ8N5I4 330 aa11.84□□□□□ -0.51
USP46-209ENST00000514536 ZNF540Q8NDQ6 660 aa11.84□□□□□ -0.51
USP46-209ENST00000514536 OR10H4Q8NGA5 316 aa11.84□□□□□ -0.51
USP46-209ENST00000514536 OR2T27Q8NH04 317 aa11.84□□□□□ -0.51
USP46-209ENST00000514536 CYGBQ8WWM9 190 aa11.84□□□□□ -0.51
USP46-209ENST00000514536 SPSB4Q96A44 273 aa11.84□□□□□ -0.51
USP46-209ENST00000514536 RNFT2Q96EX2 444 aa11.84□□□□□ -0.51
USP46-209ENST00000514536 SLC30A2Q9BRI3 323 aa11.84□□□□□ -0.51
USP46-209ENST00000514536 BPESC1Q9GZL8 116 aa11.84□□□□□ -0.51
USP46-209ENST00000514536 OR10A2Q9H208 303 aa11.84□□□□□ -0.51
USP46-209ENST00000514536 CHODLQ9H9P2 273 aa11.84□□□□□ -0.51
USP46-209ENST00000514536 ZNF275Q9NSD4 429 aaPredicted RBP11.84□□□□□ -0.51
USP46-209ENST00000514536 CACNG2Q9Y698 323 aa11.84□□□□□ -0.51
USP46-209ENST00000514536 A0A096LNT2 108 aa11.84□□□□□ -0.51
USP46-209ENST00000514536 TMEM269A0A1B0GVZ9 245 aa11.84□□□□□ -0.51
USP46-209ENST00000514536 A0A1W2PQL4 384 aaPredicted RBP11.84□□□□□ -0.51
USP46-209ENST00000514536 SNTNA6NMZ2 147 aa11.84□□□□□ -0.51
USP46-209ENST00000514536 CLIC3O95833 236 aa11.84□□□□□ -0.51
USP46-209ENST00000514536 HLA-DPB1P04440 258 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms